RNA–Protein interactions for RNA: ENST00000527467.5

CTNND1-216, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,071 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-216ENST00000527467 CCDC144CPQ8IYA2 1237 aa8.25□□□□□ -1.09
CTNND1-216ENST00000527467 PDCD7Q8N8D1 485 aaKnown RBP8.25□□□□□ -1.09
CTNND1-216ENST00000527467 CCDC94Q9BW85 323 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-216ENST00000527467 NACAP1Q9BZK3 213 aa8.25□□□□□ -1.09
CTNND1-216ENST00000527467 XAB2Q9HCS7 855 aaKnown RBP8.25□□□□□ -1.09
CTNND1-216ENST00000527467 H0YIN7 160 aa8.25□□□□□ -1.09
CTNND1-216ENST00000527467 CTAGE5O15320 804 aa8.25□□□□□ -1.09
CTNND1-216ENST00000527467 ATP6V1AP38606 617 aa8.25□□□□□ -1.09
CTNND1-216ENST00000527467 NOP2P46087 812 aaKnown RBP8.25□□□□□ -1.09
CTNND1-216ENST00000527467 TUBB4BP68371 445 aa8.25□□□□□ -1.09
CTNND1-216ENST00000527467 CETN1Q12798 172 aa8.25□□□□□ -1.09
CTNND1-216ENST00000527467 FERMT2Q96AC1 680 aa8.25□□□□□ -1.09
CTNND1-216ENST00000527467 SEC62Q99442 399 aaKnown RBP8.25□□□□□ -1.09
CTNND1-216ENST00000527467 TMX1Q9H3N1 280 aa8.25□□□□□ -1.09
CTNND1-216ENST00000527467 BCS1LQ9Y276 419 aa8.25□□□□□ -1.09
CTNND1-216ENST00000527467 PSDA5PKW4 1024 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-216ENST00000527467 DNAJC8O75937 253 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-216ENST00000527467 MRPS9P82933 396 aaKnown RBP8.25□□□□□ -1.09
CTNND1-216ENST00000527467 SLC27A3Q5K4L6 730 aa8.25□□□□□ -1.09
CTNND1-216ENST00000527467 CEP85LQ5SZL2 805 aa8.25□□□□□ -1.09
CTNND1-216ENST00000527467 SMAP1Q8IYB5 467 aaPredicted RBP8.25□□□□□ -1.09
CTNND1-216ENST00000527467 NYXQ9GZU5 481 aa8.25□□□□□ -1.09
CTNND1-216ENST00000527467 PREX1Q8TCU6 1659 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 SMIM24O75264 130 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 CABLES1Q8TDN4 633 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 ZSWIM4Q9H7M6 989 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 ABCC3O15438 1527 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 NAIPQ13075 1403 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 CFAP157Q5JU67 520 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 HDAC9Q9UKV0 1011 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 FAF1Q9UNN5 650 aaPredicted RBP8.24□□□□□ -1.09
CTNND1-216ENST00000527467 APAF1O14727 1248 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 MYO1BO43795 1136 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 ZEB2O60315 1214 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 GRM1Q13255 1194 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 CPLX3Q8WVH0 158 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 PREX2Q70Z35 1606 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 SH3BP5O60239 455 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 TUBB4AP04350 444 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 GNAI3P08754 354 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 ZNF76P36508 570 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 CAMK4Q16566 473 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 RPAINQ86UA6 219 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 LCA5Q86VQ0 697 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 NCAPGQ9BPX3 1015 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 DDX24Q9GZR7 859 aaKnown RBP eCLIP8.24□□□□□ -1.091e-7■■■□□ 16.3
CTNND1-216ENST00000527467 VPS18Q9P253 973 aa8.24□□□□□ -1.09
CTNND1-216ENST00000527467 DCCP43146 1447 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 CCDC14Q49A88 953 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 GSDMBQ8TAX9 411 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 ODF2LQ9ULJ1 636 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 ADGRL3Q9HAR2 1447 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 GCP02774 474 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 GNAI1P63096 354 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 BLOC1S2Q6QNY1 142 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 MTUS1Q9ULD2 1270 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 ATF5Q9Y2D1 282 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-216ENST00000527467 KCNQ2O43526 872 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 INPP5BP32019 993 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 NECTIN2Q92692 538 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 SCAND2PQ9GZW5 306 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-216ENST00000527467 SPATS2LQ9NUQ6 558 aaKnown RBP8.23□□□□□ -1.09
CTNND1-216ENST00000527467 USP25Q9UHP3 1055 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 ZBTB12Q9Y330 459 aaPredicted RBP8.23□□□□□ -1.09
CTNND1-216ENST00000527467 CETN3O15182 167 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 SURF6O75683 361 aaKnown RBP8.23□□□□□ -1.09
CTNND1-216ENST00000527467 TUBBP07437 444 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 COG7P83436 770 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 TMC6Q7Z403 805 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 RIC3Q7Z5B4 369 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 ARHGAP24Q8N264 748 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 FAM76AQ8TAV0 307 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 SELENOOQ9BVL4 669 aa8.23□□□□□ -1.09
CTNND1-216ENST00000527467 BRD2P25440 801 aaKnown RBP8.22□□□□□ -1.09
CTNND1-216ENST00000527467 ATP2B2Q01814 1243 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 EN1Q05925 392 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-216ENST00000527467 TRPC3Q13507 836 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 PPP4R3AQ6IN85 833 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 MICAL1Q8TDZ2 1067 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 CCDC40Q4G0X9 1142 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 CXorf38Q8TB03 319 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 GCC1Q96CN9 775 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 EYA3Q99504 573 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 PDRG1Q9NUG6 133 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 SATB2Q9UPW6 733 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 PARD3Q8TEW0 1356 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 INPP1P49441 399 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 OTUD7BQ6GQQ9 843 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 BICDL1Q6ZP65 573 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 EIF2AQ9BY44 585 aaKnown RBP8.22□□□□□ -1.09
CTNND1-216ENST00000527467 TTC12Q9H892 705 aaPredicted RBP8.22□□□□□ -1.09
CTNND1-216ENST00000527467 OGFRQ9NZT2 677 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 VGLL3A8MV65 326 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 PRPHP41219 470 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 TCIRG1Q13488 830 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 KRT32Q14532 448 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 KIF22Q14807 665 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 SETDB2Q96T68 719 aa8.22□□□□□ -1.09
CTNND1-216ENST00000527467 PHAXQ9H814 394 aaKnown RBP8.22□□□□□ -1.09
CTNND1-216ENST00000527467 A6NNZ2 444 aa8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms