RNA–Protein interactions for RNA: ENST00000527644.1

TSPAN4-217, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 968 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-217ENST00000527644 UBTFL1P0CB47 393 aaPredicted RBP33.07■■■□□ 2.88
TSPAN4-217ENST00000527644 HIRAP54198 1017 aaPredicted RBP33.07■■■□□ 2.88
TSPAN4-217ENST00000527644 INTS3Q68E01 1043 aaKnown RBP33.07■■■□□ 2.88
TSPAN4-217ENST00000527644 TRPM4Q8TD43 1214 aa33.07■■■□□ 2.88
TSPAN4-217ENST00000527644 PGAP2Q9UHJ9 254 aa33.07■■■□□ 2.88
TSPAN4-217ENST00000527644 HDAC5Q9UQL6 1122 aa33.07■■■□□ 2.88
TSPAN4-217ENST00000527644 ZNF609O15014 1411 aa33.07■■■□□ 2.88
TSPAN4-217ENST00000527644 PUS3Q9BZE2 481 aaKnown RBP33.06■■■□□ 2.88
TSPAN4-217ENST00000527644 PSME4Q14997 1843 aa33.06■■■□□ 2.88
TSPAN4-217ENST00000527644 SNAP23O00161 211 aa33.05■■■□□ 2.88
TSPAN4-217ENST00000527644 PLIN1O60240 522 aa33.05■■■□□ 2.88
TSPAN4-217ENST00000527644 ATF7IPQ6VMQ6 1270 aa33.05■■■□□ 2.88
TSPAN4-217ENST00000527644 FRAT1Q92837 279 aaPredicted RBP33.05■■■□□ 2.88
TSPAN4-217ENST00000527644 KLRG1Q96E93 195 aa33.05■■■□□ 2.88
TSPAN4-217ENST00000527644 RIPOR2Q9Y4F9 1068 aa33.05■■■□□ 2.88
TSPAN4-217ENST00000527644 IRS2Q9Y4H2 1338 aa33.04■■■□□ 2.88
TSPAN4-217ENST00000527644 A0A1B0GUL6 1792 aa33.04■■■□□ 2.88
TSPAN4-217ENST00000527644 SAMD7Q7Z3H4 446 aa33.04■■■□□ 2.88
TSPAN4-217ENST00000527644 MROH5Q6ZUA9 1318 aa33.03■■■□□ 2.88
TSPAN4-217ENST00000527644 TRIM27P14373 513 aa33.03■■■□□ 2.88
TSPAN4-217ENST00000527644 STRIP1Q5VSL9 837 aa33.03■■■□□ 2.88
TSPAN4-217ENST00000527644 GMLQ99445 158 aa33.03■■■□□ 2.88
TSPAN4-217ENST00000527644 TMEM88BA6NKF7 163 aa33.02■■■□□ 2.88
TSPAN4-217ENST00000527644 TBC1D10BQ4KMP7 808 aaPredicted RBP33.02■■■□□ 2.88
TSPAN4-217ENST00000527644 CD209Q9NNX6 404 aa33.02■■■□□ 2.88
TSPAN4-217ENST00000527644 UBE4AQ14139 1066 aa33.01■■■□□ 2.87
TSPAN4-217ENST00000527644 DACT2Q5SW24 774 aa33.01■■■□□ 2.87
TSPAN4-217ENST00000527644 ZNF280AP59817 542 aaPredicted RBP33■■■□□ 2.87
TSPAN4-217ENST00000527644 USP17L8P0C7I0 530 aa32.99■■■□□ 2.87
TSPAN4-217ENST00000527644 LRRC24Q50LG9 513 aa32.99■■■□□ 2.87
TSPAN4-217ENST00000527644 RBM26Q5T8P6 1007 aaKnown RBP32.99■■■□□ 2.87
TSPAN4-217ENST00000527644 ZKSCAN2Q63HK3 967 aa32.99■■■□□ 2.87
TSPAN4-217ENST00000527644 TTLL5Q6EMB2 1281 aa32.99■■■□□ 2.87
TSPAN4-217ENST00000527644 ZNF804AQ7Z570 1209 aa32.99■■■□□ 2.87
TSPAN4-217ENST00000527644 FBXW7Q969H0 707 aa32.99■■■□□ 2.87
TSPAN4-217ENST00000527644 MEIS3Q99687 375 aa32.99■■■□□ 2.87
TSPAN4-217ENST00000527644 MYO3BQ8WXR4 1341 aa32.99■■■□□ 2.87
TSPAN4-217ENST00000527644 EGFRP00533 1210 aa32.98■■■□□ 2.87
TSPAN4-217ENST00000527644 RFX5P48382 616 aaPredicted RBP32.98■■■□□ 2.87
TSPAN4-217ENST00000527644 KLHDC4Q8TBB5 520 aa32.98■■■□□ 2.87
TSPAN4-217ENST00000527644 GNAI3P08754 354 aa32.97■■■□□ 2.87
TSPAN4-217ENST00000527644 KIF4BQ2VIQ3 1234 aa32.97■■■□□ 2.87
TSPAN4-217ENST00000527644 LRRFIP2Q9Y608 721 aaKnown RBP32.97■■■□□ 2.87
TSPAN4-217ENST00000527644 IL1R1P14778 569 aa32.96■■■□□ 2.87
TSPAN4-217ENST00000527644 METTL24Q5JXM2 366 aa32.96■■■□□ 2.87
TSPAN4-217ENST00000527644 CDC37L1Q7L3B6 337 aa32.96■■■□□ 2.87
TSPAN4-217ENST00000527644 TNNQ9UQP3 1299 aa32.96■■■□□ 2.87
TSPAN4-217ENST00000527644 GTF2IP78347 998 aa32.95■■■□□ 2.87
TSPAN4-217ENST00000527644 CLUAP1Q96AJ1 413 aa32.95■■■□□ 2.87
TSPAN4-217ENST00000527644 MXD3Q9BW11 206 aa32.95■■■□□ 2.87
TSPAN4-217ENST00000527644 TRAF5O00463 557 aa32.94■■■□□ 2.86
TSPAN4-217ENST00000527644 MMP14P50281 582 aa32.94■■■□□ 2.86
TSPAN4-217ENST00000527644 PTPN12Q05209 780 aaKnown RBP32.94■■■□□ 2.86
TSPAN4-217ENST00000527644 JMYQ8N9B5 988 aa32.94■■■□□ 2.86
TSPAN4-217ENST00000527644 GLIS2Q9BZE0 524 aaPredicted RBP32.94■■■□□ 2.86
TSPAN4-217ENST00000527644 PDE8BO95263 885 aa32.93■■■□□ 2.86
TSPAN4-217ENST00000527644 FMR1Q06787 632 aaKnown RBP eCLIP32.93■■■□□ 2.86
TSPAN4-217ENST00000527644 MYOZ2Q9NPC6 264 aa32.93■■■□□ 2.86
TSPAN4-217ENST00000527644 EYA2O00167 538 aa32.92■■■□□ 2.86
TSPAN4-217ENST00000527644 OGFOD1Q8N543 542 aa32.92■■■□□ 2.86
TSPAN4-217ENST00000527644 VGLL2Q8N8G2 317 aa32.92■■■□□ 2.86
TSPAN4-217ENST00000527644 ZNF646O15015 1829 aaPredicted RBP32.92■■■□□ 2.86
TSPAN4-217ENST00000527644 DCPSQ96C86 337 aaKnown RBP32.91■■■□□ 2.86
TSPAN4-217ENST00000527644 FBXO3Q9UK99 471 aa32.91■■■□□ 2.86
TSPAN4-217ENST00000527644 HIBADHP31937 336 aaKnown RBP32.9■■■□□ 2.86
TSPAN4-217ENST00000527644 FAM84BQ96KN1 310 aaPredicted RBP32.9■■■□□ 2.86
TSPAN4-217ENST00000527644 MKRN1Q9UHC7 482 aaKnown RBP32.9■■■□□ 2.86
TSPAN4-217ENST00000527644 CST9Q5W186 159 aa32.89■■■□□ 2.86
TSPAN4-217ENST00000527644 USP48Q86UV5 1035 aa32.89■■■□□ 2.86
TSPAN4-217ENST00000527644 CNTNAP1P78357 1384 aa32.88■■■□□ 2.85
TSPAN4-217ENST00000527644 SASH1O94885 1247 aa32.88■■■□□ 2.85
TSPAN4-217ENST00000527644 GYG1P46976 350 aa32.88■■■□□ 2.85
TSPAN4-217ENST00000527644 SCARF1Q14162 830 aa32.88■■■□□ 2.85
TSPAN4-217ENST00000527644 KRT26Q7Z3Y9 468 aa32.88■■■□□ 2.85
TSPAN4-217ENST00000527644 TMEM57Q8N5G2 664 aa32.88■■■□□ 2.85
TSPAN4-217ENST00000527644 TRPM7Q96QT4 1865 aa32.88■■■□□ 2.85
TSPAN4-217ENST00000527644 CIAO1O76071 339 aa32.87■■■□□ 2.85
TSPAN4-217ENST00000527644 FKBP1AP62942 108 aaKnown RBP32.87■■■□□ 2.85
TSPAN4-217ENST00000527644 TDRD7Q8NHU6 1098 aaKnown RBP32.87■■■□□ 2.85
TSPAN4-217ENST00000527644 HDAC9Q9UKV0 1011 aa32.87■■■□□ 2.85
TSPAN4-217ENST00000527644 ABT1Q9ULW3 272 aaKnown RBP32.87■■■□□ 2.85
TSPAN4-217ENST00000527644 PUM3Q15397 648 aaKnown RBP32.86■■■□□ 2.85
TSPAN4-217ENST00000527644 ATG9AQ7Z3C6 839 aa32.86■■■□□ 2.85
TSPAN4-217ENST00000527644 KIAA0825Q8IV33 1275 aa32.86■■■□□ 2.85
TSPAN4-217ENST00000527644 FTSJ3Q8IY81 847 aaKnown RBP32.86■■■□□ 2.85
TSPAN4-217ENST00000527644 GGA3Q9NZ52 723 aa32.86■■■□□ 2.85
TSPAN4-217ENST00000527644 RASSF10A6NK89 507 aa32.85■■■□□ 2.85
TSPAN4-217ENST00000527644 CELF2O95319 508 aaKnown RBP32.85■■■□□ 2.85
TSPAN4-217ENST00000527644 GNAI2P04899 355 aa32.85■■■□□ 2.85
TSPAN4-217ENST00000527644 CAVIN4Q5BKX8 364 aa32.85■■■□□ 2.85
TSPAN4-217ENST00000527644 FBXO33Q7Z6M2 555 aa32.85■■■□□ 2.85
TSPAN4-217ENST00000527644 DZIP1LQ8IYY4 767 aaKnown RBP32.85■■■□□ 2.85
TSPAN4-217ENST00000527644 COPRSQ9NQ92 184 aa32.85■■■□□ 2.85
TSPAN4-217ENST00000527644 FAM205AQ6ZU69 1335 aa32.84■■■□□ 2.85
TSPAN4-217ENST00000527644 MTX1Q13505 466 aa32.84■■■□□ 2.85
TSPAN4-217ENST00000527644 DEFB115Q30KQ5 88 aa32.84■■■□□ 2.85
TSPAN4-217ENST00000527644 VPS37DQ86XT2 251 aa32.84■■■□□ 2.85
TSPAN4-217ENST00000527644 CERS5Q8N5B7 392 aa32.84■■■□□ 2.85
TSPAN4-217ENST00000527644 SIL1Q9H173 461 aa32.84■■■□□ 2.85
TSPAN4-217ENST00000527644 POLR2AP24928 1970 aaKnown RBP32.83■■■□□ 2.85
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms