RNA–Protein interactions for RNA: ENST00000524817.5

SWAP70-203, Transcript of switching B cell complex subunit SWAP70, humanhuman

TSL 1 (best)

Gene SWAP70, Length 3,006 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SWAP70-203ENST00000524817 XAGE2Q96GT9 111 aa16.15■□□□□ 0.18
SWAP70-203ENST00000524817 CHAF1AQ13111 956 aaPredicted RBP16.14■□□□□ 0.17
SWAP70-203ENST00000524817 TNNI3KQ59H18 835 aa16.14■□□□□ 0.17
SWAP70-203ENST00000524817 FPGT-TNNI3KV9GXZ4 949 aa16.14■□□□□ 0.17
SWAP70-203ENST00000524817 DLEC1Q9Y238 1755 aa16.14■□□□□ 0.17
SWAP70-203ENST00000524817 HDAC1Q13547 482 aaPredicted RBP16.14■□□□□ 0.17
SWAP70-203ENST00000524817 C9orf131Q5VYM1 1079 aa16.14■□□□□ 0.17
SWAP70-203ENST00000524817 RTKN2Q8IZC4 609 aa16.14■□□□□ 0.17
SWAP70-203ENST00000524817 ANKRD2Q9GZV1 360 aa16.14■□□□□ 0.17
SWAP70-203ENST00000524817 FKBP4Q02790 459 aaKnown RBP eCLIP16.13■□□□□ 0.17
SWAP70-203ENST00000524817 DBNLQ9UJU6 430 aaKnown RBP16.13■□□□□ 0.17
SWAP70-203ENST00000524817 CCDC88AQ3V6T2 1871 aa16.13■□□□□ 0.17
SWAP70-203ENST00000524817 CIAO1O76071 339 aa16.13■□□□□ 0.17
SWAP70-203ENST00000524817 RGS3P49796 1198 aa16.13■□□□□ 0.17
SWAP70-203ENST00000524817 PUM3Q15397 648 aaKnown RBP16.13■□□□□ 0.17
SWAP70-203ENST00000524817 KIF1BPQ96EK5 621 aa16.13■□□□□ 0.17
SWAP70-203ENST00000524817 FAM84BQ96KN1 310 aaPredicted RBP16.13■□□□□ 0.17
SWAP70-203ENST00000524817 COL4A5P29400 1685 aa16.12■□□□□ 0.17
SWAP70-203ENST00000524817 IARSP41252 1262 aaKnown RBP16.12■□□□□ 0.17
SWAP70-203ENST00000524817 SCARF1Q14162 830 aa16.12■□□□□ 0.17
SWAP70-203ENST00000524817 CLASRPQ8N2M8 674 aaKnown RBP16.12■□□□□ 0.17
SWAP70-203ENST00000524817 EDC3Q96F86 508 aaKnown RBP16.12■□□□□ 0.17
SWAP70-203ENST00000524817 PPP4R2Q9NY27 417 aa16.12■□□□□ 0.17
SWAP70-203ENST00000524817 ZBTB47Q9UFB7 747 aaPredicted RBP16.12■□□□□ 0.17
SWAP70-203ENST00000524817 ATP2B4P23634 1241 aa16.12■□□□□ 0.17
SWAP70-203ENST00000524817 ZBTB12Q9Y330 459 aaPredicted RBP16.12■□□□□ 0.17
SWAP70-203ENST00000524817 GJA3Q9Y6H8 435 aa16.12■□□□□ 0.17
SWAP70-203ENST00000524817 IFIT2P09913 472 aaKnown RBP16.11■□□□□ 0.17
SWAP70-203ENST00000524817 DUOX1Q9NRD9 1551 aa16.11■□□□□ 0.17
SWAP70-203ENST00000524817 YDJCA8MPS7 323 aa16.11■□□□□ 0.17
SWAP70-203ENST00000524817 F8W031 263 aaPredicted RBP16.11■□□□□ 0.17
SWAP70-203ENST00000524817 IFIT1P09914 478 aaKnown RBP16.11■□□□□ 0.17
SWAP70-203ENST00000524817 LPIN2Q92539 896 aa16.11■□□□□ 0.17
SWAP70-203ENST00000524817 DCAF8L1A6NGE4 600 aa16.11■□□□□ 0.17
SWAP70-203ENST00000524817 SLC5A1P13866 664 aa16.11■□□□□ 0.17
SWAP70-203ENST00000524817 FGFR2P21802 821 aa16.11■□□□□ 0.17
SWAP70-203ENST00000524817 TBC1D9Q6ZT07 1266 aa16.11■□□□□ 0.17
SWAP70-203ENST00000524817 PODXL2Q9NZ53 605 aa16.11■□□□□ 0.17
SWAP70-203ENST00000524817 PCNTO95613 3336 aa16.1■□□□□ 0.17
SWAP70-203ENST00000524817 ECE2O60344 883 aa16.1■□□□□ 0.17
SWAP70-203ENST00000524817 GTF2IP78347 998 aa16.1■□□□□ 0.17
SWAP70-203ENST00000524817 CCDC102BQ68D86 513 aa16.1■□□□□ 0.17
SWAP70-203ENST00000524817 BOLA2Q9H3K6 86 aa16.1■□□□□ 0.17
SWAP70-203ENST00000524817 LEMD3Q9Y2U8 911 aa16.1■□□□□ 0.17
SWAP70-203ENST00000524817 HIBADHP31937 336 aaKnown RBP16.1■□□□□ 0.17
SWAP70-203ENST00000524817 UBE4AQ14139 1066 aa16.1■□□□□ 0.17
SWAP70-203ENST00000524817 TMC4Q7Z404 712 aa16.1■□□□□ 0.17
SWAP70-203ENST00000524817 JDP2Q8WYK2 163 aa16.1■□□□□ 0.17
SWAP70-203ENST00000524817 HSP90AB4PQ58FF6 505 aa16.09■□□□□ 0.17
SWAP70-203ENST00000524817 SMC5Q8IY18 1101 aa16.09■□□□□ 0.17
SWAP70-203ENST00000524817 SNED1Q8TER0 1413 aa16.09■□□□□ 0.17
SWAP70-203ENST00000524817 GRIN3BO60391 1043 aa16.09■□□□□ 0.17
SWAP70-203ENST00000524817 CHGBP05060 677 aa16.09■□□□□ 0.17
SWAP70-203ENST00000524817 LMNB1P20700 586 aa16.09■□□□□ 0.17
SWAP70-203ENST00000524817 CD209Q9NNX6 404 aa16.09■□□□□ 0.17
SWAP70-203ENST00000524817 SHTN1A0MZ66 631 aa16.08■□□□□ 0.17
SWAP70-203ENST00000524817 KIAA2012Q0VF49 1180 aa16.08■□□□□ 0.17
SWAP70-203ENST00000524817 CAVIN4Q5BKX8 364 aa16.08■□□□□ 0.17
SWAP70-203ENST00000524817 SOGA3Q5TF21 947 aa16.08■□□□□ 0.17
SWAP70-203ENST00000524817 CC2D2BQ6DHV5 1058 aa16.08■□□□□ 0.17
SWAP70-203ENST00000524817 CHD1LQ86WJ1 897 aa16.08■□□□□ 0.17
SWAP70-203ENST00000524817 DNAJC2Q99543 621 aaKnown RBP16.08■□□□□ 0.17
SWAP70-203ENST00000524817 CHD4Q14839 1912 aa16.08■□□□□ 0.17
SWAP70-203ENST00000524817 DDNO94850 711 aaPredicted RBP16.08■□□□□ 0.16
SWAP70-203ENST00000524817 PDE4AP27815 886 aa16.08■□□□□ 0.16
SWAP70-203ENST00000524817 ERC1Q8IUD2 1116 aa16.08■□□□□ 0.16
SWAP70-203ENST00000524817 NIM1KQ8IY84 436 aa16.08■□□□□ 0.16
SWAP70-203ENST00000524817 GCC1Q96CN9 775 aa16.08■□□□□ 0.16
SWAP70-203ENST00000524817 PSMD1Q99460 953 aa16.08■□□□□ 0.16
SWAP70-203ENST00000524817 AKAP2Q9Y2D5 859 aa16.08■□□□□ 0.16
SWAP70-203ENST00000524817 RAB11FIP3O75154 756 aa16.08■□□□□ 0.16
SWAP70-203ENST00000524817 GRIK5Q16478 980 aa16.08■□□□□ 0.16
SWAP70-203ENST00000524817 SLFNL1Q499Z3 407 aa16.08■□□□□ 0.16
SWAP70-203ENST00000524817 ZNF541Q9H0D2 1346 aa16.07■□□□□ 0.16
SWAP70-203ENST00000524817 TTC39AQ5SRH9 613 aa16.07■□□□□ 0.16
SWAP70-203ENST00000524817 EYA3Q99504 573 aa16.07■□□□□ 0.16
SWAP70-203ENST00000524817 ABCF2Q9UG63 623 aa16.07■□□□□ 0.16
SWAP70-203ENST00000524817 FER1L6Q2WGJ9 1857 aa16.07■□□□□ 0.16
SWAP70-203ENST00000524817 RTFDC1Q9BY42 306 aaPredicted RBP16.07■□□□□ 0.16
SWAP70-203ENST00000524817 ANTXR1Q9H6X2 564 aa16.07■□□□□ 0.16
SWAP70-203ENST00000524817 SCAF8Q9UPN6 1271 aaKnown RBP16.07■□□□□ 0.16
SWAP70-203ENST00000524817 RASGRF1Q13972 1273 aa16.06■□□□□ 0.16
SWAP70-203ENST00000524817 KDM2BQ8NHM5 1336 aa16.06■□□□□ 0.16
SWAP70-203ENST00000524817 ARFGEF1Q9Y6D6 1849 aa16.06■□□□□ 0.16
SWAP70-203ENST00000524817 CXCL9Q07325 125 aa16.06■□□□□ 0.16
SWAP70-203ENST00000524817 AAMPQ13685 434 aa16.06■□□□□ 0.16
SWAP70-203ENST00000524817 TTLL5Q6EMB2 1281 aa16.06■□□□□ 0.16
SWAP70-203ENST00000524817 FBXO3Q9UK99 471 aa16.06■□□□□ 0.16
SWAP70-203ENST00000524817 ZNF609O15014 1411 aa16.06■□□□□ 0.16
SWAP70-203ENST00000524817 MCAMP43121 646 aa16.05■□□□□ 0.16
SWAP70-203ENST00000524817 NUCB1Q02818 461 aa16.05■□□□□ 0.16
SWAP70-203ENST00000524817 PSMD14O00487 310 aa16.05■□□□□ 0.16
SWAP70-203ENST00000524817 RBM26Q5T8P6 1007 aaKnown RBP16.05■□□□□ 0.16
SWAP70-203ENST00000524817 ZNF804AQ7Z570 1209 aa16.05■□□□□ 0.16
SWAP70-203ENST00000524817 IRS2Q9Y4H2 1338 aa16.05■□□□□ 0.16
SWAP70-203ENST00000524817 LRRC37AA6NMS7 1700 aa16.05■□□□□ 0.16
SWAP70-203ENST00000524817 ZAP70P43403 619 aa16.05■□□□□ 0.16
SWAP70-203ENST00000524817 KIAA0825Q8IV33 1275 aa16.05■□□□□ 0.16
SWAP70-203ENST00000524817 SUPT20HQ8NEM7 779 aa16.05■□□□□ 0.16
SWAP70-203ENST00000524817 SCN9AQ15858 1988 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 71.9 ms