RNA–Protein interactions for RNA: ENST00000526457.3

LRRK1-205, Transcript of leucine rich repeat kinase 1, humanhuman

TSL 1 (best)

Gene LRRK1, Length 11,632 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK1-205ENST00000526457 ANKRD30BQ9BXX2 1392 aa8.71□□□□□ -1.02
LRRK1-205ENST00000526457 TCERG1LQ5VWI1 586 aa8.71□□□□□ -1.02
LRRK1-205ENST00000526457 E7EVH7 732 aa8.71□□□□□ -1.02
LRRK1-205ENST00000526457 CABS1Q96KC9 395 aa8.71□□□□□ -1.02
LRRK1-205ENST00000526457 NUTM1Q86Y26 1132 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 GAS2L2Q8NHY3 880 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 TRIM47Q96LD4 638 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 CCDC196A0A1B0GTZ2 297 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 TSR2Q969E8 191 aaKnown RBP8.7□□□□□ -1.02
LRRK1-205ENST00000526457 JPH4Q96JJ6 628 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 TACC3Q9Y6A5 838 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 RALGAPBQ86X10 1494 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 CCDC102BQ68D86 513 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 NEK11Q8NG66 645 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 SEC63Q9UGP8 760 aaKnown RBP8.7□□□□□ -1.02
LRRK1-205ENST00000526457 AKAP2Q9Y2D5 859 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 SYKP43405 635 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 KRT83P78385 493 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 SRGAP3O43295 1099 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 NLRP5P59047 1200 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 GOLGA5Q8TBA6 731 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 N4BP2L2Q92802 583 aaPredicted RBP8.7□□□□□ -1.02
LRRK1-205ENST00000526457 PPP1R9AQ9ULJ8 1098 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 PALMDQ9NP74 551 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 GJB2P29033 226 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 Q9H521 79 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 CNPY2Q9Y2B0 182 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 IRX4P78413 519 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 VIRMAQ69YN4 1812 aaKnown RBP8.7□□□□□ -1.02
LRRK1-205ENST00000526457 ZSCAN25Q6NSZ9 544 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 RAB34Q9BZG1 259 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 TSGA10Q9BZW7 698 aa8.7□□□□□ -1.02
LRRK1-205ENST00000526457 GOLGA8BA8MQT2 603 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 PPFIA1Q13136 1202 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 TMEM266Q2M3C6 531 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 LMBR1Q8WVP7 490 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 NDC80O14777 642 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 HSP90AA4PQ58FG1 418 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 TBC1D32Q96NH3 1257 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 NSD2O96028 1365 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 FKBP4Q02790 459 aaKnown RBP eCLIP8.69□□□□□ -1.02
LRRK1-205ENST00000526457 TWISTNBQ3B726 338 aaPredicted RBP8.69□□□□□ -1.02
LRRK1-205ENST00000526457 SYTL4Q96C24 671 aaPredicted RBP8.69□□□□□ -1.02
LRRK1-205ENST00000526457 STRN4Q9NRL3 753 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 IRAK4Q9NWZ3 460 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 RPGRIP1LQ68CZ1 1315 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 DUSP27Q5VZP5 1158 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 CREB3O43889 395 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 MRPS9P82933 396 aaKnown RBP8.69□□□□□ -1.02
LRRK1-205ENST00000526457 PPP1R7Q15435 360 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 CCDC122Q5T0U0 273 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 DNAJC25Q9H1X3 360 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 TMEM110-MUSTN1A8MSY1 372 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 CLTAP09496 248 aa8.69□□□□□ -1.02
LRRK1-205ENST00000526457 PYM1Q9BRP8 204 aaKnown RBP8.69□□□□□ -1.02
LRRK1-205ENST00000526457 RASSF2P50749 326 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 HSP90AA5PQ58FG0 334 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 FAN1Q9Y2M0 1017 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 TROQ12816 1431 aaPredicted RBP8.68□□□□□ -1.02
LRRK1-205ENST00000526457 RRP15Q9Y3B9 282 aaKnown RBP8.68□□□□□ -1.02
LRRK1-205ENST00000526457 WDHD1O75717 1129 aaPredicted RBP8.68□□□□□ -1.02
LRRK1-205ENST00000526457 SLMAPQ14BN4 828 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 USP48Q86UV5 1035 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 JRKLQ9Y4A0 524 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 PPM1FP49593 454 aaPredicted RBP8.68□□□□□ -1.02
LRRK1-205ENST00000526457 E2F4Q16254 413 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 UTP14CQ5TAP6 766 aaKnown RBP8.68□□□□□ -1.02
LRRK1-205ENST00000526457 MAP3K21Q5TCX8 1036 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 DDX54Q8TDD1 881 aaKnown RBP8.68□□□□□ -1.02
LRRK1-205ENST00000526457 PFDN4Q9NQP4 134 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 MINK1Q8N4C8 1332 aaPredicted RBP8.68□□□□□ -1.02
LRRK1-205ENST00000526457 CLUL1Q15846 466 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 CNNM1Q9NRU3 951 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 EXOC1Q9NV70 894 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 SNAPC4Q5SXM2 1469 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 SH3BP5O60239 455 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 LMOD1P29536 600 aaPredicted RBP8.68□□□□□ -1.02
LRRK1-205ENST00000526457 RPSAP08865 295 aaKnown RBP8.68□□□□□ -1.02
LRRK1-205ENST00000526457 RPRD2Q5VT52 1461 aaKnown RBP8.68□□□□□ -1.02
LRRK1-205ENST00000526457 A0A087WZG4 1122 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 USP5P45974 858 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 RUFY4Q6ZNE9 571 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 DDX21Q9NR30 783 aaKnown RBP eCLIP8.68□□□□□ -1.02
LRRK1-205ENST00000526457 TXNDC16Q9P2K2 825 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 NUB1Q9Y5A7 615 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 TUBB2AQ13885 445 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 TUBB2BQ9BVA1 445 aa8.68□□□□□ -1.02
LRRK1-205ENST00000526457 EPRSP07814 1512 aaKnown RBP8.67□□□□□ -1.02
LRRK1-205ENST00000526457 NAPGQ99747 312 aaPredicted RBP8.67□□□□□ -1.02
LRRK1-205ENST00000526457 MRPL46Q9H2W6 279 aaKnown RBP8.67□□□□□ -1.02
LRRK1-205ENST00000526457 RMND1Q9NWS8 449 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 I3L4J1 428 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 SPAG1Q07617 926 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 YY1AP1Q9H869 796 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 ZFXP17010 805 aaPredicted RBP8.67□□□□□ -1.02
LRRK1-205ENST00000526457 PCYT1AP49585 367 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 ALDH1L2Q3SY69 923 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 SKAP1Q86WV1 359 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 ATP2A3Q93084 1043 aa8.67□□□□□ -1.02
LRRK1-205ENST00000526457 BICD1Q96G01 975 aa8.67□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms