RNA–Protein interactions for RNA: ENST00000527649.1

SORL1-205, Transcript of sortilin related receptor 1, humanhuman

TSL 2

Gene SORL1, Length 1,765 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORL1-205ENST00000527649 TRIM6-TRIM34B2RNG4 842 aa16.53■□□□□ 0.24
SORL1-205ENST00000527649 BCAMP50895 628 aa16.53■□□□□ 0.24
SORL1-205ENST00000527649 SCARF1Q14162 830 aa16.53■□□□□ 0.24
SORL1-205ENST00000527649 CCDC158Q5M9N0 1113 aa16.53■□□□□ 0.24
SORL1-205ENST00000527649 CCDC102BQ68D86 513 aa16.53■□□□□ 0.24
SORL1-205ENST00000527649 TMC4Q7Z404 712 aa16.53■□□□□ 0.24
SORL1-205ENST00000527649 CNKSR1Q969H4 720 aa16.53■□□□□ 0.24
SORL1-205ENST00000527649 EDC3Q96F86 508 aaKnown RBP16.53■□□□□ 0.24
SORL1-205ENST00000527649 SPON1Q9HCB6 807 aa16.53■□□□□ 0.24
SORL1-205ENST00000527649 ZNF219Q9P2Y4 722 aaPredicted RBP16.53■□□□□ 0.24
SORL1-205ENST00000527649 LTBP1Q14766 1721 aa16.52■□□□□ 0.24
SORL1-205ENST00000527649 GYG1P46976 350 aa16.52■□□□□ 0.24
SORL1-205ENST00000527649 TTC39AQ5SRH9 613 aa16.52■□□□□ 0.24
SORL1-205ENST00000527649 TXNRD3Q86VQ6 643 aa16.52■□□□□ 0.24
SORL1-205ENST00000527649 RILPL2Q969X0 211 aa16.52■□□□□ 0.24
SORL1-205ENST00000527649 WWC3Q9ULE0 1092 aa16.52■□□□□ 0.24
SORL1-205ENST00000527649 IRS2Q9Y4H2 1338 aa16.52■□□□□ 0.24
SORL1-205ENST00000527649 PI16Q6UXB8 463 aa16.51■□□□□ 0.23
SORL1-205ENST00000527649 DNAJC2Q99543 621 aaKnown RBP16.51■□□□□ 0.23
SORL1-205ENST00000527649 PODXL2Q9NZ53 605 aa16.51■□□□□ 0.23
SORL1-205ENST00000527649 POLLQ9UGP5 575 aa16.51■□□□□ 0.23
SORL1-205ENST00000527649 UFL1O94874 794 aa16.51■□□□□ 0.23
SORL1-205ENST00000527649 TGFB2P61812 414 aa16.51■□□□□ 0.23
SORL1-205ENST00000527649 TBC1D16Q8TBP0 767 aa16.51■□□□□ 0.23
SORL1-205ENST00000527649 C7orf43Q8WVR3 580 aa16.51■□□□□ 0.23
SORL1-205ENST00000527649 FAM84BQ96KN1 310 aaPredicted RBP16.51■□□□□ 0.23
SORL1-205ENST00000527649 HAUS7Q99871 368 aa16.51■□□□□ 0.23
SORL1-205ENST00000527649 SNRKQ9NRH2 765 aa16.51■□□□□ 0.23
SORL1-205ENST00000527649 LEMD3Q9Y2U8 911 aa16.51■□□□□ 0.23
SORL1-205ENST00000527649 DUOX1Q9NRD9 1551 aa16.5■□□□□ 0.23
SORL1-205ENST00000527649 MCAMP43121 646 aa16.5■□□□□ 0.23
SORL1-205ENST00000527649 TTLL6Q8N841 843 aa16.5■□□□□ 0.23
SORL1-205ENST00000527649 GGA1Q9UJY5 639 aa16.5■□□□□ 0.23
SORL1-205ENST00000527649 CD2APQ9Y5K6 639 aa16.5■□□□□ 0.23
SORL1-205ENST00000527649 ARID4AP29374 1257 aaPredicted RBP16.49■□□□□ 0.23
SORL1-205ENST00000527649 BACH2Q9BYV9 841 aa16.49■□□□□ 0.23
SORL1-205ENST00000527649 IQSEC3Q9UPP2 1182 aaPredicted RBP16.49■□□□□ 0.23
SORL1-205ENST00000527649 AKAP11Q9UKA4 1901 aa16.49■□□□□ 0.23
SORL1-205ENST00000527649 C21orf2O43822 256 aa16.49■□□□□ 0.23
SORL1-205ENST00000527649 ATP2B4P23634 1241 aa16.49■□□□□ 0.23
SORL1-205ENST00000527649 RASGRF1Q13972 1273 aa16.49■□□□□ 0.23
SORL1-205ENST00000527649 TBC1D9Q6ZT07 1266 aa16.49■□□□□ 0.23
SORL1-205ENST00000527649 CNTROBQ8N137 903 aa16.49■□□□□ 0.23
SORL1-205ENST00000527649 MPNDQ8N594 471 aa16.49■□□□□ 0.23
SORL1-205ENST00000527649 NLGN2Q8NFZ4 835 aa16.49■□□□□ 0.23
SORL1-205ENST00000527649 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.49■□□□□ 0.23
SORL1-205ENST00000527649 ZNF512BQ96KM6 892 aaPredicted RBP16.49■□□□□ 0.23
SORL1-205ENST00000527649 GOLIM4O00461 696 aa16.48■□□□□ 0.23
SORL1-205ENST00000527649 FKBP4Q02790 459 aaKnown RBP eCLIP16.48■□□□□ 0.23
SORL1-205ENST00000527649 DPP8Q6V1X1 898 aaPredicted RBP16.48■□□□□ 0.23
SORL1-205ENST00000527649 FBXO33Q7Z6M2 555 aa16.48■□□□□ 0.23
SORL1-205ENST00000527649 ANTXR1Q9H6X2 564 aa16.48■□□□□ 0.23
SORL1-205ENST00000527649 AK9Q5TCS8 1911 aa16.48■□□□□ 0.23
SORL1-205ENST00000527649 SNED1Q8TER0 1413 aa16.47■□□□□ 0.23
SORL1-205ENST00000527649 C6orf229H3BNL8 230 aa16.47■□□□□ 0.23
SORL1-205ENST00000527649 CDC45O75419 566 aa16.47■□□□□ 0.23
SORL1-205ENST00000527649 ZAP70P43403 619 aa16.47■□□□□ 0.23
SORL1-205ENST00000527649 CAVIN4Q5BKX8 364 aa16.47■□□□□ 0.23
SORL1-205ENST00000527649 VPS37DQ86XT2 251 aa16.47■□□□□ 0.23
SORL1-205ENST00000527649 EVI5LQ96CN4 794 aa16.47■□□□□ 0.23
SORL1-205ENST00000527649 PAG1Q9NWQ8 432 aa16.47■□□□□ 0.23
SORL1-205ENST00000527649 HMG20BQ9P0W2 317 aa16.47■□□□□ 0.23
SORL1-205ENST00000527649 PIM2Q9P1W9 311 aa16.47■□□□□ 0.23
SORL1-205ENST00000527649 COL1A1P02452 1464 aaPredicted RBP16.47■□□□□ 0.23
SORL1-205ENST00000527649 BRCA1P38398 1863 aaKnown RBP16.47■□□□□ 0.23
SORL1-205ENST00000527649 SEC24BO95487 1268 aa16.46■□□□□ 0.23
SORL1-205ENST00000527649 UQCRFS1P1P0C7P4 283 aa16.46■□□□□ 0.23
SORL1-205ENST00000527649 HIBADHP31937 336 aaKnown RBP16.46■□□□□ 0.23
SORL1-205ENST00000527649 TMX4Q9H1E5 349 aaPredicted RBP16.46■□□□□ 0.23
SORL1-205ENST00000527649 SPATA5Q8NB90 893 aa16.46■□□□□ 0.22
SORL1-205ENST00000527649 CHGBP05060 677 aa16.45■□□□□ 0.22
SORL1-205ENST00000527649 C15orf52Q6ZUT6 534 aaKnown RBP16.45■□□□□ 0.22
SORL1-205ENST00000527649 MED23Q9ULK4 1368 aa16.45■□□□□ 0.22
SORL1-205ENST00000527649 SOCS7O14512 581 aa16.44■□□□□ 0.22
SORL1-205ENST00000527649 RIMBP2O15034 1052 aa16.44■□□□□ 0.22
SORL1-205ENST00000527649 CYP2E1P05181 493 aaPredicted RBP16.44■□□□□ 0.22
SORL1-205ENST00000527649 CHMLP26374 656 aa16.44■□□□□ 0.22
SORL1-205ENST00000527649 DALRD3Q5D0E6 543 aaKnown RBP16.44■□□□□ 0.22
SORL1-205ENST00000527649 FSD1Q9BTV5 496 aa16.44■□□□□ 0.22
SORL1-205ENST00000527649 FHDC1Q9C0D6 1143 aaPredicted RBP16.44■□□□□ 0.22
SORL1-205ENST00000527649 GNL3LQ9NVN8 582 aaKnown RBP16.44■□□□□ 0.22
SORL1-205ENST00000527649 ZNF804AQ7Z570 1209 aa16.43■□□□□ 0.22
SORL1-205ENST00000527649 KBTBD3Q8NAB2 608 aa16.43■□□□□ 0.22
SORL1-205ENST00000527649 RTFDC1Q9BY42 306 aaPredicted RBP16.43■□□□□ 0.22
SORL1-205ENST00000527649 IL25Q9H293 177 aa16.43■□□□□ 0.22
SORL1-205ENST00000527649 PIH1D3Q9NQM4 214 aaKnown RBP16.43■□□□□ 0.22
SORL1-205ENST00000527649 JAG2Q9Y219 1238 aa16.43■□□□□ 0.22
SORL1-205ENST00000527649 SLFNL1Q499Z3 407 aa16.42■□□□□ 0.22
SORL1-205ENST00000527649 CCDC93Q567U6 631 aa16.42■□□□□ 0.22
SORL1-205ENST00000527649 CC2D2BQ6DHV5 1058 aa16.42■□□□□ 0.22
SORL1-205ENST00000527649 MYO5AQ9Y4I1 1855 aaKnown RBP16.42■□□□□ 0.22
SORL1-205ENST00000527649 FRAT2O75474 233 aaPredicted RBP16.41■□□□□ 0.22
SORL1-205ENST00000527649 WASHC4Q2M389 1173 aa16.41■□□□□ 0.22
SORL1-205ENST00000527649 CD209Q9NNX6 404 aa16.41■□□□□ 0.22
SORL1-205ENST00000527649 BCS1LQ9Y276 419 aa16.41■□□□□ 0.22
SORL1-205ENST00000527649 TDRD7Q8NHU6 1098 aaKnown RBP16.41■□□□□ 0.22
SORL1-205ENST00000527649 FAM227BQ96M60 508 aa16.41■□□□□ 0.22
SORL1-205ENST00000527649 ZC3H12CQ9C0D7 883 aaKnown RBP16.41■□□□□ 0.22
SORL1-205ENST00000527649 DENND2AQ9ULE3 1009 aa16.41■□□□□ 0.22
SORL1-205ENST00000527649 MYH13Q9UKX3 1938 aa16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms