RNA–Protein interactions for RNA: ENST00000526299.5

ECHDC1-219, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 534 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-219ENST00000526299 KLHL23Q8NBE8 558 aa6.5□□□□□ -1.37
ECHDC1-219ENST00000526299 KLHDC7BQ96G42 594 aa6.5□□□□□ -1.37
ECHDC1-219ENST00000526299 PRMT3O60678 531 aa6.49□□□□□ -1.37
ECHDC1-219ENST00000526299 CYP2E1P05181 493 aaPredicted RBP6.49□□□□□ -1.37
ECHDC1-219ENST00000526299 BMP3P12645 472 aa6.49□□□□□ -1.37
ECHDC1-219ENST00000526299 LCE1DQ5T752 114 aa6.49□□□□□ -1.37
ECHDC1-219ENST00000526299 FAM117BQ6P1L5 589 aa6.49□□□□□ -1.37
ECHDC1-219ENST00000526299 COL26A1Q96A83 441 aa6.49□□□□□ -1.37
ECHDC1-219ENST00000526299 FAM83CQ9BQN1 747 aa6.49□□□□□ -1.37
ECHDC1-219ENST00000526299 KCNF1Q9H3M0 494 aa6.49□□□□□ -1.37
ECHDC1-219ENST00000526299 ADGRE2Q9UHX3 823 aa6.49□□□□□ -1.37
ECHDC1-219ENST00000526299 TNFRSF10BO14763 440 aa6.48□□□□□ -1.37
ECHDC1-219ENST00000526299 SART1O43290 800 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-219ENST00000526299 HOXA10P31260 410 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-219ENST00000526299 PREPP48147 710 aa6.48□□□□□ -1.37
ECHDC1-219ENST00000526299 FZD5Q13467 585 aa6.48□□□□□ -1.37
ECHDC1-219ENST00000526299 CFAP70Q5T0N1 1121 aa6.48□□□□□ -1.37
ECHDC1-219ENST00000526299 TTC39BQ5VTQ0 682 aaPredicted RBP6.48□□□□□ -1.37
ECHDC1-219ENST00000526299 C16orf46Q6P387 395 aa6.48□□□□□ -1.37
ECHDC1-219ENST00000526299 CAPN12Q6ZSI9 719 aa6.48□□□□□ -1.37
ECHDC1-219ENST00000526299 BEND4Q6ZU67 534 aa6.48□□□□□ -1.37
ECHDC1-219ENST00000526299 PIK3R5Q8WYR1 880 aa6.48□□□□□ -1.37
ECHDC1-219ENST00000526299 PBX4Q9BYU1 374 aa6.48□□□□□ -1.37
ECHDC1-219ENST00000526299 NOVA2Q9UNW9 492 aaKnown RBP6.48□□□□□ -1.37
ECHDC1-219ENST00000526299 WDR64B1ANS9 1081 aa6.47□□□□□ -1.37
ECHDC1-219ENST00000526299 KIF4AO95239 1232 aa6.47□□□□□ -1.37
ECHDC1-219ENST00000526299 RFX1P22670 979 aa6.47□□□□□ -1.37
ECHDC1-219ENST00000526299 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.47□□□□□ -1.37
ECHDC1-219ENST00000526299 POP1Q99575 1024 aaKnown RBP6.47□□□□□ -1.37
ECHDC1-219ENST00000526299 KRTAP4-7Q9BYR0 210 aa6.47□□□□□ -1.37
ECHDC1-219ENST00000526299 SEC31BQ9NQW1 1179 aa6.47□□□□□ -1.37
ECHDC1-219ENST00000526299 PTPRAP18433 802 aa6.46□□□□□ -1.38
ECHDC1-219ENST00000526299 ZAP70P43403 619 aa6.46□□□□□ -1.38
ECHDC1-219ENST00000526299 OCLNQ16625 522 aa6.46□□□□□ -1.38
ECHDC1-219ENST00000526299 NCAPG2Q86XI2 1143 aa6.46□□□□□ -1.38
ECHDC1-219ENST00000526299 CEP120Q8N960 986 aa6.46□□□□□ -1.38
ECHDC1-219ENST00000526299 GPR152Q8TDT2 470 aa6.46□□□□□ -1.38
ECHDC1-219ENST00000526299 MKNK1Q9BUB5 465 aa6.46□□□□□ -1.38
ECHDC1-219ENST00000526299 NLRP12P59046 1061 aa6.45□□□□□ -1.38
ECHDC1-219ENST00000526299 NAA30Q147X3 362 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-219ENST00000526299 ANKRD34AQ69YU3 496 aa6.45□□□□□ -1.38
ECHDC1-219ENST00000526299 ABI1Q8IZP0 508 aa6.45□□□□□ -1.38
ECHDC1-219ENST00000526299 MFSD14AQ96MC6 490 aa6.45□□□□□ -1.38
ECHDC1-219ENST00000526299 ADAM19Q9H013 955 aa6.45□□□□□ -1.38
ECHDC1-219ENST00000526299 ZMYND15Q9H091 742 aa6.45□□□□□ -1.38
ECHDC1-219ENST00000526299 ABI2Q9NYB9 513 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-219ENST00000526299 FAM13BQ9NYF5 915 aa6.45□□□□□ -1.38
ECHDC1-219ENST00000526299 FNDC3AQ9Y2H6 1198 aaKnown RBP6.45□□□□□ -1.38
ECHDC1-219ENST00000526299 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP6.45□□□□□ -1.38
ECHDC1-219ENST00000526299 H3BRJ5 948 aa6.44□□□□□ -1.38
ECHDC1-219ENST00000526299 ZBTB39O15060 712 aa6.44□□□□□ -1.38
ECHDC1-219ENST00000526299 SWI5Q1ZZU3 235 aa6.44□□□□□ -1.38
ECHDC1-219ENST00000526299 RNF208Q9H0X6 261 aa6.44□□□□□ -1.38
ECHDC1-219ENST00000526299 KANSL3Q9P2N6 904 aa6.44□□□□□ -1.38
ECHDC1-219ENST00000526299 ACIN1Q9UKV3 1341 aaKnown RBP6.44□□□□□ -1.38
ECHDC1-219ENST00000526299 ACPPP15309 386 aa6.43□□□□□ -1.38
ECHDC1-219ENST00000526299 RUSC1Q9BVN2 902 aa6.43□□□□□ -1.38
ECHDC1-219ENST00000526299 PIM2Q9P1W9 311 aa6.43□□□□□ -1.38
ECHDC1-219ENST00000526299 ZMIZ1Q9ULJ6 1067 aa6.43□□□□□ -1.38
ECHDC1-219ENST00000526299 HIF3AQ9Y2N7 669 aa6.43□□□□□ -1.38
ECHDC1-219ENST00000526299 FAM177BA6PVY3 158 aa6.42□□□□□ -1.38
ECHDC1-219ENST00000526299 MAP4P27816 1152 aaKnown RBP6.42□□□□□ -1.38
ECHDC1-219ENST00000526299 PIP4K2BP78356 416 aa6.42□□□□□ -1.38
ECHDC1-219ENST00000526299 FAM69CQ0P6D2 419 aa6.42□□□□□ -1.38
ECHDC1-219ENST00000526299 SGO2Q562F6 1265 aa6.42□□□□□ -1.38
ECHDC1-219ENST00000526299 HGSNATQ68CP4 663 aa6.42□□□□□ -1.38
ECHDC1-219ENST00000526299 FDX2Q6P4F2 183 aa6.42□□□□□ -1.38
ECHDC1-219ENST00000526299 FBXL6Q8N531 539 aa6.42□□□□□ -1.38
ECHDC1-219ENST00000526299 SLC7A3Q8WY07 619 aa6.42□□□□□ -1.38
ECHDC1-219ENST00000526299 OSGEPQ9NPF4 335 aa6.42□□□□□ -1.38
ECHDC1-219ENST00000526299 TMEM63CQ9P1W3 806 aa6.42□□□□□ -1.38
ECHDC1-219ENST00000526299 CNTN3Q9P232 1028 aa6.42□□□□□ -1.38
ECHDC1-219ENST00000526299 GAS2O43903 313 aaKnown RBP6.41□□□□□ -1.38
ECHDC1-219ENST00000526299 TRPA1O75762 1119 aa6.41□□□□□ -1.38
ECHDC1-219ENST00000526299 F13BP05160 661 aa6.41□□□□□ -1.38
ECHDC1-219ENST00000526299 CABP4P57796 275 aa6.41□□□□□ -1.38
ECHDC1-219ENST00000526299 SHISA5Q8N114 240 aa6.41□□□□□ -1.38
ECHDC1-219ENST00000526299 WNT8BQ93098 351 aa6.41□□□□□ -1.38
ECHDC1-219ENST00000526299 ELP3Q9H9T3 547 aa6.41□□□□□ -1.38
ECHDC1-219ENST00000526299 LEMD3Q9Y2U8 911 aa6.41□□□□□ -1.38
ECHDC1-219ENST00000526299 NFKBIEO00221 500 aa6.4□□□□□ -1.38
ECHDC1-219ENST00000526299 OGFOD2Q6N063 350 aa6.4□□□□□ -1.38
ECHDC1-219ENST00000526299 STK32AQ8WU08 396 aa6.4□□□□□ -1.38
ECHDC1-219ENST00000526299 HHIPQ96QV1 700 aa6.4□□□□□ -1.38
ECHDC1-219ENST00000526299 ATG3Q9NT62 314 aa6.4□□□□□ -1.38
ECHDC1-219ENST00000526299 CXXC1Q9P0U4 656 aaPredicted RBP6.4□□□□□ -1.38
ECHDC1-219ENST00000526299 STIM2Q9P246 746 aa6.4□□□□□ -1.38
ECHDC1-219ENST00000526299 ANGEL1Q9UNK9 670 aaKnown RBP6.4□□□□□ -1.38
ECHDC1-219ENST00000526299 RXRBP28702 533 aa6.39□□□□□ -1.39
ECHDC1-219ENST00000526299 JAG1P78504 1218 aa6.39□□□□□ -1.39
ECHDC1-219ENST00000526299 MSMPQ1L6U9 139 aa6.39□□□□□ -1.39
ECHDC1-219ENST00000526299 NFXL1Q6ZNB6 911 aa6.39□□□□□ -1.39
ECHDC1-219ENST00000526299 NUDT16Q96DE0 195 aaKnown RBP6.39□□□□□ -1.39
ECHDC1-219ENST00000526299 CCDC39Q9UFE4 941 aa6.39□□□□□ -1.39
ECHDC1-219ENST00000526299 SALL4Q9UJQ4 1053 aa6.39□□□□□ -1.39
ECHDC1-219ENST00000526299 MEGF11A6BM72 1044 aa6.38□□□□□ -1.39
ECHDC1-219ENST00000526299 FOSL1P15407 271 aa6.38□□□□□ -1.39
ECHDC1-219ENST00000526299 PDE12Q6L8Q7 609 aaKnown RBP6.38□□□□□ -1.39
ECHDC1-219ENST00000526299 ZNF438Q7Z4V0 828 aa6.38□□□□□ -1.39
ECHDC1-219ENST00000526299 GIMAP7Q8NHV1 300 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms