RNA–Protein interactions for RNA: ENST00000525257.1

USP47-205, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 4

Gene USP47, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-205ENST00000525257 PAPPA2Q9BXP8 1791 aa30.78■■■□□ 2.52
USP47-205ENST00000525257 CSRNP1Q96S65 589 aa30.77■■■□□ 2.52
USP47-205ENST00000525257 PITPNM2Q9BZ72 1349 aa30.76■■■□□ 2.52
USP47-205ENST00000525257 RASAL3Q86YV0 1011 aa30.76■■■□□ 2.51
USP47-205ENST00000525257 FBXW7Q969H0 707 aa30.76■■■□□ 2.51
USP47-205ENST00000525257 ZNF646O15015 1829 aaPredicted RBP30.75■■■□□ 2.51
USP47-205ENST00000525257 NEURL1BA8MQ27 555 aa30.75■■■□□ 2.51
USP47-205ENST00000525257 CCT4P50991 539 aaKnown RBP30.75■■■□□ 2.51
USP47-205ENST00000525257 G2E3Q7L622 706 aa30.75■■■□□ 2.51
USP47-205ENST00000525257 MXD3Q9BW11 206 aa30.75■■■□□ 2.51
USP47-205ENST00000525257 UBE3BQ7Z3V4 1068 aa30.74■■■□□ 2.51
USP47-205ENST00000525257 FKBP1BP68106 108 aa30.73■■■□□ 2.51
USP47-205ENST00000525257 NBPF9Q3BBW0 867 aa30.73■■■□□ 2.51
USP47-205ENST00000525257 DACT2Q5SW24 774 aa30.73■■■□□ 2.51
USP47-205ENST00000525257 MOB2Q70IA6 237 aa30.73■■■□□ 2.51
USP47-205ENST00000525257 TWISTNBQ3B726 338 aaPredicted RBP30.72■■■□□ 2.51
USP47-205ENST00000525257 PRAMEF18Q5VWM3 479 aa30.71■■■□□ 2.51
USP47-205ENST00000525257 H7C1W4 665 aa30.7■■■□□ 2.51
USP47-205ENST00000525257 SLC4A2P04920 1241 aa30.7■■■□□ 2.51
USP47-205ENST00000525257 IGHMBP2P38935 993 aaKnown RBP30.7■■■□□ 2.51
USP47-205ENST00000525257 CCDC184Q52MB2 194 aa30.7■■■□□ 2.51
USP47-205ENST00000525257 TXNRD3Q86VQ6 643 aa30.7■■■□□ 2.51
USP47-205ENST00000525257 OGFOD1Q8N543 542 aa30.69■■■□□ 2.5
USP47-205ENST00000525257 COA1Q9GZY4 146 aa30.69■■■□□ 2.5
USP47-205ENST00000525257 UBE2Q2LH0YL09 131 aa30.68■■■□□ 2.5
USP47-205ENST00000525257 STRIP1Q5VSL9 837 aa30.68■■■□□ 2.5
USP47-205ENST00000525257 WWC1Q8IX03 1113 aa30.68■■■□□ 2.5
USP47-205ENST00000525257 REM2Q8IYK8 340 aaPredicted RBP30.68■■■□□ 2.5
USP47-205ENST00000525257 MYO3BQ8WXR4 1341 aa30.68■■■□□ 2.5
USP47-205ENST00000525257 CCDC27Q2M243 656 aa30.67■■■□□ 2.5
USP47-205ENST00000525257 LEMD3Q9Y2U8 911 aa30.67■■■□□ 2.5
USP47-205ENST00000525257 TNRC18O15417 2968 aaPredicted RBP30.67■■■□□ 2.5
USP47-205ENST00000525257 WNT10BO00744 389 aa30.66■■■□□ 2.5
USP47-205ENST00000525257 ITGA6P23229 1130 aa30.66■■■□□ 2.5
USP47-205ENST00000525257 KLRK1P26718 216 aa30.66■■■□□ 2.5
USP47-205ENST00000525257 TTLL12Q14166 644 aaPredicted RBP30.66■■■□□ 2.5
USP47-205ENST00000525257 GCKRQ14397 625 aa30.66■■■□□ 2.5
USP47-205ENST00000525257 ZNF804BA4D1E1 1349 aa30.66■■■□□ 2.5
USP47-205ENST00000525257 SASH1O94885 1247 aa30.65■■■□□ 2.5
USP47-205ENST00000525257 FLIIQ13045 1269 aa30.64■■■□□ 2.5
USP47-205ENST00000525257 MPHOSPH8Q99549 860 aa30.64■■■□□ 2.5
USP47-205ENST00000525257 PLA2G12BQ9BX93 195 aa30.64■■■□□ 2.5
USP47-205ENST00000525257 ANKRD2Q9GZV1 360 aa30.64■■■□□ 2.5
USP47-205ENST00000525257 CTU1Q7Z7A3 348 aaKnown RBP30.63■■■□□ 2.49
USP47-205ENST00000525257 CASP7P55210 303 aa30.62■■■□□ 2.49
USP47-205ENST00000525257 SOX10P56693 466 aa30.62■■■□□ 2.49
USP47-205ENST00000525257 FKBP5Q13451 457 aaPredicted RBP30.62■■■□□ 2.49
USP47-205ENST00000525257 TTLL5Q6EMB2 1281 aa30.62■■■□□ 2.49
USP47-205ENST00000525257 MYH16Q9H6N6 1097 aa30.62■■■□□ 2.49
USP47-205ENST00000525257 SLC34A2O95436 690 aa30.61■■■□□ 2.49
USP47-205ENST00000525257 NF2P35240 595 aa30.61■■■□□ 2.49
USP47-205ENST00000525257 KIAA0825Q8IV33 1275 aa30.61■■■□□ 2.49
USP47-205ENST00000525257 DNAAF4Q8WXU2 420 aa30.61■■■□□ 2.49
USP47-205ENST00000525257 IL16Q14005 1332 aa30.61■■■□□ 2.49
USP47-205ENST00000525257 KCNJ4P48050 445 aa30.6■■■□□ 2.49
USP47-205ENST00000525257 GTF2IP78347 998 aa30.6■■■□□ 2.49
USP47-205ENST00000525257 CSF1RP07333 972 aa30.59■■■□□ 2.49
USP47-205ENST00000525257 CHRNDQ07001 517 aa30.59■■■□□ 2.49
USP47-205ENST00000525257 MKRN3Q13064 507 aaKnown RBP30.59■■■□□ 2.49
USP47-205ENST00000525257 HDAC9Q9UKV0 1011 aa30.59■■■□□ 2.49
USP47-205ENST00000525257 FANCIQ9NVI1 1328 aa30.58■■■□□ 2.49
USP47-205ENST00000525257 TBC1D8O95759 1140 aa30.58■■■□□ 2.49
USP47-205ENST00000525257 LINS1Q8NG48 757 aa30.58■■■□□ 2.49
USP47-205ENST00000525257 MMP14P50281 582 aa30.57■■■□□ 2.48
USP47-205ENST00000525257 PRKG1Q13976 671 aa30.57■■■□□ 2.48
USP47-205ENST00000525257 APOBEC3FQ8IUX4 373 aaKnown RBP30.57■■■□□ 2.48
USP47-205ENST00000525257 CACNA1FO60840 1977 aa30.56■■■□□ 2.48
USP47-205ENST00000525257 ANKRD18BA2A2Z9 1011 aa30.55■■■□□ 2.48
USP47-205ENST00000525257 SNAP23O00161 211 aa30.55■■■□□ 2.48
USP47-205ENST00000525257 A0A1B0GUL6 1792 aa30.55■■■□□ 2.48
USP47-205ENST00000525257 PTPN12Q05209 780 aaKnown RBP30.54■■■□□ 2.48
USP47-205ENST00000525257 ZNF296Q8WUU4 475 aaPredicted RBP30.54■■■□□ 2.48
USP47-205ENST00000525257 ZBED3Q96IU2 234 aaPredicted RBP30.54■■■□□ 2.48
USP47-205ENST00000525257 CD209Q9NNX6 404 aa30.54■■■□□ 2.48
USP47-205ENST00000525257 PDE4DIPQ5VU43 2346 aa30.53■■■□□ 2.48
USP47-205ENST00000525257 TAF5LO75529 589 aa30.53■■■□□ 2.48
USP47-205ENST00000525257 TM4SF4P48230 202 aa30.53■■■□□ 2.48
USP47-205ENST00000525257 ARMC9Q7Z3E5 817 aa30.53■■■□□ 2.48
USP47-205ENST00000525257 HELBQ8NG08 1087 aaPredicted RBP30.53■■■□□ 2.48
USP47-205ENST00000525257 HPS5Q9UPZ3 1129 aa30.52■■■□□ 2.48
USP47-205ENST00000525257 CHMP3Q9Y3E7 222 aa30.52■■■□□ 2.48
USP47-205ENST00000525257 SALL2Q9Y467 1007 aaPredicted RBP30.52■■■□□ 2.48
USP47-205ENST00000525257 IRS2Q9Y4H2 1338 aa30.51■■■□□ 2.48
USP47-205ENST00000525257 VAMP4O75379 141 aa30.51■■■□□ 2.47
USP47-205ENST00000525257 CERS5Q8N5B7 392 aa30.51■■■□□ 2.47
USP47-205ENST00000525257 FZD1Q9UP38 647 aa30.51■■■□□ 2.47
USP47-205ENST00000525257 SREBF2Q12772 1141 aa30.5■■■□□ 2.47
USP47-205ENST00000525257 IFIT5Q13325 482 aaKnown RBP30.5■■■□□ 2.47
USP47-205ENST00000525257 DLGAP5Q15398 846 aa30.5■■■□□ 2.47
USP47-205ENST00000525257 ANGEL1Q9UNK9 670 aaKnown RBP30.5■■■□□ 2.47
USP47-205ENST00000525257 F6X3S4 739 aa30.49■■■□□ 2.47
USP47-205ENST00000525257 FOXO4P98177 505 aa30.49■■■□□ 2.47
USP47-205ENST00000525257 EXOSC9Q06265 439 aaKnown RBP30.49■■■□□ 2.47
USP47-205ENST00000525257 NCBP3Q53F19 620 aaKnown RBP30.49■■■□□ 2.47
USP47-205ENST00000525257 COL1A1P02452 1464 aaPredicted RBP30.49■■■□□ 2.47
USP47-205ENST00000525257 ECM29Q5VYK3 1845 aa30.48■■■□□ 2.47
USP47-205ENST00000525257 GPR25O00155 361 aa30.48■■■□□ 2.47
USP47-205ENST00000525257 DEFB129Q9H1M3 183 aa30.48■■■□□ 2.47
USP47-205ENST00000525257 MRS2Q9HD23 443 aa30.48■■■□□ 2.47
USP47-205ENST00000525257 PCDHAC2Q9Y5I4 1007 aa30.48■■■□□ 2.47
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms