RNA–Protein interactions for RNA: ENST00000525209.5

CD44-213, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 574 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-213ENST00000525209 WASLO00401 505 aaPredicted RBP5.61□□□□□ -1.51
CD44-213ENST00000525209 TCERG1O14776 1098 aaKnown RBP5.61□□□□□ -1.51
CD44-213ENST00000525209 RASGRP1O95267 797 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 F12P00748 615 aaPredicted RBP5.61□□□□□ -1.51
CD44-213ENST00000525209 MYL3P08590 195 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 JUNDP17535 347 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 SOX9P48436 509 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 RAB27AP51159 221 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 CNGB1Q14028 1251 aaPredicted RBP5.61□□□□□ -1.51
CD44-213ENST00000525209 C2orf27AQ580R0 203 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 MEI1Q5TIA1 1274 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 GET4Q7L5D6 327 aaPredicted RBP5.61□□□□□ -1.51
CD44-213ENST00000525209 SPICE1Q8N0Z3 855 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 GJD3Q8N144 294 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 SYNPOQ8N3V7 929 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 CHAC2Q8WUX2 184 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 AAASQ9NRG9 546 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 STIM2Q9P246 746 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 TAGLN3Q9UI15 199 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 FRMD4BQ9Y2L6 1034 aa5.61□□□□□ -1.51
CD44-213ENST00000525209 TTC24A2A3L6 582 aaPredicted RBP5.6□□□□□ -1.51
CD44-213ENST00000525209 STAT3P40763 770 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 CASP2P42575 452 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 SKOR1P84550 965 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 RASGRF1Q13972 1273 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 AXDND1Q5T1B0 1012 aaPredicted RBP5.6□□□□□ -1.51
CD44-213ENST00000525209 PTCRAQ6ISU1 281 aaPredicted RBP5.6□□□□□ -1.51
CD44-213ENST00000525209 CCDC70Q6NSX1 233 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 ERAP2Q6P179 960 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 PDXDC2PQ6P474 469 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 HDGFL2Q7Z4V5 671 aaPredicted RBP5.6□□□□□ -1.51
CD44-213ENST00000525209 THNSL2Q86YJ6 484 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 CREBRFQ8IUR6 639 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 KIAA0825Q8IV33 1275 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 JMYQ8N9B5 988 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 MRGPRX2Q96LB1 330 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 RBSNQ9H1K0 784 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 IFT122Q9HBG6 1241 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 GINM1Q9NU53 330 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 ZIM2Q9NZV7 527 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 MCM8Q9UJA3 840 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 KAT6BQ8WYB5 2073 aa5.6□□□□□ -1.51
CD44-213ENST00000525209 J3QL48 77 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 WNT7AO00755 349 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 GIPC1O14908 333 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 PDPK1O15530 556 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 AKAP10O43572 662 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 FAM193AP78312 1265 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 TM4SF20Q53R12 229 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 ALFQ53S48 1182 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 FAM83BQ5T0W9 1011 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 SLC4A10Q6U841 1118 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 SMAP1Q8IYB5 467 aaPredicted RBP5.59□□□□□ -1.51
CD44-213ENST00000525209 CELF2-AS1Q8N7Q2 184 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 CCDC89Q8N998 374 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 THAP3Q8WTV1 239 aaPredicted RBP5.59□□□□□ -1.51
CD44-213ENST00000525209 ZNF775Q96BV0 537 aaPredicted RBP5.59□□□□□ -1.51
CD44-213ENST00000525209 NUDT12Q9BQG2 462 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 MUC3BQ9H195 1237 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 KBTBD4Q9NVX7 518 aa5.59□□□□□ -1.51
CD44-213ENST00000525209 BICDL2A1A5D9 508 aa5.58□□□□□ -1.52
CD44-213ENST00000525209 EIF1AYO14602 144 aaKnown RBP5.58□□□□□ -1.52
CD44-213ENST00000525209 OPLAHO14841 1288 aa5.58□□□□□ -1.52
CD44-213ENST00000525209 SLC26A4O43511 780 aa5.58□□□□□ -1.52
CD44-213ENST00000525209 RNASEH2AO75792 299 aaKnown RBP5.58□□□□□ -1.52
CD44-213ENST00000525209 ASMTLO95671 621 aa5.58□□□□□ -1.52
CD44-213ENST00000525209 SMPD1P17405 629 aa5.58□□□□□ -1.52
CD44-213ENST00000525209 VARSP26640 1264 aaKnown RBP5.58□□□□□ -1.52
CD44-213ENST00000525209 RBM10P98175 930 aaKnown RBP5.58□□□□□ -1.52
CD44-213ENST00000525209 NFKB2Q00653 900 aa5.58□□□□□ -1.52
CD44-213ENST00000525209 COL9A2Q14055 689 aaPredicted RBP5.58□□□□□ -1.52
CD44-213ENST00000525209 RC3H1Q5TC82 1133 aaKnown RBP5.58□□□□□ -1.52
CD44-213ENST00000525209 NGDNQ8NEJ9 315 aaKnown RBP5.58□□□□□ -1.52
CD44-213ENST00000525209 SNRNP27Q8WVK2 155 aaKnown RBP5.58□□□□□ -1.52
CD44-213ENST00000525209 GPKOWQ92917 476 aaPredicted RBP eCLIP5.58□□□□□ -1.52
CD44-213ENST00000525209 CAAP1Q9H8G2 361 aa5.58□□□□□ -1.52
CD44-213ENST00000525209 ADAMTS1Q9UHI8 967 aa5.58□□□□□ -1.52
CD44-213ENST00000525209 POLIQ9UNA4 740 aa5.58□□□□□ -1.52
CD44-213ENST00000525209 CD2APQ9Y5K6 639 aa5.58□□□□□ -1.52
CD44-213ENST00000525209 PRRT4C9JH25 899 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 TCEA3O75764 348 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 F2P00734 622 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 IFIT2P09913 472 aaKnown RBP5.57□□□□□ -1.52
CD44-213ENST00000525209 NEK2P51955 445 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 USP4Q13107 963 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 ORC1Q13415 861 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 DDR2Q16832 855 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 COX20Q5RI15 118 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 NXNQ6DKJ4 435 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 PODNQ7Z5L7 613 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 DGKHQ86XP1 1220 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 TCEAL8Q8IYN2 117 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 ABTB2Q8N961 1025 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 SERBP1Q8NC51 408 aaKnown RBP eCLIP5.57□□□□□ -1.52
CD44-213ENST00000525209 ADAM32Q8TC27 787 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 CPLX3Q8WVH0 158 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 SCG3Q8WXD2 468 aaKnown RBP5.57□□□□□ -1.52
CD44-213ENST00000525209 ANAPC16Q96DE5 110 aa5.57□□□□□ -1.52
CD44-213ENST00000525209 EAF1Q96JC9 268 aaPredicted RBP5.57□□□□□ -1.52
CD44-213ENST00000525209 ASPSCR1Q9BZE9 553 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms