RNA–Protein interactions for RNA: ENST00000525079.5

TRAPPC4-205, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 768 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-205ENST00000525079 A0A1B0GUL6 1792 aa16.15■□□□□ 0.18
TRAPPC4-205ENST00000525079 USP17L3A6NCW0 530 aa16.15■□□□□ 0.18
TRAPPC4-205ENST00000525079 USP17L4A6NCW7 530 aa16.15■□□□□ 0.18
TRAPPC4-205ENST00000525079 RABL6Q3YEC7 729 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC4-205ENST00000525079 RSBN1LQ6PCB5 846 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC4-205ENST00000525079 USP17L1Q7RTZ2 530 aa16.15■□□□□ 0.18
TRAPPC4-205ENST00000525079 FRAT1Q92837 279 aaPredicted RBP16.15■□□□□ 0.18
TRAPPC4-205ENST00000525079 COA1Q9GZY4 146 aa16.15■□□□□ 0.18
TRAPPC4-205ENST00000525079 CREBZFQ9NS37 354 aa16.15■□□□□ 0.18
TRAPPC4-205ENST00000525079 MKRN1Q9UHC7 482 aaKnown RBP16.15■□□□□ 0.18
TRAPPC4-205ENST00000525079 TNNQ9UQP3 1299 aa16.15■□□□□ 0.18
TRAPPC4-205ENST00000525079 TMEM88BA6NKF7 163 aa16.14■□□□□ 0.17
TRAPPC4-205ENST00000525079 KLHDC4Q8TBB5 520 aa16.14■□□□□ 0.17
TRAPPC4-205ENST00000525079 GLIS2Q9BZE0 524 aaPredicted RBP16.14■□□□□ 0.17
TRAPPC4-205ENST00000525079 PSME4Q14997 1843 aa16.13■□□□□ 0.17
TRAPPC4-205ENST00000525079 LRRC24Q50LG9 513 aa16.13■□□□□ 0.17
TRAPPC4-205ENST00000525079 PGAP2Q9UHJ9 254 aa16.13■□□□□ 0.17
TRAPPC4-205ENST00000525079 KIF16BQ96L93 1317 aa16.13■□□□□ 0.17
TRAPPC4-205ENST00000525079 UBTFL1P0CB47 393 aaPredicted RBP16.12■□□□□ 0.17
TRAPPC4-205ENST00000525079 DACT2Q5SW24 774 aa16.12■□□□□ 0.17
TRAPPC4-205ENST00000525079 DLK2Q6UY11 383 aa16.12■□□□□ 0.17
TRAPPC4-205ENST00000525079 AGBL3Q8NEM8 1001 aa16.12■□□□□ 0.17
TRAPPC4-205ENST00000525079 ZC3H15Q8WU90 426 aaKnown RBP16.12■□□□□ 0.17
TRAPPC4-205ENST00000525079 ARHGAP45Q92619 1136 aa16.12■□□□□ 0.17
TRAPPC4-205ENST00000525079 GMLQ99445 158 aa16.12■□□□□ 0.17
TRAPPC4-205ENST00000525079 CD209Q9NNX6 404 aa16.12■□□□□ 0.17
TRAPPC4-205ENST00000525079 RIPOR2Q9Y4F9 1068 aa16.12■□□□□ 0.17
TRAPPC4-205ENST00000525079 IRS2Q9Y4H2 1338 aa16.12■□□□□ 0.17
TRAPPC4-205ENST00000525079 IPO8O15397 1037 aaKnown RBP16.11■□□□□ 0.17
TRAPPC4-205ENST00000525079 USP17L8P0C7I0 530 aa16.11■□□□□ 0.17
TRAPPC4-205ENST00000525079 GTF2IP78347 998 aa16.11■□□□□ 0.17
TRAPPC4-205ENST00000525079 KIF4BQ2VIQ3 1234 aa16.11■□□□□ 0.17
TRAPPC4-205ENST00000525079 TTLL5Q6EMB2 1281 aa16.11■□□□□ 0.17
TRAPPC4-205ENST00000525079 USP48Q86UV5 1035 aa16.11■□□□□ 0.17
TRAPPC4-205ENST00000525079 CLUAP1Q96AJ1 413 aa16.11■□□□□ 0.17
TRAPPC4-205ENST00000525079 MEIS3Q99687 375 aa16.11■□□□□ 0.17
TRAPPC4-205ENST00000525079 ASTN2O75129 1339 aaPredicted RBP16.11■□□□□ 0.17
TRAPPC4-205ENST00000525079 ZBED9Q6R2W3 1325 aa16.11■□□□□ 0.17
TRAPPC4-205ENST00000525079 TRIM27P14373 513 aa16.1■□□□□ 0.17
TRAPPC4-205ENST00000525079 ZNF280AP59817 542 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC4-205ENST00000525079 STRIP1Q5VSL9 837 aa16.1■□□□□ 0.17
TRAPPC4-205ENST00000525079 CST9Q5W186 159 aa16.1■□□□□ 0.17
TRAPPC4-205ENST00000525079 C15orf52Q6ZUT6 534 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-205ENST00000525079 JMYQ8N9B5 988 aa16.1■□□□□ 0.17
TRAPPC4-205ENST00000525079 ZNF408Q9H9D4 720 aa16.1■□□□□ 0.17
TRAPPC4-205ENST00000525079 ABT1Q9ULW3 272 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-205ENST00000525079 LRRFIP2Q9Y608 721 aaKnown RBP16.1■□□□□ 0.17
TRAPPC4-205ENST00000525079 ZNF646O15015 1829 aaPredicted RBP16.1■□□□□ 0.17
TRAPPC4-205ENST00000525079 RFX5P48382 616 aaPredicted RBP16.09■□□□□ 0.17
TRAPPC4-205ENST00000525079 METTL24Q5JXM2 366 aa16.09■□□□□ 0.17
TRAPPC4-205ENST00000525079 INTS3Q68E01 1043 aaKnown RBP16.09■□□□□ 0.17
TRAPPC4-205ENST00000525079 ATF7IPQ6VMQ6 1270 aa16.09■□□□□ 0.17
TRAPPC4-205ENST00000525079 CDC37L1Q7L3B6 337 aa16.09■□□□□ 0.17
TRAPPC4-205ENST00000525079 ZNF804AQ7Z570 1209 aa16.09■□□□□ 0.17
TRAPPC4-205ENST00000525079 DCPSQ96C86 337 aaKnown RBP16.09■□□□□ 0.17
TRAPPC4-205ENST00000525079 JAG2Q9Y219 1238 aa16.09■□□□□ 0.17
TRAPPC4-205ENST00000525079 MROH5Q6ZUA9 1318 aa16.09■□□□□ 0.17
TRAPPC4-205ENST00000525079 TRPM7Q96QT4 1865 aa16.08■□□□□ 0.17
TRAPPC4-205ENST00000525079 GYG1P46976 350 aa16.08■□□□□ 0.16
TRAPPC4-205ENST00000525079 UBE4AQ14139 1066 aa16.08■□□□□ 0.16
TRAPPC4-205ENST00000525079 SCARF1Q14162 830 aa16.08■□□□□ 0.16
TRAPPC4-205ENST00000525079 MYOZ2Q9NPC6 264 aa16.08■□□□□ 0.16
TRAPPC4-205ENST00000525079 POLR2AP24928 1970 aaKnown RBP16.07■□□□□ 0.16
TRAPPC4-205ENST00000525079 ADM5C9JUS6 153 aa16.07■□□□□ 0.16
TRAPPC4-205ENST00000525079 CELF2O95319 508 aaKnown RBP16.07■□□□□ 0.16
TRAPPC4-205ENST00000525079 IL1R1P14778 569 aa16.07■□□□□ 0.16
TRAPPC4-205ENST00000525079 VEGFBP49765 207 aa16.07■□□□□ 0.16
TRAPPC4-205ENST00000525079 ANGEL2Q5VTE6 544 aaKnown RBP16.07■□□□□ 0.16
TRAPPC4-205ENST00000525079 ZKSCAN2Q63HK3 967 aa16.07■□□□□ 0.16
TRAPPC4-205ENST00000525079 KRT26Q7Z3Y9 468 aa16.07■□□□□ 0.16
TRAPPC4-205ENST00000525079 KIAA0825Q8IV33 1275 aa16.07■□□□□ 0.16
TRAPPC4-205ENST00000525079 GGA3Q9NZ52 723 aa16.07■□□□□ 0.16
TRAPPC4-205ENST00000525079 CNTNAP1P78357 1384 aa16.07■□□□□ 0.16
TRAPPC4-205ENST00000525079 ZNF609O15014 1411 aa16.07■□□□□ 0.16
TRAPPC4-205ENST00000525079 MYO3BQ8WXR4 1341 aa16.06■□□□□ 0.16
TRAPPC4-205ENST00000525079 HIBADHP31937 336 aaKnown RBP16.06■□□□□ 0.16
TRAPPC4-205ENST00000525079 PTPN12Q05209 780 aaKnown RBP16.06■□□□□ 0.16
TRAPPC4-205ENST00000525079 DEFB115Q30KQ5 88 aa16.06■□□□□ 0.16
TRAPPC4-205ENST00000525079 OGFOD1Q8N543 542 aa16.06■□□□□ 0.16
TRAPPC4-205ENST00000525079 CERS5Q8N5B7 392 aa16.06■□□□□ 0.16
TRAPPC4-205ENST00000525079 FAM84BQ96KN1 310 aaPredicted RBP16.06■□□□□ 0.16
TRAPPC4-205ENST00000525079 SIL1Q9H173 461 aa16.06■□□□□ 0.16
TRAPPC4-205ENST00000525079 SCAF8Q9UPN6 1271 aaKnown RBP16.06■□□□□ 0.16
TRAPPC4-205ENST00000525079 F8W031 263 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-205ENST00000525079 EYA2O00167 538 aa16.05■□□□□ 0.16
TRAPPC4-205ENST00000525079 PDE8BO95263 885 aa16.05■□□□□ 0.16
TRAPPC4-205ENST00000525079 NBPF9Q3BBW0 867 aa16.05■□□□□ 0.16
TRAPPC4-205ENST00000525079 PAXIP1Q6ZW49 1069 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-205ENST00000525079 TMEM57Q8N5G2 664 aa16.05■□□□□ 0.16
TRAPPC4-205ENST00000525079 VGLL2Q8N8G2 317 aa16.05■□□□□ 0.16
TRAPPC4-205ENST00000525079 IQSEC3Q9UPP2 1182 aaPredicted RBP16.05■□□□□ 0.16
TRAPPC4-205ENST00000525079 PA2G4Q9UQ80 394 aaKnown RBP16.05■□□□□ 0.16
TRAPPC4-205ENST00000525079 HDAC5Q9UQL6 1122 aa16.05■□□□□ 0.16
TRAPPC4-205ENST00000525079 RASSF10A6NK89 507 aa16.04■□□□□ 0.16
TRAPPC4-205ENST00000525079 SASH1O94885 1247 aa16.04■□□□□ 0.16
TRAPPC4-205ENST00000525079 GNAI3P08754 354 aa16.04■□□□□ 0.16
TRAPPC4-205ENST00000525079 GRM1Q13255 1194 aa16.04■□□□□ 0.16
TRAPPC4-205ENST00000525079 ATG9AQ7Z3C6 839 aa16.04■□□□□ 0.16
TRAPPC4-205ENST00000525079 SULF1Q8IWU6 871 aa16.04■□□□□ 0.16
TRAPPC4-205ENST00000525079 TDRD7Q8NHU6 1098 aaKnown RBP16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms