RNA–Protein interactions for RNA: ENST00000526009.5

CLNS1A-205, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 3

Gene CLNS1A, Length 747 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-205ENST00000526009 RDH13Q8NBN7 331 aa10□□□□□ -0.81
CLNS1A-205ENST00000526009 TLL2Q9Y6L7 1015 aa10□□□□□ -0.81
CLNS1A-205ENST00000526009 TRAF5O00463 557 aa9.99□□□□□ -0.81
CLNS1A-205ENST00000526009 U2SURPO15042 1029 aaKnown RBP9.99□□□□□ -0.81
CLNS1A-205ENST00000526009 AOC2O75106 756 aa9.99□□□□□ -0.81
CLNS1A-205ENST00000526009 SNRPA1P09661 255 aaKnown RBP9.99□□□□□ -0.81
CLNS1A-205ENST00000526009 BRPF1P55201 1214 aaPredicted RBP9.99□□□□□ -0.81
CLNS1A-205ENST00000526009 PPP4CP60510 307 aa9.99□□□□□ -0.81
CLNS1A-205ENST00000526009 GRIPAP1Q4V328 841 aa9.99□□□□□ -0.81
CLNS1A-205ENST00000526009 SULF1Q8IWU6 871 aa9.99□□□□□ -0.81
CLNS1A-205ENST00000526009 MCOLN1Q9GZU1 580 aa9.99□□□□□ -0.81
CLNS1A-205ENST00000526009 HPS5Q9UPZ3 1129 aa9.99□□□□□ -0.81
CLNS1A-205ENST00000526009 PRAMEF22A3QJZ6 481 aa9.98□□□□□ -0.81
CLNS1A-205ENST00000526009 SSTR3P32745 418 aaPredicted RBP9.98□□□□□ -0.81
CLNS1A-205ENST00000526009 THSD4Q6ZMP0 1018 aa9.98□□□□□ -0.81
CLNS1A-205ENST00000526009 SAPCD2Q86UD0 394 aa9.98□□□□□ -0.81
CLNS1A-205ENST00000526009 LARGE2Q8N3Y3 721 aa9.98□□□□□ -0.81
CLNS1A-205ENST00000526009 CEMIPQ8WUJ3 1361 aa9.98□□□□□ -0.81
CLNS1A-205ENST00000526009 DGKZQ13574 1117 aa9.97□□□□□ -0.81
CLNS1A-205ENST00000526009 HLFQ16534 295 aa9.97□□□□□ -0.81
CLNS1A-205ENST00000526009 CRY2Q49AN0 593 aa9.97□□□□□ -0.81
CLNS1A-205ENST00000526009 CC2D1BQ5T0F9 858 aaKnown RBP9.97□□□□□ -0.81
CLNS1A-205ENST00000526009 TMUB1Q9BVT8 246 aa9.97□□□□□ -0.81
CLNS1A-205ENST00000526009 NYXQ9GZU5 481 aa9.97□□□□□ -0.81
CLNS1A-205ENST00000526009 FAM217BQ9NTX9 383 aaPredicted RBP9.97□□□□□ -0.81
CLNS1A-205ENST00000526009 THSD7BQ9C0I4 1608 aa9.96□□□□□ -0.81
CLNS1A-205ENST00000526009 BCORQ6W2J9 1755 aa9.96□□□□□ -0.81
CLNS1A-205ENST00000526009 CELF2O95319 508 aaKnown RBP9.96□□□□□ -0.82
CLNS1A-205ENST00000526009 NBPF10Q6P3W6 841 aaKnown RBP9.96□□□□□ -0.82
CLNS1A-205ENST00000526009 NUTM1Q86Y26 1132 aa9.96□□□□□ -0.82
CLNS1A-205ENST00000526009 NIM1KQ8IY84 436 aa9.96□□□□□ -0.82
CLNS1A-205ENST00000526009 NBPF15Q8N660 670 aa9.96□□□□□ -0.82
CLNS1A-205ENST00000526009 RPGRQ92834 1020 aaKnown RBP9.96□□□□□ -0.82
CLNS1A-205ENST00000526009 HHIPL1Q96JK4 782 aa9.96□□□□□ -0.82
CLNS1A-205ENST00000526009 KDM4CQ9H3R0 1056 aa9.96□□□□□ -0.82
CLNS1A-205ENST00000526009 ADARB2Q9NS39 739 aaKnown RBP9.96□□□□□ -0.82
CLNS1A-205ENST00000526009 GPRC5DQ9NZD1 345 aa9.96□□□□□ -0.82
CLNS1A-205ENST00000526009 TSR3Q9UJK0 312 aaKnown RBP9.96□□□□□ -0.82
CLNS1A-205ENST00000526009 SNED1Q8TER0 1413 aa9.96□□□□□ -0.82
CLNS1A-205ENST00000526009 HOXA10P31260 410 aaPredicted RBP9.95□□□□□ -0.82
CLNS1A-205ENST00000526009 RTF1Q92541 710 aaKnown RBP9.95□□□□□ -0.82
CLNS1A-205ENST00000526009 PHACTR3Q96KR7 559 aa9.95□□□□□ -0.82
CLNS1A-205ENST00000526009 TMX4Q9H1E5 349 aaPredicted RBP9.95□□□□□ -0.82
CLNS1A-205ENST00000526009 LTBP1Q14766 1721 aa9.95□□□□□ -0.82
CLNS1A-205ENST00000526009 SIPA1L3O60292 1781 aaPredicted RBP9.94□□□□□ -0.82
CLNS1A-205ENST00000526009 COL4A5P29400 1685 aa9.94□□□□□ -0.82
CLNS1A-205ENST00000526009 TCERG1O14776 1098 aaKnown RBP9.94□□□□□ -0.82
CLNS1A-205ENST00000526009 PER1O15534 1290 aaPredicted RBP9.94□□□□□ -0.82
CLNS1A-205ENST00000526009 PPIP5K2O43314 1243 aa9.94□□□□□ -0.82
CLNS1A-205ENST00000526009 SLC10A3P09131 477 aa9.94□□□□□ -0.82
CLNS1A-205ENST00000526009 PRKAR2BP31323 418 aa9.94□□□□□ -0.82
CLNS1A-205ENST00000526009 CIAPIN1Q6FI81 312 aa9.94□□□□□ -0.82
CLNS1A-205ENST00000526009 RBM17Q96I25 401 aaKnown RBP9.94□□□□□ -0.82
CLNS1A-205ENST00000526009 CRAMP1Q96RY5 1269 aa9.94□□□□□ -0.82
CLNS1A-205ENST00000526009 GLIS2Q9BZE0 524 aaPredicted RBP9.94□□□□□ -0.82
CLNS1A-205ENST00000526009 VPS33BQ9H267 617 aa9.94□□□□□ -0.82
CLNS1A-205ENST00000526009 PGAP2Q9UHJ9 254 aa9.94□□□□□ -0.82
CLNS1A-205ENST00000526009 CASP8AP2Q9UKL3 1982 aa9.94□□□□□ -0.82
CLNS1A-205ENST00000526009 ABCC12Q96J65 1359 aa9.93□□□□□ -0.82
CLNS1A-205ENST00000526009 KIF7Q2M1P5 1343 aa9.93□□□□□ -0.82
CLNS1A-205ENST00000526009 CLSPNQ9HAW4 1339 aa9.93□□□□□ -0.82
CLNS1A-205ENST00000526009 ERVV-1B6SEH8 477 aa9.93□□□□□ -0.82
CLNS1A-205ENST00000526009 PPEF1O14829 653 aaPredicted RBP9.93□□□□□ -0.82
CLNS1A-205ENST00000526009 MS4A1P11836 297 aa9.93□□□□□ -0.82
CLNS1A-205ENST00000526009 CXCL9Q07325 125 aa9.93□□□□□ -0.82
CLNS1A-205ENST00000526009 NOGQ13253 232 aa9.93□□□□□ -0.82
CLNS1A-205ENST00000526009 CDC37L1Q7L3B6 337 aa9.93□□□□□ -0.82
CLNS1A-205ENST00000526009 NGEFQ8N5V2 710 aa9.93□□□□□ -0.82
CLNS1A-205ENST00000526009 NECTIN2Q92692 538 aa9.93□□□□□ -0.82
CLNS1A-205ENST00000526009 ZNF408Q9H9D4 720 aa9.93□□□□□ -0.82
CLNS1A-205ENST00000526009 TRPM7Q96QT4 1865 aa9.93□□□□□ -0.82
CLNS1A-205ENST00000526009 NPC1L1Q9UHC9 1359 aa9.92□□□□□ -0.82
CLNS1A-205ENST00000526009 TRIM26Q12899 539 aaPredicted RBP9.92□□□□□ -0.82
CLNS1A-205ENST00000526009 AOC3Q16853 763 aa9.92□□□□□ -0.82
CLNS1A-205ENST00000526009 MCM10Q7L590 875 aa9.92□□□□□ -0.82
CLNS1A-205ENST00000526009 RSPH6AQ9H0K4 717 aa9.92□□□□□ -0.82
CLNS1A-205ENST00000526009 ZNRF3Q9ULT6 936 aa9.92□□□□□ -0.82
CLNS1A-205ENST00000526009 PDE4DIPQ5VU43 2346 aa9.91□□□□□ -0.82
CLNS1A-205ENST00000526009 COL3A1P02461 1466 aaPredicted RBP9.91□□□□□ -0.82
CLNS1A-205ENST00000526009 MAP3K15Q6ZN16 1313 aa9.91□□□□□ -0.82
CLNS1A-205ENST00000526009 CFHP08603 1231 aa9.91□□□□□ -0.82
CLNS1A-205ENST00000526009 CD46P15529 392 aa9.91□□□□□ -0.82
CLNS1A-205ENST00000526009 GPTP24298 496 aa9.91□□□□□ -0.82
CLNS1A-205ENST00000526009 GMPSP49915 693 aaPredicted RBP9.91□□□□□ -0.82
CLNS1A-205ENST00000526009 CNGB1Q14028 1251 aaPredicted RBP9.91□□□□□ -0.82
CLNS1A-205ENST00000526009 SUSD4Q5VX71 490 aa9.91□□□□□ -0.82
CLNS1A-205ENST00000526009 KIF6Q6ZMV9 814 aa9.91□□□□□ -0.82
CLNS1A-205ENST00000526009 SUPT20HQ8NEM7 779 aa9.91□□□□□ -0.82
CLNS1A-205ENST00000526009 ZIC5Q96T25 663 aa9.91□□□□□ -0.82
CLNS1A-205ENST00000526009 BCL2L13Q9BXK5 485 aa9.91□□□□□ -0.82
CLNS1A-205ENST00000526009 ATP6V0A2Q9Y487 856 aa9.91□□□□□ -0.82
CLNS1A-205ENST00000526009 HTATSF1O43719 755 aaKnown RBP9.9□□□□□ -0.82
CLNS1A-205ENST00000526009 HIRAP54198 1017 aaPredicted RBP9.9□□□□□ -0.82
CLNS1A-205ENST00000526009 HUNKP57058 714 aa9.9□□□□□ -0.82
CLNS1A-205ENST00000526009 DCTN1Q14203 1278 aa9.9□□□□□ -0.82
CLNS1A-205ENST00000526009 TNIP1Q15025 636 aa9.9□□□□□ -0.82
CLNS1A-205ENST00000526009 TAF7Q15545 349 aaPredicted RBP9.9□□□□□ -0.82
CLNS1A-205ENST00000526009 TTLL7Q6ZT98 887 aa9.9□□□□□ -0.82
CLNS1A-205ENST00000526009 SLC51AQ86UW1 340 aa9.9□□□□□ -0.82
CLNS1A-205ENST00000526009 NLRP3Q96P20 1036 aa9.9□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms