RNA–Protein interactions for RNA: ENST00000527363.5

C11orf54-205, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 1,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-205ENST00000527363 PRKG1Q13976 671 aa13.86□□□□□ -0.19
C11orf54-205ENST00000527363 FAM109BQ6ICB4 259 aaPredicted RBP13.86□□□□□ -0.19
C11orf54-205ENST00000527363 PTPN18Q99952 460 aa13.86□□□□□ -0.19
C11orf54-205ENST00000527363 PANK3Q9H999 370 aa13.86□□□□□ -0.19
C11orf54-205ENST00000527363 PODXL2Q9NZ53 605 aa13.86□□□□□ -0.19
C11orf54-205ENST00000527363 SCAF8Q9UPN6 1271 aaKnown RBP13.86□□□□□ -0.19
C11orf54-205ENST00000527363 FARP2O94887 1054 aaPredicted RBP13.85□□□□□ -0.19
C11orf54-205ENST00000527363 GPSM2P81274 684 aa13.85□□□□□ -0.19
C11orf54-205ENST00000527363 MTFR1Q15390 333 aa13.85□□□□□ -0.19
C11orf54-205ENST00000527363 PODNQ7Z5L7 613 aa13.85□□□□□ -0.19
C11orf54-205ENST00000527363 USP17L3A6NCW0 530 aa13.84□□□□□ -0.19
C11orf54-205ENST00000527363 USP17L4A6NCW7 530 aa13.84□□□□□ -0.19
C11orf54-205ENST00000527363 HCLS1P14317 486 aaPredicted RBP13.84□□□□□ -0.19
C11orf54-205ENST00000527363 HSP90AB3PQ58FF7 597 aa13.84□□□□□ -0.19
C11orf54-205ENST00000527363 USP17L1Q7RTZ2 530 aa13.84□□□□□ -0.19
C11orf54-205ENST00000527363 TDHQ8IZJ6 230 aa13.84□□□□□ -0.19
C11orf54-205ENST00000527363 RTF1Q92541 710 aaKnown RBP13.84□□□□□ -0.19
C11orf54-205ENST00000527363 RRP7AQ9Y3A4 280 aaKnown RBP13.84□□□□□ -0.19
C11orf54-205ENST00000527363 COL1A1P02452 1464 aaPredicted RBP13.84□□□□□ -0.19
C11orf54-205ENST00000527363 BCAMP50895 628 aa13.83□□□□□ -0.2
C11orf54-205ENST00000527363 TAF1CQ15572 869 aaPredicted RBP13.83□□□□□ -0.2
C11orf54-205ENST00000527363 SH3TC1Q8TE82 1336 aa13.83□□□□□ -0.2
C11orf54-205ENST00000527363 LRRC37AA6NMS7 1700 aa13.82□□□□□ -0.2
C11orf54-205ENST00000527363 DDX60Q8IY21 1712 aaKnown RBP13.82□□□□□ -0.2
C11orf54-205ENST00000527363 HOXD10P28358 340 aa13.82□□□□□ -0.2
C11orf54-205ENST00000527363 UBXN2AP68543 259 aa13.82□□□□□ -0.2
C11orf54-205ENST00000527363 LACTBP83111 547 aaPredicted RBP13.82□□□□□ -0.2
C11orf54-205ENST00000527363 HELBQ8NG08 1087 aaPredicted RBP13.82□□□□□ -0.2
C11orf54-205ENST00000527363 U2AF1L4Q8WU68 220 aaKnown RBP13.82□□□□□ -0.2
C11orf54-205ENST00000527363 RNF208Q9H0X6 261 aa13.82□□□□□ -0.2
C11orf54-205ENST00000527363 PPP2R3BQ9Y5P8 575 aa13.82□□□□□ -0.2
C11orf54-205ENST00000527363 MYO3BQ8WXR4 1341 aa13.82□□□□□ -0.2
C11orf54-205ENST00000527363 MUC3AQ02505 3323 aa13.82□□□□□ -0.2
C11orf54-205ENST00000527363 NUP98P52948 1817 aa13.81□□□□□ -0.2
C11orf54-205ENST00000527363 CCL5P13501 91 aa13.81□□□□□ -0.2
C11orf54-205ENST00000527363 MYL6BP14649 208 aa13.81□□□□□ -0.2
C11orf54-205ENST00000527363 GRK4P32298 578 aa13.81□□□□□ -0.2
C11orf54-205ENST00000527363 SF3B3Q15393 1217 aaKnown RBP13.81□□□□□ -0.2
C11orf54-205ENST00000527363 CELF1Q92879 486 aaKnown RBP13.81□□□□□ -0.2
C11orf54-205ENST00000527363 CLMNQ96JQ2 1002 aa13.81□□□□□ -0.2
C11orf54-205ENST00000527363 TRMT112Q9UI30 125 aaKnown RBP13.81□□□□□ -0.2
C11orf54-205ENST00000527363 KNSTRNQ9Y448 316 aa13.81□□□□□ -0.2
C11orf54-205ENST00000527363 ZNF646O15015 1829 aaPredicted RBP13.8□□□□□ -0.2
C11orf54-205ENST00000527363 POTEB2H3BUK9 544 aa13.8□□□□□ -0.2
C11orf54-205ENST00000527363 HTATSF1O43719 755 aaKnown RBP13.8□□□□□ -0.2
C11orf54-205ENST00000527363 TLR2O60603 784 aa13.8□□□□□ -0.2
C11orf54-205ENST00000527363 SGPL1O95470 568 aa13.8□□□□□ -0.2
C11orf54-205ENST00000527363 IREB2P48200 963 aaKnown RBP13.8□□□□□ -0.2
C11orf54-205ENST00000527363 TAF7Q15545 349 aaPredicted RBP13.8□□□□□ -0.2
C11orf54-205ENST00000527363 SUPT20HL1Q3ZLR7 823 aa13.8□□□□□ -0.2
C11orf54-205ENST00000527363 NLRP10Q86W26 655 aa13.8□□□□□ -0.2
C11orf54-205ENST00000527363 ANKRD13AQ8IZ07 590 aa13.8□□□□□ -0.2
C11orf54-205ENST00000527363 TRIM47Q96LD4 638 aa13.8□□□□□ -0.2
C11orf54-205ENST00000527363 POLR3GLQ9BT43 218 aa13.8□□□□□ -0.2
C11orf54-205ENST00000527363 ZCCHC17Q9NP64 241 aaKnown RBP13.8□□□□□ -0.2
C11orf54-205ENST00000527363 GGA1Q9UJY5 639 aa13.8□□□□□ -0.2
C11orf54-205ENST00000527363 TNFRSF10AO00220 468 aa13.79□□□□□ -0.2
C11orf54-205ENST00000527363 PNISRQ8TF01 805 aaKnown RBP13.79□□□□□ -0.2
C11orf54-205ENST00000527363 MS4A4AQ96JQ5 239 aa13.79□□□□□ -0.2
C11orf54-205ENST00000527363 GUCD1Q96NT3 240 aa13.79□□□□□ -0.2
C11orf54-205ENST00000527363 DEFB129Q9H1M3 183 aa13.79□□□□□ -0.2
C11orf54-205ENST00000527363 SRRDQ9UH36 339 aa13.79□□□□□ -0.2
C11orf54-205ENST00000527363 ARIH1Q9Y4X5 557 aaPredicted RBP13.79□□□□□ -0.2
C11orf54-205ENST00000527363 ANKRD36CQ5JPF3 1778 aa13.78□□□□□ -0.2
C11orf54-205ENST00000527363 UFL1O94874 794 aa13.78□□□□□ -0.2
C11orf54-205ENST00000527363 GJA5P36382 358 aa13.78□□□□□ -0.2
C11orf54-205ENST00000527363 GTF2A2P52657 109 aa13.78□□□□□ -0.2
C11orf54-205ENST00000527363 RPS8P62241 208 aaKnown RBP13.78□□□□□ -0.2
C11orf54-205ENST00000527363 RAET1EQ8TD07 263 aa13.78□□□□□ -0.2
C11orf54-205ENST00000527363 RIPOR2Q9Y4F9 1068 aa13.78□□□□□ -0.2
C11orf54-205ENST00000527363 U2SURPO15042 1029 aaKnown RBP13.77□□□□□ -0.21
C11orf54-205ENST00000527363 LAMB1P07942 1786 aa13.77□□□□□ -0.21
C11orf54-205ENST00000527363 FAM205AQ6ZU69 1335 aa13.77□□□□□ -0.21
C11orf54-205ENST00000527363 ARHGAP39Q9C0H5 1083 aa13.77□□□□□ -0.21
C11orf54-205ENST00000527363 ANKIB1Q9P2G1 1089 aa13.77□□□□□ -0.21
C11orf54-205ENST00000527363 IRS2Q9Y4H2 1338 aa13.77□□□□□ -0.21
C11orf54-205ENST00000527363 SYNGAP1Q96PV0 1343 aa13.76□□□□□ -0.21
C11orf54-205ENST00000527363 MCM10Q7L590 875 aa13.76□□□□□ -0.21
C11orf54-205ENST00000527363 BRI3BPQ8WY22 251 aa13.76□□□□□ -0.21
C11orf54-205ENST00000527363 PHACTR3Q96KR7 559 aa13.76□□□□□ -0.21
C11orf54-205ENST00000527363 FZD1Q9UP38 647 aa13.76□□□□□ -0.21
C11orf54-205ENST00000527363 SCN9AQ15858 1988 aa13.75□□□□□ -0.21
C11orf54-205ENST00000527363 CCL15-CCL14A0A0B4J2E2 113 aa13.75□□□□□ -0.21
C11orf54-205ENST00000527363 SASH1O94885 1247 aa13.75□□□□□ -0.21
C11orf54-205ENST00000527363 CCL15Q16663 113 aa13.75□□□□□ -0.21
C11orf54-205ENST00000527363 DACT2Q5SW24 774 aa13.75□□□□□ -0.21
C11orf54-205ENST00000527363 STRIP1Q5VSL9 837 aa13.75□□□□□ -0.21
C11orf54-205ENST00000527363 OPTNQ96CV9 577 aa13.75□□□□□ -0.21
C11orf54-205ENST00000527363 ZBED3Q96IU2 234 aaPredicted RBP13.75□□□□□ -0.21
C11orf54-205ENST00000527363 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.75□□□□□ -0.21
C11orf54-205ENST00000527363 BIN2Q9UBW5 565 aaPredicted RBP13.75□□□□□ -0.21
C11orf54-205ENST00000527363 NECAB2Q7Z6G3 386 aa13.74□□□□□ -0.21
C11orf54-205ENST00000527363 SLAIN1Q8ND83 568 aa13.74□□□□□ -0.21
C11orf54-205ENST00000527363 MAFAQ8NHW3 353 aaPredicted RBP13.74□□□□□ -0.21
C11orf54-205ENST00000527363 UBE2OQ9C0C9 1292 aaKnown RBP13.74□□□□□ -0.21
C11orf54-205ENST00000527363 RAPGEFL1Q9UHV5 662 aa13.74□□□□□ -0.21
C11orf54-205ENST00000527363 USP2O75604 605 aaPredicted RBP13.73□□□□□ -0.21
C11orf54-205ENST00000527363 TFRCP02786 760 aaKnown RBP13.73□□□□□ -0.21
C11orf54-205ENST00000527363 MAGEA10P43363 369 aaPredicted RBP13.73□□□□□ -0.21
C11orf54-205ENST00000527363 EIF4A1P60842 406 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms