RNA–Protein interactions for RNA: ENST00000527739.5

CAPN1-211, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-211ENST00000527739 ECE1P42892 770 aa24.37■■□□□ 1.49
CAPN1-211ENST00000527739 CCDC57Q2TAC2 916 aa24.37■■□□□ 1.49
CAPN1-211ENST00000527739 EPHA10Q5JZY3 1008 aa24.37■■□□□ 1.49
CAPN1-211ENST00000527739 RSBN1LQ6PCB5 846 aaPredicted RBP24.37■■□□□ 1.49
CAPN1-211ENST00000527739 CDC37L1Q7L3B6 337 aa24.37■■□□□ 1.49
CAPN1-211ENST00000527739 USP17L1Q7RTZ2 530 aa24.37■■□□□ 1.49
CAPN1-211ENST00000527739 USP48Q86UV5 1035 aa24.37■■□□□ 1.49
CAPN1-211ENST00000527739 ZNF804BA4D1E1 1349 aa24.36■■□□□ 1.49
CAPN1-211ENST00000527739 EGFRP00533 1210 aa24.36■■□□□ 1.49
CAPN1-211ENST00000527739 CHRNDQ07001 517 aa24.36■■□□□ 1.49
CAPN1-211ENST00000527739 DLK2Q6UY11 383 aa24.36■■□□□ 1.49
CAPN1-211ENST00000527739 SAPCD2Q86UD0 394 aa24.36■■□□□ 1.49
CAPN1-211ENST00000527739 HELBQ8NG08 1087 aaPredicted RBP24.36■■□□□ 1.49
CAPN1-211ENST00000527739 TSKSQ9UJT2 592 aa24.36■■□□□ 1.49
CAPN1-211ENST00000527739 MED23Q9ULK4 1368 aa24.35■■□□□ 1.49
CAPN1-211ENST00000527739 KIF4BQ2VIQ3 1234 aa24.35■■□□□ 1.49
CAPN1-211ENST00000527739 AGBL3Q8NEM8 1001 aa24.35■■□□□ 1.49
CAPN1-211ENST00000527739 PLIN1O60240 522 aa24.34■■□□□ 1.49
CAPN1-211ENST00000527739 TAF5LO75529 589 aa24.34■■□□□ 1.49
CAPN1-211ENST00000527739 TXNRD3Q86VQ6 643 aa24.34■■□□□ 1.49
CAPN1-211ENST00000527739 DCPSQ96C86 337 aaKnown RBP24.34■■□□□ 1.49
CAPN1-211ENST00000527739 ABHD8Q96I13 439 aa24.34■■□□□ 1.49
CAPN1-211ENST00000527739 ZNF594Q96JF6 807 aaPredicted RBP24.34■■□□□ 1.49
CAPN1-211ENST00000527739 COA1Q9GZY4 146 aa24.34■■□□□ 1.49
CAPN1-211ENST00000527739 CACNA1FO60840 1977 aa24.33■■□□□ 1.49
CAPN1-211ENST00000527739 SUCLG2Q96I99 432 aa24.33■■□□□ 1.49
CAPN1-211ENST00000527739 SMC4Q9NTJ3 1288 aa24.33■■□□□ 1.49
CAPN1-211ENST00000527739 PTPRCP08575 1304 aa24.33■■□□□ 1.48
CAPN1-211ENST00000527739 USP17L8P0C7I0 530 aa24.32■■□□□ 1.48
CAPN1-211ENST00000527739 KLRK1P26718 216 aa24.32■■□□□ 1.48
CAPN1-211ENST00000527739 LDHAL6AQ6ZMR3 332 aa24.32■■□□□ 1.48
CAPN1-211ENST00000527739 KRT26Q7Z3Y9 468 aa24.32■■□□□ 1.48
CAPN1-211ENST00000527739 CNNM1Q9NRU3 951 aa24.32■■□□□ 1.48
CAPN1-211ENST00000527739 SNAP23O00161 211 aa24.31■■□□□ 1.48
CAPN1-211ENST00000527739 NBPF7P0C2Y1 421 aaPredicted RBP24.31■■□□□ 1.48
CAPN1-211ENST00000527739 BEGAINQ9BUH8 593 aa24.31■■□□□ 1.48
CAPN1-211ENST00000527739 MXD3Q9BW11 206 aa24.31■■□□□ 1.48
CAPN1-211ENST00000527739 MAP2K2P36507 400 aa24.3■■□□□ 1.48
CAPN1-211ENST00000527739 ALDH1L2Q3SY69 923 aa24.3■■□□□ 1.48
CAPN1-211ENST00000527739 SCARF1Q14162 830 aa24.29■■□□□ 1.48
CAPN1-211ENST00000527739 MYH3P11055 1940 aa24.29■■□□□ 1.48
CAPN1-211ENST00000527739 ADM5C9JUS6 153 aa24.28■■□□□ 1.48
CAPN1-211ENST00000527739 ZNF280AP59817 542 aaPredicted RBP24.28■■□□□ 1.48
CAPN1-211ENST00000527739 TTLL5Q6EMB2 1281 aa24.28■■□□□ 1.48
CAPN1-211ENST00000527739 TRMT2AQ8IZ69 625 aaKnown RBP24.28■■□□□ 1.48
CAPN1-211ENST00000527739 ZIC5Q96T25 663 aa24.28■■□□□ 1.48
CAPN1-211ENST00000527739 GMLQ99445 158 aa24.28■■□□□ 1.48
CAPN1-211ENST00000527739 MYOZ2Q9NPC6 264 aa24.28■■□□□ 1.48
CAPN1-211ENST00000527739 GGA3Q9NZ52 723 aa24.28■■□□□ 1.48
CAPN1-211ENST00000527739 ASTN2O75129 1339 aaPredicted RBP24.28■■□□□ 1.48
CAPN1-211ENST00000527739 GTF2IP78347 998 aa24.27■■□□□ 1.48
CAPN1-211ENST00000527739 DACT2Q5SW24 774 aa24.27■■□□□ 1.48
CAPN1-211ENST00000527739 STRIP1Q5VSL9 837 aa24.27■■□□□ 1.48
CAPN1-211ENST00000527739 SULF1Q8IWU6 871 aa24.27■■□□□ 1.48
CAPN1-211ENST00000527739 OGFOD1Q8N543 542 aa24.27■■□□□ 1.48
CAPN1-211ENST00000527739 HHIPL1Q96JK4 782 aa24.27■■□□□ 1.48
CAPN1-211ENST00000527739 BICC1Q9H694 974 aaKnown RBP24.27■■□□□ 1.48
CAPN1-211ENST00000527739 DIEXFQ68CQ4 756 aaKnown RBP24.26■■□□□ 1.47
CAPN1-211ENST00000527739 KAZALD1Q96I82 304 aa24.26■■□□□ 1.47
CAPN1-211ENST00000527739 SPEF2Q9C093 1822 aa24.26■■□□□ 1.47
CAPN1-211ENST00000527739 ANGEL2Q5VTE6 544 aaKnown RBP24.25■■□□□ 1.47
CAPN1-211ENST00000527739 MIER1Q8N108 512 aa24.25■■□□□ 1.47
CAPN1-211ENST00000527739 CD209Q9NNX6 404 aa24.25■■□□□ 1.47
CAPN1-211ENST00000527739 SCN9AQ15858 1988 aa24.24■■□□□ 1.47
CAPN1-211ENST00000527739 ZNF804AQ7Z570 1209 aa24.24■■□□□ 1.47
CAPN1-211ENST00000527739 PUS3Q9BZE2 481 aaKnown RBP24.24■■□□□ 1.47
CAPN1-211ENST00000527739 NOB1Q9ULX3 412 aaKnown RBP24.24■■□□□ 1.47
CAPN1-211ENST00000527739 UTYO14607 1347 aa24.24■■□□□ 1.47
CAPN1-211ENST00000527739 CT47B1P0C2W7 299 aaPredicted RBP24.23■■□□□ 1.47
CAPN1-211ENST00000527739 MYO3BQ8WXR4 1341 aa24.23■■□□□ 1.47
CAPN1-211ENST00000527739 BRPF1P55201 1214 aaPredicted RBP24.22■■□□□ 1.47
CAPN1-211ENST00000527739 HUNKP57058 714 aa24.22■■□□□ 1.47
CAPN1-211ENST00000527739 KIAA0825Q8IV33 1275 aa24.22■■□□□ 1.47
CAPN1-211ENST00000527739 C2orf69Q8N8R5 385 aa24.22■■□□□ 1.47
CAPN1-211ENST00000527739 USP44Q9H0E7 712 aa24.22■■□□□ 1.47
CAPN1-211ENST00000527739 GBA2Q9HCG7 927 aaPredicted RBP24.21■■□□□ 1.47
CAPN1-211ENST00000527739 HDAC9Q9UKV0 1011 aa24.21■■□□□ 1.47
CAPN1-211ENST00000527739 SCAF8Q9UPN6 1271 aaKnown RBP24.21■■□□□ 1.47
CAPN1-211ENST00000527739 POLR2AP24928 1970 aaKnown RBP24.21■■□□□ 1.47
CAPN1-211ENST00000527739 CCDC85CA6NKD9 419 aa24.2■■□□□ 1.46
CAPN1-211ENST00000527739 NBPF9Q3BBW0 867 aa24.2■■□□□ 1.46
CAPN1-211ENST00000527739 C15orf52Q6ZUT6 534 aaKnown RBP24.2■■□□□ 1.46
CAPN1-211ENST00000527739 ANKRD44Q8N8A2 993 aa24.2■■□□□ 1.46
CAPN1-211ENST00000527739 ZNF609O15014 1411 aa24.19■■□□□ 1.46
CAPN1-211ENST00000527739 RABL6Q3YEC7 729 aaPredicted RBP24.19■■□□□ 1.46
CAPN1-211ENST00000527739 CDCA5Q96FF9 252 aa24.19■■□□□ 1.46
CAPN1-211ENST00000527739 API5Q9BZZ5 524 aaKnown RBP24.19■■□□□ 1.46
CAPN1-211ENST00000527739 JAG2Q9Y219 1238 aa24.19■■□□□ 1.46
CAPN1-211ENST00000527739 METTL24Q5JXM2 366 aa24.18■■□□□ 1.46
CAPN1-211ENST00000527739 CASP8AP2Q9UKL3 1982 aa24.18■■□□□ 1.46
CAPN1-211ENST00000527739 MROH5Q6ZUA9 1318 aa24.17■■□□□ 1.46
CAPN1-211ENST00000527739 IRS2Q9Y4H2 1338 aa24.17■■□□□ 1.46
CAPN1-211ENST00000527739 FAM155AB1AL88 458 aaPredicted RBP24.17■■□□□ 1.46
CAPN1-211ENST00000527739 F8W031 263 aaPredicted RBP24.17■■□□□ 1.46
CAPN1-211ENST00000527739 CA12O43570 354 aa24.17■■□□□ 1.46
CAPN1-211ENST00000527739 SASH1O94885 1247 aa24.17■■□□□ 1.46
CAPN1-211ENST00000527739 RARSP54136 660 aaKnown RBP24.17■■□□□ 1.46
CAPN1-211ENST00000527739 NOGQ13253 232 aa24.17■■□□□ 1.46
CAPN1-211ENST00000527739 UBE4AQ14139 1066 aa24.17■■□□□ 1.46
CAPN1-211ENST00000527739 LRRC24Q50LG9 513 aa24.17■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms