RNA–Protein interactions for RNA: ENST00000524835.5

TM9SF1-203, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2 BASIC

Gene TM9SF1, Length 1,938 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-203ENST00000524835 CYP46A1Q9Y6A2 500 aa23.18■■□□□ 1.3
TM9SF1-203ENST00000524835 U3KPZ7 1027 aaPredicted RBP23.18■■□□□ 1.3
TM9SF1-203ENST00000524835 PHKA1P46020 1223 aa23.17■■□□□ 1.3
TM9SF1-203ENST00000524835 FAM196AQ6ZSG2 479 aa23.17■■□□□ 1.3
TM9SF1-203ENST00000524835 KRT27Q7Z3Y8 459 aa23.17■■□□□ 1.3
TM9SF1-203ENST00000524835 NYXQ9GZU5 481 aa23.17■■□□□ 1.3
TM9SF1-203ENST00000524835 NUCB2P80303 420 aa23.16■■□□□ 1.3
TM9SF1-203ENST00000524835 LRRFIP1Q32MZ4 808 aaKnown RBP23.16■■□□□ 1.3
TM9SF1-203ENST00000524835 CDC5LQ99459 802 aaKnown RBP23.16■■□□□ 1.3
TM9SF1-203ENST00000524835 ZFYP08048 801 aaPredicted RBP23.16■■□□□ 1.3
TM9SF1-203ENST00000524835 SLC5A1P13866 664 aa23.16■■□□□ 1.3
TM9SF1-203ENST00000524835 PDRG1Q9NUG6 133 aa23.16■■□□□ 1.3
TM9SF1-203ENST00000524835 PSMA5P28066 241 aa23.15■■□□□ 1.3
TM9SF1-203ENST00000524835 COL9A3Q14050 684 aaPredicted RBP23.15■■□□□ 1.3
TM9SF1-203ENST00000524835 DSCC1Q9BVC3 393 aa23.15■■□□□ 1.3
TM9SF1-203ENST00000524835 LIMCH1Q9UPQ0 1083 aa23.15■■□□□ 1.3
TM9SF1-203ENST00000524835 SNAP23O00161 211 aa23.14■■□□□ 1.3
TM9SF1-203ENST00000524835 UQCRFS1P1P0C7P4 283 aa23.14■■□□□ 1.3
TM9SF1-203ENST00000524835 PKP1Q13835 747 aa23.14■■□□□ 1.3
TM9SF1-203ENST00000524835 OSBP2Q969R2 916 aa23.14■■□□□ 1.3
TM9SF1-203ENST00000524835 MYH7P12883 1935 aa23.14■■□□□ 1.3
TM9SF1-203ENST00000524835 A0A1B0GUL6 1792 aa23.14■■□□□ 1.29
TM9SF1-203ENST00000524835 M0R2C6 588 aa23.14■■□□□ 1.29
TM9SF1-203ENST00000524835 GTF2E1P29083 439 aaPredicted RBP23.14■■□□□ 1.29
TM9SF1-203ENST00000524835 CHRNDQ07001 517 aa23.14■■□□□ 1.29
TM9SF1-203ENST00000524835 TRAPPC3LQ5T215 181 aa23.14■■□□□ 1.29
TM9SF1-203ENST00000524835 CLEC17AQ6ZS10 378 aa23.14■■□□□ 1.29
TM9SF1-203ENST00000524835 NBPF5PQ86XG9 351 aaPredicted RBP23.14■■□□□ 1.29
TM9SF1-203ENST00000524835 PHF14O94880 888 aa23.13■■□□□ 1.29
TM9SF1-203ENST00000524835 GBP4Q96PP9 640 aa23.13■■□□□ 1.29
TM9SF1-203ENST00000524835 UBR3Q6ZT12 1888 aa23.13■■□□□ 1.29
TM9SF1-203ENST00000524835 CYP21A2P08686 494 aa23.12■■□□□ 1.29
TM9SF1-203ENST00000524835 RFC4P35249 363 aa23.12■■□□□ 1.29
TM9SF1-203ENST00000524835 HSPD1P10809 573 aaKnown RBP23.12■■□□□ 1.29
TM9SF1-203ENST00000524835 ADRA2BP18089 450 aa23.12■■□□□ 1.29
TM9SF1-203ENST00000524835 KRT32Q14532 448 aa23.12■■□□□ 1.29
TM9SF1-203ENST00000524835 TTF1Q15361 905 aaPredicted RBP23.12■■□□□ 1.29
TM9SF1-203ENST00000524835 ANKRD18AQ8IVF6 992 aa23.12■■□□□ 1.29
TM9SF1-203ENST00000524835 TAF1P21675 1872 aa23.11■■□□□ 1.29
TM9SF1-203ENST00000524835 DDX11L8A8MPP1 907 aa23.11■■□□□ 1.29
TM9SF1-203ENST00000524835 BLOC1S2Q6QNY1 142 aa23.11■■□□□ 1.29
TM9SF1-203ENST00000524835 APPBP2Q92624 585 aa23.11■■□□□ 1.29
TM9SF1-203ENST00000524835 PIH1D3Q9NQM4 214 aaKnown RBP23.11■■□□□ 1.29
TM9SF1-203ENST00000524835 RPS6KB1P23443 525 aa23.1■■□□□ 1.29
TM9SF1-203ENST00000524835 SLC27A3Q5K4L6 730 aa23.1■■□□□ 1.29
TM9SF1-203ENST00000524835 TPTE2Q6XPS3 522 aa23.1■■□□□ 1.29
TM9SF1-203ENST00000524835 LARP6Q9BRS8 491 aaKnown RBP23.1■■□□□ 1.29
TM9SF1-203ENST00000524835 BSDC1Q9NW68 430 aaPredicted RBP23.1■■□□□ 1.29
TM9SF1-203ENST00000524835 ZDHHC9Q9Y397 364 aa23.1■■□□□ 1.29
TM9SF1-203ENST00000524835 TRIM37O94972 964 aa23.1■■□□□ 1.29
TM9SF1-203ENST00000524835 LARGE1O95461 756 aa23.1■■□□□ 1.29
TM9SF1-203ENST00000524835 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.1■■□□□ 1.29
TM9SF1-203ENST00000524835 RASGRF1Q13972 1273 aa23.09■■□□□ 1.29
TM9SF1-203ENST00000524835 WASHC4Q2M389 1173 aa23.09■■□□□ 1.29
TM9SF1-203ENST00000524835 ALDH8A1Q9H2A2 487 aaPredicted RBP23.09■■□□□ 1.29
TM9SF1-203ENST00000524835 CARMIL3Q8ND23 1372 aa23.09■■□□□ 1.29
TM9SF1-203ENST00000524835 FOXP2O15409 715 aa23.08■■□□□ 1.29
TM9SF1-203ENST00000524835 ADD2P35612 726 aa23.08■■□□□ 1.29
TM9SF1-203ENST00000524835 SPATA5Q8NB90 893 aa23.08■■□□□ 1.29
TM9SF1-203ENST00000524835 CELF1Q92879 486 aaKnown RBP23.08■■□□□ 1.29
TM9SF1-203ENST00000524835 NLRP3Q96P20 1036 aa23.08■■□□□ 1.29
TM9SF1-203ENST00000524835 TNRC6CQ9HCJ0 1690 aaKnown RBP23.08■■□□□ 1.29
TM9SF1-203ENST00000524835 MYO5AQ9Y4I1 1855 aaKnown RBP23.08■■□□□ 1.28
TM9SF1-203ENST00000524835 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.08■■□□□ 1.28
TM9SF1-203ENST00000524835 DEKP35659 375 aaKnown RBP23.08■■□□□ 1.28
TM9SF1-203ENST00000524835 PUS7LQ9H0K6 701 aaKnown RBP23.08■■□□□ 1.28
TM9SF1-203ENST00000524835 DOCK2Q92608 1830 aa23.07■■□□□ 1.28
TM9SF1-203ENST00000524835 NFIXQ14938 502 aa23.07■■□□□ 1.28
TM9SF1-203ENST00000524835 ZSCAN25Q6NSZ9 544 aa23.07■■□□□ 1.28
TM9SF1-203ENST00000524835 ZSCAN31Q96LW9 406 aaPredicted RBP23.07■■□□□ 1.28
TM9SF1-203ENST00000524835 SH2B1Q9NRF2 756 aaPredicted RBP23.07■■□□□ 1.28
TM9SF1-203ENST00000524835 BCAMP50895 628 aa23.06■■□□□ 1.28
TM9SF1-203ENST00000524835 RBM6P78332 1123 aaKnown RBP23.06■■□□□ 1.28
TM9SF1-203ENST00000524835 SLC9C2Q5TAH2 1124 aa23.06■■□□□ 1.28
TM9SF1-203ENST00000524835 STOX1Q6ZVD7 989 aa23.06■■□□□ 1.28
TM9SF1-203ENST00000524835 CCDC24Q8N4L8 307 aa23.06■■□□□ 1.28
TM9SF1-203ENST00000524835 NEK1Q96PY6 1258 aa23.06■■□□□ 1.28
TM9SF1-203ENST00000524835 BAG4O95429 457 aaKnown RBP23.06■■□□□ 1.28
TM9SF1-203ENST00000524835 UBE3CQ15386 1083 aa23.06■■□□□ 1.28
TM9SF1-203ENST00000524835 ZNF772Q68DY9 489 aaPredicted RBP23.06■■□□□ 1.28
TM9SF1-203ENST00000524835 TCEANC2Q96MN5 208 aa23.06■■□□□ 1.28
TM9SF1-203ENST00000524835 MINPP1Q9UNW1 487 aa23.06■■□□□ 1.28
TM9SF1-203ENST00000524835 IDH1O75874 414 aaKnown RBP23.05■■□□□ 1.28
TM9SF1-203ENST00000524835 TOB2Q14106 344 aaPredicted RBP23.05■■□□□ 1.28
TM9SF1-203ENST00000524835 ME3Q16798 604 aa23.05■■□□□ 1.28
TM9SF1-203ENST00000524835 TPCN1Q9ULQ1 816 aa23.05■■□□□ 1.28
TM9SF1-203ENST00000524835 ZNF804BA4D1E1 1349 aa23.05■■□□□ 1.28
TM9SF1-203ENST00000524835 A0A0G2JLW4 131 aa23.04■■□□□ 1.28
TM9SF1-203ENST00000524835 BRD1O95696 1058 aa23.04■■□□□ 1.28
TM9SF1-203ENST00000524835 ST3GAL1Q11201 340 aa23.04■■□□□ 1.28
TM9SF1-203ENST00000524835 GSE1Q14687 1217 aa23.04■■□□□ 1.28
TM9SF1-203ENST00000524835 ANKRD1Q15327 319 aa23.04■■□□□ 1.28
TM9SF1-203ENST00000524835 TCRBV5S4A2TA0A5A2 114 aa23.04■■□□□ 1.28
TM9SF1-203ENST00000524835 GPAA1O43292 621 aa23.04■■□□□ 1.28
TM9SF1-203ENST00000524835 PDE6AP16499 860 aa23.04■■□□□ 1.28
TM9SF1-203ENST00000524835 RPS8P62241 208 aaKnown RBP23.04■■□□□ 1.28
TM9SF1-203ENST00000524835 UBE4AQ14139 1066 aa23.04■■□□□ 1.28
TM9SF1-203ENST00000524835 WWC3Q9ULE0 1092 aa23.04■■□□□ 1.28
TM9SF1-203ENST00000524835 TM4SF1P30408 202 aa23.03■■□□□ 1.28
TM9SF1-203ENST00000524835 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms