RNA–Protein interactions for RNA: ENST00000524602.5

CHD7-202, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

TSL 1 (best) BASIC

Gene CHD7, Length 3,456 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-202ENST00000524602 CCDC129Q6ZRS4 1044 aa9.76□□□□□ -0.85
CHD7-202ENST00000524602 NSUN7Q8NE18 718 aaKnown RBP9.76□□□□□ -0.85
CHD7-202ENST00000524602 ZNF396Q96N95 335 aaPredicted RBP9.76□□□□□ -0.85
CHD7-202ENST00000524602 RCOR1Q9UKL0 485 aa9.76□□□□□ -0.85
CHD7-202ENST00000524602 LUZP1Q86V48 1076 aa9.76□□□□□ -0.85
CHD7-202ENST00000524602 SEC62Q99442 399 aaKnown RBP9.76□□□□□ -0.85
CHD7-202ENST00000524602 PCDH11XQ9BZA7 1347 aa9.76□□□□□ -0.85
CHD7-202ENST00000524602 PCDH11YQ9BZA8 1340 aa9.76□□□□□ -0.85
CHD7-202ENST00000524602 SALL1Q9NSC2 1324 aa9.76□□□□□ -0.85
CHD7-202ENST00000524602 ERVV-2B6SEH9 535 aa9.76□□□□□ -0.85
CHD7-202ENST00000524602 MAPK8IP2Q13387 824 aaPredicted RBP9.76□□□□□ -0.85
CHD7-202ENST00000524602 STOX1Q6ZVD7 989 aa9.76□□□□□ -0.85
CHD7-202ENST00000524602 CKAP2LQ8IYA6 745 aa9.76□□□□□ -0.85
CHD7-202ENST00000524602 RGS22Q8NE09 1264 aa9.76□□□□□ -0.85
CHD7-202ENST00000524602 CHMP3Q9Y3E7 222 aa9.76□□□□□ -0.85
CHD7-202ENST00000524602 ABCC12Q96J65 1359 aa9.75□□□□□ -0.85
CHD7-202ENST00000524602 EYA2O00167 538 aa9.75□□□□□ -0.85
CHD7-202ENST00000524602 DTNBO60941 627 aa9.75□□□□□ -0.85
CHD7-202ENST00000524602 ZNF165P49910 485 aa9.75□□□□□ -0.85
CHD7-202ENST00000524602 ZNF75DP51815 510 aa9.75□□□□□ -0.85
CHD7-202ENST00000524602 SARM1Q6SZW1 724 aa9.75□□□□□ -0.85
CHD7-202ENST00000524602 KCPQ6ZWJ8 1503 aa9.75□□□□□ -0.85
CHD7-202ENST00000524602 GOLIM4O00461 696 aa9.75□□□□□ -0.85
CHD7-202ENST00000524602 RNF113AO15541 343 aaKnown RBP9.75□□□□□ -0.85
CHD7-202ENST00000524602 ADD1P35611 737 aaKnown RBP9.75□□□□□ -0.85
CHD7-202ENST00000524602 EVCP57679 992 aa9.75□□□□□ -0.85
CHD7-202ENST00000524602 PTPDC1A2A3K4 754 aa9.75□□□□□ -0.85
CHD7-202ENST00000524602 HSPD1P10809 573 aaKnown RBP9.75□□□□□ -0.85
CHD7-202ENST00000524602 MPNDQ8N594 471 aa9.75□□□□□ -0.85
CHD7-202ENST00000524602 SPC24Q8NBT2 197 aa9.75□□□□□ -0.85
CHD7-202ENST00000524602 JARID2Q92833 1246 aaPredicted RBP9.75□□□□□ -0.85
CHD7-202ENST00000524602 CTNNA3Q9UI47 895 aa9.75□□□□□ -0.85
CHD7-202ENST00000524602 PYCARDQ9ULZ3 195 aa9.75□□□□□ -0.85
CHD7-202ENST00000524602 DDX60Q8IY21 1712 aaKnown RBP9.74□□□□□ -0.85
CHD7-202ENST00000524602 SHANK3Q9BYB0 1731 aa9.74□□□□□ -0.85
CHD7-202ENST00000524602 NBPF26B4DH59 902 aa9.74□□□□□ -0.85
CHD7-202ENST00000524602 E7EWF7 191 aa9.74□□□□□ -0.85
CHD7-202ENST00000524602 ZFYP08048 801 aaPredicted RBP9.74□□□□□ -0.85
CHD7-202ENST00000524602 STX1AQ16623 288 aa9.74□□□□□ -0.85
CHD7-202ENST00000524602 NBPF14Q5TI25 921 aa9.74□□□□□ -0.85
CHD7-202ENST00000524602 NBPF10Q6P3W6 841 aaKnown RBP9.74□□□□□ -0.85
CHD7-202ENST00000524602 NBPF15Q8N660 670 aa9.74□□□□□ -0.85
CHD7-202ENST00000524602 NEUROD6Q96NK8 337 aa9.74□□□□□ -0.85
CHD7-202ENST00000524602 TRIM5Q9C035 493 aa9.74□□□□□ -0.85
CHD7-202ENST00000524602 STRN4Q9NRL3 753 aa9.74□□□□□ -0.85
CHD7-202ENST00000524602 NDUFB9Q9Y6M9 179 aa9.74□□□□□ -0.85
CHD7-202ENST00000524602 NEMFO60524 1076 aa9.74□□□□□ -0.85
CHD7-202ENST00000524602 CTDNEP1O95476 244 aa9.74□□□□□ -0.85
CHD7-202ENST00000524602 IFIT1P09914 478 aaKnown RBP9.74□□□□□ -0.85
CHD7-202ENST00000524602 CCDC73Q6ZRK6 1079 aa9.74□□□□□ -0.85
CHD7-202ENST00000524602 DDX11Q96FC9 970 aa9.74□□□□□ -0.85
CHD7-202ENST00000524602 PIP4K2AP48426 406 aaPredicted RBP9.73□□□□□ -0.85
CHD7-202ENST00000524602 NKX1-1Q15270 411 aaPredicted RBP9.73□□□□□ -0.85
CHD7-202ENST00000524602 AKAP2Q9Y2D5 859 aa9.73□□□□□ -0.85
CHD7-202ENST00000524602 MAST3O60307 1309 aa9.73□□□□□ -0.85
CHD7-202ENST00000524602 TNS2Q63HR2 1409 aa9.73□□□□□ -0.85
CHD7-202ENST00000524602 PTGS1P23219 599 aa9.73□□□□□ -0.85
CHD7-202ENST00000524602 FAM160A1Q05DH4 1040 aa9.73□□□□□ -0.85
CHD7-202ENST00000524602 ZCRB1Q8TBF4 217 aaKnown RBP9.73□□□□□ -0.85
CHD7-202ENST00000524602 MRFAP1L1Q96HT8 127 aa9.73□□□□□ -0.85
CHD7-202ENST00000524602 WDR19Q8NEZ3 1342 aa9.73□□□□□ -0.85
CHD7-202ENST00000524602 GOLGA6L19H0YKK7 550 aa9.73□□□□□ -0.85
CHD7-202ENST00000524602 PDIA3P30101 505 aaKnown RBP9.73□□□□□ -0.85
CHD7-202ENST00000524602 APOBRQ0VD83 1088 aa9.73□□□□□ -0.85
CHD7-202ENST00000524602 CCAR1Q8IX12 1150 aaKnown RBP9.73□□□□□ -0.85
CHD7-202ENST00000524602 DRC7Q8IY82 874 aa9.73□□□□□ -0.85
CHD7-202ENST00000524602 C17orf53Q8N3J3 647 aaPredicted RBP9.73□□□□□ -0.85
CHD7-202ENST00000524602 DNAJC25Q9H1X3 360 aa9.73□□□□□ -0.85
CHD7-202ENST00000524602 MYH7P12883 1935 aa9.73□□□□□ -0.85
CHD7-202ENST00000524602 CARMIL3Q8ND23 1372 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 A0A1B0GUL7 405 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 DHX16O60231 1041 aaKnown RBP9.72□□□□□ -0.85
CHD7-202ENST00000524602 IQCB1Q15051 598 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 CCDC186Q7Z3E2 898 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 CCDC94Q9BW85 323 aaPredicted RBP9.72□□□□□ -0.85
CHD7-202ENST00000524602 CARD10Q9BWT7 1032 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 KINO60870 393 aaKnown RBP9.72□□□□□ -0.85
CHD7-202ENST00000524602 IL2RBP14784 551 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 TIMM10P62072 90 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 CCDC158Q5M9N0 1113 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 ZSCAN25Q6NSZ9 544 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 LRRC2Q9BYS8 371 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 ANO10Q9NW15 660 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 CEP126Q9P2H0 1117 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 CLIP2Q9UDT6 1046 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 NWD2Q9ULI1 1742 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 ROBO1Q9Y6N7 1651 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 A0A1W2PQ27 194 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 A0A1W2PQ64 194 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 A0A1W2PQD8 194 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 CHGBP05060 677 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 EVA1CP58658 441 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 SNW1Q13573 536 aaKnown RBP9.72□□□□□ -0.85
CHD7-202ENST00000524602 SYCP1Q15431 976 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 ENGASEQ8NFI3 743 aa9.72□□□□□ -0.85
CHD7-202ENST00000524602 NAT10Q9H0A0 1025 aaKnown RBP9.72□□□□□ -0.85
CHD7-202ENST00000524602 CTIFO43310 598 aaKnown RBP9.71□□□□□ -0.85
CHD7-202ENST00000524602 TRIM28Q13263 835 aaKnown RBP9.71□□□□□ -0.85
CHD7-202ENST00000524602 IMMTQ16891 758 aaKnown RBP9.71□□□□□ -0.85
CHD7-202ENST00000524602 TTLL7Q6ZT98 887 aa9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms