RNA–Protein interactions for RNA: ENST00000524813.2

PCDHB18P-201, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 2,368 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-201ENST00000524813 DDX58O95786 925 aaKnown RBP21.28■■□□□ 1
PCDHB18P-201ENST00000524813 GSDMDP57764 484 aa21.28■■□□□ 1
PCDHB18P-201ENST00000524813 SLFNL1Q499Z3 407 aa21.28■■□□□ 1
PCDHB18P-201ENST00000524813 CTDNEP1O95476 244 aa21.27■■□□□ 1
PCDHB18P-201ENST00000524813 ATP5JP18859 108 aa21.27■■□□□ 1
PCDHB18P-201ENST00000524813 PLEKHO1Q53GL0 409 aaPredicted RBP21.27■■□□□ 1
PCDHB18P-201ENST00000524813 ZNF396Q96N95 335 aaPredicted RBP21.27■■□□□ 1
PCDHB18P-201ENST00000524813 PTPDC1A2A3K4 754 aa21.26■□□□□ 0.99
PCDHB18P-201ENST00000524813 KIF2AO00139 706 aaPredicted RBP21.26■□□□□ 0.99
PCDHB18P-201ENST00000524813 ZNF609O15014 1411 aa21.26■□□□□ 0.99
PCDHB18P-201ENST00000524813 IGKV5-2P06315 115 aa21.26■□□□□ 0.99
PCDHB18P-201ENST00000524813 ME1P48163 572 aa21.26■□□□□ 0.99
PCDHB18P-201ENST00000524813 NBPF11Q86T75 865 aa21.26■□□□□ 0.99
PCDHB18P-201ENST00000524813 NAT10Q9H0A0 1025 aaKnown RBP21.26■□□□□ 0.99
PCDHB18P-201ENST00000524813 DBNLQ9UJU6 430 aaKnown RBP21.26■□□□□ 0.99
PCDHB18P-201ENST00000524813 LTBP4Q8N2S1 1624 aa21.26■□□□□ 0.99
PCDHB18P-201ENST00000524813 COL18A1P39060 1754 aa21.26■□□□□ 0.99
PCDHB18P-201ENST00000524813 NPHP1O15259 732 aa21.26■□□□□ 0.99
PCDHB18P-201ENST00000524813 STOX1Q6ZVD7 989 aa21.26■□□□□ 0.99
PCDHB18P-201ENST00000524813 LMO7Q8WWI1 1683 aa21.26■□□□□ 0.99
PCDHB18P-201ENST00000524813 EPHA10Q5JZY3 1008 aa21.25■□□□□ 0.99
PCDHB18P-201ENST00000524813 OSBPL5Q9H0X9 879 aaPredicted RBP21.25■□□□□ 0.99
PCDHB18P-201ENST00000524813 ABCA3Q99758 1704 aa21.25■□□□□ 0.99
PCDHB18P-201ENST00000524813 HEG1Q9ULI3 1381 aa21.25■□□□□ 0.99
PCDHB18P-201ENST00000524813 ROBO1Q9Y6N7 1651 aa21.25■□□□□ 0.99
PCDHB18P-201ENST00000524813 MRC1P22897 1456 aa21.25■□□□□ 0.99
PCDHB18P-201ENST00000524813 APOBRQ0VD83 1088 aa21.25■□□□□ 0.99
PCDHB18P-201ENST00000524813 MCMDC2Q4G0Z9 681 aa21.25■□□□□ 0.99
PCDHB18P-201ENST00000524813 DNAJC2Q99543 621 aaKnown RBP21.25■□□□□ 0.99
PCDHB18P-201ENST00000524813 C1orf141Q5JVX7 400 aa21.24■□□□□ 0.99
PCDHB18P-201ENST00000524813 ATL3Q6DD88 541 aa21.24■□□□□ 0.99
PCDHB18P-201ENST00000524813 RIC3Q7Z5B4 369 aa21.24■□□□□ 0.99
PCDHB18P-201ENST00000524813 ZNF446Q9NWS9 450 aa21.24■□□□□ 0.99
PCDHB18P-201ENST00000524813 MYH15Q9Y2K3 1946 aa21.24■□□□□ 0.99
PCDHB18P-201ENST00000524813 CAMTA1Q9Y6Y1 1673 aa21.24■□□□□ 0.99
PCDHB18P-201ENST00000524813 NCAPD2Q15021 1401 aa21.24■□□□□ 0.99
PCDHB18P-201ENST00000524813 CCT2P78371 535 aaKnown RBP21.24■□□□□ 0.99
PCDHB18P-201ENST00000524813 E4F1Q66K89 784 aaPredicted RBP21.24■□□□□ 0.99
PCDHB18P-201ENST00000524813 DDX21Q9NR30 783 aaKnown RBP eCLIP21.24■□□□□ 0.99
PCDHB18P-201ENST00000524813 IMPACTQ9P2X3 320 aa21.24■□□□□ 0.99
PCDHB18P-201ENST00000524813 PPFIA3O75145 1194 aa21.23■□□□□ 0.99
PCDHB18P-201ENST00000524813 GUCY1B3Q02153 619 aa21.23■□□□□ 0.99
PCDHB18P-201ENST00000524813 TNNI3KQ59H18 835 aa21.23■□□□□ 0.99
PCDHB18P-201ENST00000524813 DHX32Q7L7V1 743 aaKnown RBP21.23■□□□□ 0.99
PCDHB18P-201ENST00000524813 FPGT-TNNI3KV9GXZ4 949 aa21.23■□□□□ 0.99
PCDHB18P-201ENST00000524813 TFCP2Q12800 502 aa21.23■□□□□ 0.99
PCDHB18P-201ENST00000524813 ILDR1Q86SU0 546 aaPredicted RBP21.23■□□□□ 0.99
PCDHB18P-201ENST00000524813 FMR1NBQ8N0W7 255 aaPredicted RBP21.22■□□□□ 0.99
PCDHB18P-201ENST00000524813 PPP1R13BQ96KQ4 1090 aa21.22■□□□□ 0.99
PCDHB18P-201ENST00000524813 SDF4Q9BRK5 362 aa21.22■□□□□ 0.99
PCDHB18P-201ENST00000524813 ST7Q9NRC1 585 aa21.22■□□□□ 0.99
PCDHB18P-201ENST00000524813 NEURL1BA8MQ27 555 aa21.22■□□□□ 0.99
PCDHB18P-201ENST00000524813 HMGB1P09429 215 aaKnown RBP21.22■□□□□ 0.99
PCDHB18P-201ENST00000524813 PDIA6Q15084 440 aa21.22■□□□□ 0.99
PCDHB18P-201ENST00000524813 AMOTQ4VCS5 1084 aa21.22■□□□□ 0.99
PCDHB18P-201ENST00000524813 MRPS27Q92552 414 aaKnown RBP21.22■□□□□ 0.99
PCDHB18P-201ENST00000524813 SYTL4Q96C24 671 aaPredicted RBP21.22■□□□□ 0.99
PCDHB18P-201ENST00000524813 L2HGDHQ9H9P8 463 aa21.22■□□□□ 0.99
PCDHB18P-201ENST00000524813 NCOA5Q9HCD5 579 aaKnown RBP21.22■□□□□ 0.99
PCDHB18P-201ENST00000524813 PCDHA7Q9UN72 937 aa21.22■□□□□ 0.99
PCDHB18P-201ENST00000524813 RFX7Q2KHR2 1363 aa21.21■□□□□ 0.99
PCDHB18P-201ENST00000524813 SMC2O95347 1197 aa21.21■□□□□ 0.99
PCDHB18P-201ENST00000524813 ERCC6LQ2NKX8 1250 aa21.21■□□□□ 0.99
PCDHB18P-201ENST00000524813 SYT10Q6XYQ8 523 aa21.21■□□□□ 0.99
PCDHB18P-201ENST00000524813 DDX46Q7L014 1031 aaKnown RBP21.21■□□□□ 0.99
PCDHB18P-201ENST00000524813 NAP1L2Q9ULW6 460 aaPredicted RBP21.21■□□□□ 0.99
PCDHB18P-201ENST00000524813 A0A1B0GVL5 298 aa21.21■□□□□ 0.99
PCDHB18P-201ENST00000524813 CSB-PGBD3P0DP91 1061 aa21.21■□□□□ 0.99
PCDHB18P-201ENST00000524813 GCKRQ14397 625 aa21.21■□□□□ 0.99
PCDHB18P-201ENST00000524813 ARMCX5Q6P1M9 558 aa21.21■□□□□ 0.99
PCDHB18P-201ENST00000524813 TMC6Q7Z403 805 aa21.21■□□□□ 0.99
PCDHB18P-201ENST00000524813 XPO4Q9C0E2 1151 aaKnown RBP21.21■□□□□ 0.99
PCDHB18P-201ENST00000524813 NEXNQ0ZGT2 675 aa21.2■□□□□ 0.98
PCDHB18P-201ENST00000524813 CCDC150Q8NCX0 1101 aa21.2■□□□□ 0.98
PCDHB18P-201ENST00000524813 LRRN4CLQ8ND94 238 aa21.2■□□□□ 0.98
PCDHB18P-201ENST00000524813 COPRSQ9NQ92 184 aa21.2■□□□□ 0.98
PCDHB18P-201ENST00000524813 NLRP2Q9NX02 1062 aa21.2■□□□□ 0.98
PCDHB18P-201ENST00000524813 IFNKQ9P0W0 207 aa21.2■□□□□ 0.98
PCDHB18P-201ENST00000524813 CCDC66A2RUB6 948 aa21.19■□□□□ 0.98
PCDHB18P-201ENST00000524813 H2AFXP16104 143 aaPredicted RBP21.19■□□□□ 0.98
PCDHB18P-201ENST00000524813 DPCR1Q3MIW9 517 aa21.19■□□□□ 0.98
PCDHB18P-201ENST00000524813 DBNDD2Q9BQY9 259 aa21.19■□□□□ 0.98
PCDHB18P-201ENST00000524813 SALL1Q9NSC2 1324 aa21.19■□□□□ 0.98
PCDHB18P-201ENST00000524813 NDUFA8P51970 172 aa21.19■□□□□ 0.98
PCDHB18P-201ENST00000524813 HAUS7Q99871 368 aa21.19■□□□□ 0.98
PCDHB18P-201ENST00000524813 PSDA5PKW4 1024 aaPredicted RBP21.18■□□□□ 0.98
PCDHB18P-201ENST00000524813 EXOSC10Q01780 885 aaKnown RBP21.18■□□□□ 0.98
PCDHB18P-201ENST00000524813 BMS1Q14692 1282 aaKnown RBP21.18■□□□□ 0.98
PCDHB18P-201ENST00000524813 ZRSR1Q15695 479 aaKnown RBP21.18■□□□□ 0.98
PCDHB18P-201ENST00000524813 CCDC93Q567U6 631 aa21.18■□□□□ 0.98
PCDHB18P-201ENST00000524813 ADALQ6DHV7 355 aa21.18■□□□□ 0.98
PCDHB18P-201ENST00000524813 MYD88Q99836 296 aa21.18■□□□□ 0.98
PCDHB18P-201ENST00000524813 PRDM11Q9NQV5 511 aa21.18■□□□□ 0.98
PCDHB18P-201ENST00000524813 KIAA1468Q9P260 1216 aa21.18■□□□□ 0.98
PCDHB18P-201ENST00000524813 MYL6BP14649 208 aa21.18■□□□□ 0.98
PCDHB18P-201ENST00000524813 SFPQP23246 707 aaKnown RBP eCLIP21.18■□□□□ 0.98
PCDHB18P-201ENST00000524813 RFX5P48382 616 aaPredicted RBP21.18■□□□□ 0.98
PCDHB18P-201ENST00000524813 PTPN12Q05209 780 aaKnown RBP21.18■□□□□ 0.98
PCDHB18P-201ENST00000524813 CPDO75976 1380 aa21.18■□□□□ 0.98
PCDHB18P-201ENST00000524813 BPIFA3Q9BQP9 254 aa21.17■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms