RNA–Protein interactions for RNA: ENST00000526869.1

SMCO4-203, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 1 (best)

Gene SMCO4, Length 374 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-203ENST00000526869 PARP3Q9Y6F1 533 aa24.77■■□□□ 1.56
SMCO4-203ENST00000526869 MMP10P09238 476 aa24.76■■□□□ 1.55
SMCO4-203ENST00000526869 PHKA1P46020 1223 aa24.76■■□□□ 1.55
SMCO4-203ENST00000526869 ANAPC15P60006 121 aa24.76■■□□□ 1.55
SMCO4-203ENST00000526869 CRAMP1Q96RY5 1269 aa24.76■■□□□ 1.55
SMCO4-203ENST00000526869 LSG1Q9H089 658 aaKnown RBP24.76■■□□□ 1.55
SMCO4-203ENST00000526869 ZBTB22O15209 634 aa24.75■■□□□ 1.55
SMCO4-203ENST00000526869 ZFYP08048 801 aaPredicted RBP24.75■■□□□ 1.55
SMCO4-203ENST00000526869 SCARF1Q14162 830 aa24.75■■□□□ 1.55
SMCO4-203ENST00000526869 TTF1Q15361 905 aaPredicted RBP24.75■■□□□ 1.55
SMCO4-203ENST00000526869 NDUFB9Q9Y6M9 179 aa24.75■■□□□ 1.55
SMCO4-203ENST00000526869 ZNF804BA4D1E1 1349 aa24.75■■□□□ 1.55
SMCO4-203ENST00000526869 MCAMP43121 646 aa24.74■■□□□ 1.55
SMCO4-203ENST00000526869 RABEP1Q15276 862 aa24.74■■□□□ 1.55
SMCO4-203ENST00000526869 TMC4Q7Z404 712 aa24.74■■□□□ 1.55
SMCO4-203ENST00000526869 IL27Q8NEV9 243 aa24.74■■□□□ 1.55
SMCO4-203ENST00000526869 FAM227BQ96M60 508 aa24.74■■□□□ 1.55
SMCO4-203ENST00000526869 A0A0D9SFI3 127 aa24.73■■□□□ 1.55
SMCO4-203ENST00000526869 ZAP70P43403 619 aa24.73■■□□□ 1.55
SMCO4-203ENST00000526869 FKBP4Q02790 459 aaKnown RBP eCLIP24.73■■□□□ 1.55
SMCO4-203ENST00000526869 DEFB132Q7Z7B7 95 aa24.73■■□□□ 1.55
SMCO4-203ENST00000526869 HELLSQ9NRZ9 838 aa24.73■■□□□ 1.55
SMCO4-203ENST00000526869 LRRC37AA6NMS7 1700 aa24.72■■□□□ 1.55
SMCO4-203ENST00000526869 CCDC171Q6TFL3 1326 aa24.72■■□□□ 1.55
SMCO4-203ENST00000526869 RNF113AO15541 343 aaKnown RBP24.72■■□□□ 1.55
SMCO4-203ENST00000526869 BBOX1O75936 387 aa24.72■■□□□ 1.55
SMCO4-203ENST00000526869 SNX21Q969T3 373 aa24.72■■□□□ 1.55
SMCO4-203ENST00000526869 DAXXQ9UER7 740 aaPredicted RBP24.72■■□□□ 1.55
SMCO4-203ENST00000526869 MYH7P12883 1935 aa24.71■■□□□ 1.55
SMCO4-203ENST00000526869 SNAP23O00161 211 aa24.71■■□□□ 1.55
SMCO4-203ENST00000526869 HSPA4P34932 840 aa24.71■■□□□ 1.55
SMCO4-203ENST00000526869 PDE6BP35913 854 aa24.71■■□□□ 1.55
SMCO4-203ENST00000526869 ZMYM1Q5SVZ6 1142 aa24.71■■□□□ 1.55
SMCO4-203ENST00000526869 GNL3LQ9NVN8 582 aaKnown RBP24.71■■□□□ 1.55
SMCO4-203ENST00000526869 KCNJ4P48050 445 aa24.7■■□□□ 1.54
SMCO4-203ENST00000526869 MCMDC2Q4G0Z9 681 aa24.7■■□□□ 1.54
SMCO4-203ENST00000526869 ZSCAN25Q6NSZ9 544 aa24.7■■□□□ 1.54
SMCO4-203ENST00000526869 SPATA5Q8NB90 893 aa24.7■■□□□ 1.54
SMCO4-203ENST00000526869 DDX24Q9GZR7 859 aaKnown RBP eCLIP24.7■■□□□ 1.54
SMCO4-203ENST00000526869 ANTXR1Q9H6X2 564 aa24.7■■□□□ 1.54
SMCO4-203ENST00000526869 HMG20BQ9P0W2 317 aa24.7■■□□□ 1.54
SMCO4-203ENST00000526869 LEMD3Q9Y2U8 911 aa24.7■■□□□ 1.54
SMCO4-203ENST00000526869 DOCK2Q92608 1830 aa24.7■■□□□ 1.54
SMCO4-203ENST00000526869 XDHP47989 1333 aa24.69■■□□□ 1.54
SMCO4-203ENST00000526869 SEMA3EO15041 775 aa24.69■■□□□ 1.54
SMCO4-203ENST00000526869 RASGRF1Q13972 1273 aa24.69■■□□□ 1.54
SMCO4-203ENST00000526869 CAVIN4Q5BKX8 364 aa24.69■■□□□ 1.54
SMCO4-203ENST00000526869 PDS5AQ29RF7 1337 aaKnown RBP24.68■■□□□ 1.54
SMCO4-203ENST00000526869 CYP2E1P05181 493 aaPredicted RBP24.68■■□□□ 1.54
SMCO4-203ENST00000526869 NPR1P16066 1061 aa24.68■■□□□ 1.54
SMCO4-203ENST00000526869 BCAMP50895 628 aa24.68■■□□□ 1.54
SMCO4-203ENST00000526869 FBXO33Q7Z6M2 555 aa24.68■■□□□ 1.54
SMCO4-203ENST00000526869 SLC16A10Q8TF71 515 aa24.68■■□□□ 1.54
SMCO4-203ENST00000526869 COL11A2P13942 1736 aaPredicted RBP24.67■■□□□ 1.54
SMCO4-203ENST00000526869 MSL1Q68DK7 614 aa24.67■■□□□ 1.54
SMCO4-203ENST00000526869 PI16Q6UXB8 463 aa24.67■■□□□ 1.54
SMCO4-203ENST00000526869 C15orf52Q6ZUT6 534 aaKnown RBP24.67■■□□□ 1.54
SMCO4-203ENST00000526869 MAP4K1Q92918 833 aa24.67■■□□□ 1.54
SMCO4-203ENST00000526869 KCNB2Q92953 911 aa24.67■■□□□ 1.54
SMCO4-203ENST00000526869 IRS2Q9Y4H2 1338 aa24.66■■□□□ 1.54
SMCO4-203ENST00000526869 SRGNP10124 158 aa24.66■■□□□ 1.54
SMCO4-203ENST00000526869 TBC1D2Q9BYX2 928 aa24.66■■□□□ 1.54
SMCO4-203ENST00000526869 PTH1RQ03431 593 aa24.65■■□□□ 1.54
SMCO4-203ENST00000526869 ZNF589Q86UQ0 364 aaPredicted RBP24.65■■□□□ 1.54
SMCO4-203ENST00000526869 HSCBQ8IWL3 235 aa24.65■■□□□ 1.54
SMCO4-203ENST00000526869 FAM84BQ96KN1 310 aaPredicted RBP24.65■■□□□ 1.54
SMCO4-203ENST00000526869 PIH1D3Q9NQM4 214 aaKnown RBP24.65■■□□□ 1.54
SMCO4-203ENST00000526869 PODXL2Q9NZ53 605 aa24.65■■□□□ 1.54
SMCO4-203ENST00000526869 UBE3CQ15386 1083 aa24.64■■□□□ 1.54
SMCO4-203ENST00000526869 APPBP2Q92624 585 aa24.64■■□□□ 1.54
SMCO4-203ENST00000526869 DENND2AQ9ULE3 1009 aa24.64■■□□□ 1.54
SMCO4-203ENST00000526869 PALD1Q9ULE6 856 aa24.64■■□□□ 1.54
SMCO4-203ENST00000526869 LTBP1Q14766 1721 aa24.64■■□□□ 1.53
SMCO4-203ENST00000526869 ATP2B4P23634 1241 aa24.63■■□□□ 1.53
SMCO4-203ENST00000526869 ALDH1B1P30837 517 aa24.63■■□□□ 1.53
SMCO4-203ENST00000526869 ADD2P35612 726 aa24.63■■□□□ 1.53
SMCO4-203ENST00000526869 GYG1P46976 350 aa24.63■■□□□ 1.53
SMCO4-203ENST00000526869 NECTIN1Q15223 517 aa24.63■■□□□ 1.53
SMCO4-203ENST00000526869 VPS37DQ86XT2 251 aa24.63■■□□□ 1.53
SMCO4-203ENST00000526869 SP8Q8IXZ3 490 aa24.63■■□□□ 1.53
SMCO4-203ENST00000526869 MASTLQ96GX5 879 aa24.63■■□□□ 1.53
SMCO4-203ENST00000526869 ANKIB1Q9P2G1 1089 aa24.63■■□□□ 1.53
SMCO4-203ENST00000526869 RBM8AQ9Y5S9 174 aaKnown RBP24.63■■□□□ 1.53
SMCO4-203ENST00000526869 MAST3O60307 1309 aa24.62■■□□□ 1.53
SMCO4-203ENST00000526869 PPEF1O14829 653 aaPredicted RBP24.62■■□□□ 1.53
SMCO4-203ENST00000526869 HIBADHP31937 336 aaKnown RBP24.62■■□□□ 1.53
SMCO4-203ENST00000526869 U3KPZ7 1027 aaPredicted RBP24.62■■□□□ 1.53
SMCO4-203ENST00000526869 IGSF3O75054 1194 aa24.61■■□□□ 1.53
SMCO4-203ENST00000526869 MAP3K12Q12852 859 aa24.61■■□□□ 1.53
SMCO4-203ENST00000526869 SEC62Q99442 399 aaKnown RBP24.61■■□□□ 1.53
SMCO4-203ENST00000526869 DSCC1Q9BVC3 393 aa24.61■■□□□ 1.53
SMCO4-203ENST00000526869 SNX14Q9Y5W7 946 aa24.61■■□□□ 1.53
SMCO4-203ENST00000526869 COL1A1P02452 1464 aaPredicted RBP24.6■■□□□ 1.53
SMCO4-203ENST00000526869 ST18O60284 1047 aa24.6■■□□□ 1.53
SMCO4-203ENST00000526869 GPSM2P81274 684 aa24.6■■□□□ 1.53
SMCO4-203ENST00000526869 RNF20Q5VTR2 975 aa24.6■■□□□ 1.53
SMCO4-203ENST00000526869 STYK1Q6J9G0 422 aa24.6■■□□□ 1.53
SMCO4-203ENST00000526869 ATP6V0A2Q9Y487 856 aa24.6■■□□□ 1.53
SMCO4-203ENST00000526869 MYH13Q9UKX3 1938 aa24.59■■□□□ 1.53
SMCO4-203ENST00000526869 WTIPA6NIX2 430 aaPredicted RBP24.59■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms