RNA–Protein interactions for RNA: ENST00000526696.6

SSRP1-203, Transcript of structure specific recognition protein 1, humanhuman

TSL 3

Gene SSRP1, Length 948 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1-203ENST00000526696 PTPN18Q99952 460 aa17.88■□□□□ 0.45
SSRP1-203ENST00000526696 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.88■□□□□ 0.45
SSRP1-203ENST00000526696 USP17L3A6NCW0 530 aa17.87■□□□□ 0.45
SSRP1-203ENST00000526696 USP17L4A6NCW7 530 aa17.87■□□□□ 0.45
SSRP1-203ENST00000526696 SASH1O94885 1247 aa17.87■□□□□ 0.45
SSRP1-203ENST00000526696 GJA5P36382 358 aa17.87■□□□□ 0.45
SSRP1-203ENST00000526696 SLC9C1Q4G0N8 1177 aa17.87■□□□□ 0.45
SSRP1-203ENST00000526696 USP17L1Q7RTZ2 530 aa17.87■□□□□ 0.45
SSRP1-203ENST00000526696 SEC31BQ9NQW1 1179 aa17.87■□□□□ 0.45
SSRP1-203ENST00000526696 GGA1Q9UJY5 639 aa17.87■□□□□ 0.45
SSRP1-203ENST00000526696 SSC5DA1L4H1 1573 aa17.87■□□□□ 0.45
SSRP1-203ENST00000526696 ZSWIM8A7E2V4 1837 aa17.86■□□□□ 0.45
SSRP1-203ENST00000526696 ZBTB48P10074 688 aaPredicted RBP17.86■□□□□ 0.45
SSRP1-203ENST00000526696 SHISA4Q96DD7 197 aa17.86■□□□□ 0.45
SSRP1-203ENST00000526696 SLC10A4Q96EP9 437 aa17.86■□□□□ 0.45
SSRP1-203ENST00000526696 NUDCQ9Y266 331 aa17.86■□□□□ 0.45
SSRP1-203ENST00000526696 MAP3K11Q16584 847 aa17.85■□□□□ 0.45
SSRP1-203ENST00000526696 LRCH3Q96II8 777 aa17.85■□□□□ 0.45
SSRP1-203ENST00000526696 CFAP53Q96M91 514 aa17.85■□□□□ 0.45
SSRP1-203ENST00000526696 ANKIB1Q9P2G1 1089 aa17.85■□□□□ 0.45
SSRP1-203ENST00000526696 RTL5Q5HYW3 569 aaPredicted RBP17.84■□□□□ 0.45
SSRP1-203ENST00000526696 DACT2Q5SW24 774 aa17.84■□□□□ 0.45
SSRP1-203ENST00000526696 NBPF11Q86T75 865 aa17.84■□□□□ 0.45
SSRP1-203ENST00000526696 SH3TC2Q8TF17 1288 aa17.84■□□□□ 0.45
SSRP1-203ENST00000526696 DPF3Q92784 378 aa17.84■□□□□ 0.45
SSRP1-203ENST00000526696 ISCA1Q9BUE6 129 aa17.84■□□□□ 0.45
SSRP1-203ENST00000526696 VCANP13611 3396 aa17.84■□□□□ 0.45
SSRP1-203ENST00000526696 PODNQ7Z5L7 613 aa17.83■□□□□ 0.44
SSRP1-203ENST00000526696 TESPA1A2RU30 521 aaPredicted RBP17.82■□□□□ 0.44
SSRP1-203ENST00000526696 ZBED3Q96IU2 234 aaPredicted RBP17.82■□□□□ 0.44
SSRP1-203ENST00000526696 ATP5J2-PTCD1G3V325 749 aa17.81■□□□□ 0.44
SSRP1-203ENST00000526696 UBE2Q1Q7Z7E8 422 aa17.81■□□□□ 0.44
SSRP1-203ENST00000526696 APOBEC3FQ8IUX4 373 aaKnown RBP17.81■□□□□ 0.44
SSRP1-203ENST00000526696 IRS4O14654 1257 aaPredicted RBP17.8■□□□□ 0.44
SSRP1-203ENST00000526696 COL25A1Q9BXS0 654 aaPredicted RBP17.8■□□□□ 0.44
SSRP1-203ENST00000526696 MTFR1Q15390 333 aa17.79■□□□□ 0.44
SSRP1-203ENST00000526696 OTUD7BQ6GQQ9 843 aa17.79■□□□□ 0.44
SSRP1-203ENST00000526696 OGFOD1Q8N543 542 aa17.79■□□□□ 0.44
SSRP1-203ENST00000526696 ARHGAP39Q9C0H5 1083 aa17.79■□□□□ 0.44
SSRP1-203ENST00000526696 DEFB129Q9H1M3 183 aa17.79■□□□□ 0.44
SSRP1-203ENST00000526696 TSPYL4Q9UJ04 414 aa17.79■□□□□ 0.44
SSRP1-203ENST00000526696 OTOFQ9HC10 1997 aa17.79■□□□□ 0.44
SSRP1-203ENST00000526696 XDHP47989 1333 aa17.77■□□□□ 0.44
SSRP1-203ENST00000526696 COL1A1P02452 1464 aaPredicted RBP17.77■□□□□ 0.44
SSRP1-203ENST00000526696 ZBTB7BO15156 539 aaPredicted RBP17.77■□□□□ 0.44
SSRP1-203ENST00000526696 MS4A4AQ96JQ5 239 aa17.77■□□□□ 0.44
SSRP1-203ENST00000526696 PLEKHF1Q96S99 279 aa17.77■□□□□ 0.44
SSRP1-203ENST00000526696 ATP2B4P23634 1241 aa17.76■□□□□ 0.43
SSRP1-203ENST00000526696 PPP2R1AP30153 589 aa17.76■□□□□ 0.43
SSRP1-203ENST00000526696 NFE2L2Q16236 605 aa17.76■□□□□ 0.43
SSRP1-203ENST00000526696 STRIP1Q5VSL9 837 aa17.76■□□□□ 0.43
SSRP1-203ENST00000526696 PLBD2Q8NHP8 589 aa17.76■□□□□ 0.43
SSRP1-203ENST00000526696 MYO3BQ8WXR4 1341 aa17.75■□□□□ 0.43
SSRP1-203ENST00000526696 SPTBN5Q9NRC6 3674 aaKnown RBP17.75■□□□□ 0.43
SSRP1-203ENST00000526696 A0A1W2PPC1 479 aa17.75■□□□□ 0.43
SSRP1-203ENST00000526696 USP2O75604 605 aaPredicted RBP17.75■□□□□ 0.43
SSRP1-203ENST00000526696 KRT24Q2M2I5 525 aa17.75■□□□□ 0.43
SSRP1-203ENST00000526696 KIAA0825Q8IV33 1275 aa17.75■□□□□ 0.43
SSRP1-203ENST00000526696 BRI3BPQ8WY22 251 aa17.75■□□□□ 0.43
SSRP1-203ENST00000526696 FBXW7Q969H0 707 aa17.75■□□□□ 0.43
SSRP1-203ENST00000526696 PCDHAC2Q9Y5I4 1007 aa17.75■□□□□ 0.43
SSRP1-203ENST00000526696 MED23Q9ULK4 1368 aa17.75■□□□□ 0.43
SSRP1-203ENST00000526696 ECM29Q5VYK3 1845 aa17.75■□□□□ 0.43
SSRP1-203ENST00000526696 UNCXA6NJT0 531 aa17.74■□□□□ 0.43
SSRP1-203ENST00000526696 PPP1R12BO60237 982 aaPredicted RBP17.74■□□□□ 0.43
SSRP1-203ENST00000526696 NBPF12Q5TAG4 269 aaPredicted RBP17.74■□□□□ 0.43
SSRP1-203ENST00000526696 TXNRD3Q86VQ6 643 aa17.74■□□□□ 0.43
SSRP1-203ENST00000526696 CCDC85AQ96PX6 553 aaPredicted RBP17.74■□□□□ 0.43
SSRP1-203ENST00000526696 CHPF2Q9P2E5 772 aa17.74■□□□□ 0.43
SSRP1-203ENST00000526696 TTC28Q96AY4 2481 aa17.74■□□□□ 0.43
SSRP1-203ENST00000526696 TAF1CQ15572 869 aaPredicted RBP17.73■□□□□ 0.43
SSRP1-203ENST00000526696 ANKRD13DQ6ZTN6 518 aa17.73■□□□□ 0.43
SSRP1-203ENST00000526696 Q7L0L9 218 aa17.73■□□□□ 0.43
SSRP1-203ENST00000526696 CNKSR2Q8WXI2 1034 aa17.73■□□□□ 0.43
SSRP1-203ENST00000526696 AOX1Q06278 1338 aa17.72■□□□□ 0.43
SSRP1-203ENST00000526696 TRIM28Q13263 835 aaKnown RBP17.72■□□□□ 0.43
SSRP1-203ENST00000526696 ARHGEF6Q15052 776 aa17.72■□□□□ 0.43
SSRP1-203ENST00000526696 FAM43AQ8N2R8 423 aa17.72■□□□□ 0.43
SSRP1-203ENST00000526696 OPTNQ96CV9 577 aa17.72■□□□□ 0.43
SSRP1-203ENST00000526696 ZFYVE28Q9HCC9 887 aa17.72■□□□□ 0.43
SSRP1-203ENST00000526696 ALPK3Q96L96 1907 aa17.71■□□□□ 0.43
SSRP1-203ENST00000526696 SPEF2Q9C093 1822 aa17.71■□□□□ 0.43
SSRP1-203ENST00000526696 HTATIP2Q9BUP3 242 aa17.71■□□□□ 0.43
SSRP1-203ENST00000526696 ELP3Q9H9T3 547 aa17.71■□□□□ 0.43
SSRP1-203ENST00000526696 STAP2Q9UGK3 403 aa17.71■□□□□ 0.43
SSRP1-203ENST00000526696 NR2E3Q9Y5X4 410 aa17.71■□□□□ 0.43
SSRP1-203ENST00000526696 CTGFP29279 349 aa17.7■□□□□ 0.42
SSRP1-203ENST00000526696 GJA8P48165 433 aa17.7■□□□□ 0.42
SSRP1-203ENST00000526696 MMP14P50281 582 aa17.7■□□□□ 0.42
SSRP1-203ENST00000526696 LACTBP83111 547 aaPredicted RBP17.7■□□□□ 0.42
SSRP1-203ENST00000526696 TTLL5Q6EMB2 1281 aa17.7■□□□□ 0.42
SSRP1-203ENST00000526696 ANKRD13AQ8IZ07 590 aa17.7■□□□□ 0.42
SSRP1-203ENST00000526696 DEFB123Q8N688 67 aa17.7■□□□□ 0.42
SSRP1-203ENST00000526696 ZBTB38Q8NAP3 1195 aaPredicted RBP17.7■□□□□ 0.42
SSRP1-203ENST00000526696 JARID2Q92833 1246 aaPredicted RBP17.7■□□□□ 0.42
SSRP1-203ENST00000526696 COA1Q9GZY4 146 aa17.7■□□□□ 0.42
SSRP1-203ENST00000526696 STXBP5LQ9Y2K9 1186 aa17.7■□□□□ 0.42
SSRP1-203ENST00000526696 ZNF804BA4D1E1 1349 aa17.7■□□□□ 0.42
SSRP1-203ENST00000526696 KLRK1P26718 216 aa17.69■□□□□ 0.42
SSRP1-203ENST00000526696 IREB2P48200 963 aaKnown RBP17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms