RNA–Protein interactions for RNA: ENST00000524523.1

CTR9-202, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 5

Gene CTR9, Length 902 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-202ENST00000524523 METTL22Q9BUU2 404 aaPredicted RBP9.27□□□□□ -0.93
CTR9-202ENST00000524523 C1orf115Q9H7X2 142 aa9.27□□□□□ -0.93
CTR9-202ENST00000524523 EVA1BQ9NVM1 165 aa9.27□□□□□ -0.93
CTR9-202ENST00000524523 BTG4Q9NY30 223 aa9.27□□□□□ -0.93
CTR9-202ENST00000524523 MAP3K2Q9Y2U5 619 aa9.27□□□□□ -0.93
CTR9-202ENST00000524523 DISP2A7MBM2 1401 aa9.27□□□□□ -0.93
CTR9-202ENST00000524523 COL14A1Q05707 1796 aaKnown RBP9.27□□□□□ -0.93
CTR9-202ENST00000524523 TNS2Q63HR2 1409 aa9.26□□□□□ -0.93
CTR9-202ENST00000524523 EXOC5O00471 708 aa9.26□□□□□ -0.93
CTR9-202ENST00000524523 RTL5Q5HYW3 569 aaPredicted RBP9.26□□□□□ -0.93
CTR9-202ENST00000524523 TTC22Q5TAA0 569 aa9.26□□□□□ -0.93
CTR9-202ENST00000524523 CASC1Q6TDU7 716 aa9.26□□□□□ -0.93
CTR9-202ENST00000524523 TICAM2Q86XR7 235 aa9.26□□□□□ -0.93
CTR9-202ENST00000524523 PROCA1Q8NCQ7 364 aaPredicted RBP9.26□□□□□ -0.93
CTR9-202ENST00000524523 KIF1BPQ96EK5 621 aa9.26□□□□□ -0.93
CTR9-202ENST00000524523 GOPCQ9HD26 462 aa9.26□□□□□ -0.93
CTR9-202ENST00000524523 C9orf78Q9NZ63 289 aaPredicted RBP9.26□□□□□ -0.93
CTR9-202ENST00000524523 ABCA3Q99758 1704 aa9.25□□□□□ -0.93
CTR9-202ENST00000524523 GRM8O00222 908 aa9.25□□□□□ -0.93
CTR9-202ENST00000524523 CDC45O75419 566 aa9.25□□□□□ -0.93
CTR9-202ENST00000524523 PRR20EP86478 221 aa9.25□□□□□ -0.93
CTR9-202ENST00000524523 PRR20CP86479 221 aa9.25□□□□□ -0.93
CTR9-202ENST00000524523 PRR20DP86480 221 aa9.25□□□□□ -0.93
CTR9-202ENST00000524523 PRR20BP86481 221 aa9.25□□□□□ -0.93
CTR9-202ENST00000524523 PRR20AP86496 221 aa9.25□□□□□ -0.93
CTR9-202ENST00000524523 FOXC1Q12948 553 aa9.25□□□□□ -0.93
CTR9-202ENST00000524523 TRIM28Q13263 835 aaKnown RBP9.25□□□□□ -0.93
CTR9-202ENST00000524523 SLC39A6Q13433 755 aa9.25□□□□□ -0.93
CTR9-202ENST00000524523 USP16Q9Y5T5 823 aa9.25□□□□□ -0.93
CTR9-202ENST00000524523 LRRFIP2Q9Y608 721 aaKnown RBP9.25□□□□□ -0.93
CTR9-202ENST00000524523 ROBO1Q9Y6N7 1651 aa9.24□□□□□ -0.93
CTR9-202ENST00000524523 STARD3NLO95772 234 aa9.24□□□□□ -0.93
CTR9-202ENST00000524523 CTHP32929 405 aa9.24□□□□□ -0.93
CTR9-202ENST00000524523 PDE1AP54750 535 aa9.24□□□□□ -0.93
CTR9-202ENST00000524523 KCNH2Q12809 1159 aa9.24□□□□□ -0.93
CTR9-202ENST00000524523 TRIM67Q6ZTA4 783 aa9.24□□□□□ -0.93
CTR9-202ENST00000524523 COPS6Q7L5N1 327 aa9.24□□□□□ -0.93
CTR9-202ENST00000524523 PPP1R42Q7Z4L9 355 aa9.24□□□□□ -0.93
CTR9-202ENST00000524523 PCMTD1Q96MG8 357 aaPredicted RBP9.24□□□□□ -0.93
CTR9-202ENST00000524523 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.24□□□□□ -0.93
CTR9-202ENST00000524523 STRN4Q9NRL3 753 aa9.24□□□□□ -0.93
CTR9-202ENST00000524523 TMOD3Q9NYL9 352 aa9.24□□□□□ -0.93
CTR9-202ENST00000524523 SALL3Q9BXA9 1300 aa9.24□□□□□ -0.93
CTR9-202ENST00000524523 LRP6O75581 1613 aa9.23□□□□□ -0.93
CTR9-202ENST00000524523 PNMA6EA0A0J9YXQ4 647 aa9.23□□□□□ -0.93
CTR9-202ENST00000524523 NEURL1BA8MQ27 555 aa9.23□□□□□ -0.93
CTR9-202ENST00000524523 TNFRSF10AO00220 468 aa9.23□□□□□ -0.93
CTR9-202ENST00000524523 GDF9O60383 454 aa9.23□□□□□ -0.93
CTR9-202ENST00000524523 NBPF7P0C2Y1 421 aaPredicted RBP9.23□□□□□ -0.93
CTR9-202ENST00000524523 WNT7BP56706 349 aa9.23□□□□□ -0.93
CTR9-202ENST00000524523 MYT1Q01538 1121 aa9.23□□□□□ -0.93
CTR9-202ENST00000524523 GCKRQ14397 625 aa9.23□□□□□ -0.93
CTR9-202ENST00000524523 PTCRAQ6ISU1 281 aaPredicted RBP9.23□□□□□ -0.93
CTR9-202ENST00000524523 Q6ZNB5 142 aa9.23□□□□□ -0.93
CTR9-202ENST00000524523 DDX54Q8TDD1 881 aaKnown RBP9.23□□□□□ -0.93
CTR9-202ENST00000524523 XAGE3Q8WTP9 111 aa9.23□□□□□ -0.93
CTR9-202ENST00000524523 ANP32EQ9BTT0 268 aa9.23□□□□□ -0.93
CTR9-202ENST00000524523 C22orf23Q9BZE7 217 aa9.23□□□□□ -0.93
CTR9-202ENST00000524523 ATG3Q9NT62 314 aa9.23□□□□□ -0.93
CTR9-202ENST00000524523 USP35Q9P2H5 1018 aa9.23□□□□□ -0.93
CTR9-202ENST00000524523 USP42Q9H9J4 1324 aaKnown RBP9.23□□□□□ -0.93
CTR9-202ENST00000524523 SRGAP3O43295 1099 aa9.22□□□□□ -0.93
CTR9-202ENST00000524523 REC8O95072 547 aa9.22□□□□□ -0.93
CTR9-202ENST00000524523 IGKV5-2P06315 115 aa9.22□□□□□ -0.93
CTR9-202ENST00000524523 PROSER3Q2NL68 480 aa9.22□□□□□ -0.93
CTR9-202ENST00000524523 NPM2Q86SE8 214 aaKnown RBP9.22□□□□□ -0.93
CTR9-202ENST00000524523 CCDC191Q8NCU4 936 aa9.22□□□□□ -0.93
CTR9-202ENST00000524523 SNX21Q969T3 373 aa9.22□□□□□ -0.93
CTR9-202ENST00000524523 UNC93B1Q9H1C4 597 aa9.22□□□□□ -0.93
CTR9-202ENST00000524523 PKD2L1Q9P0L9 805 aa9.22□□□□□ -0.93
CTR9-202ENST00000524523 SPATA31A1Q5TZJ5 1347 aa9.22□□□□□ -0.93
CTR9-202ENST00000524523 TTC41PQ6P2S7 1318 aa9.22□□□□□ -0.93
CTR9-202ENST00000524523 PRAMEF22A3QJZ6 481 aa9.21□□□□□ -0.94
CTR9-202ENST00000524523 SURF6O75683 361 aaKnown RBP9.21□□□□□ -0.94
CTR9-202ENST00000524523 MX1P20591 662 aa9.21□□□□□ -0.94
CTR9-202ENST00000524523 RABL6Q3YEC7 729 aaPredicted RBP9.21□□□□□ -0.94
CTR9-202ENST00000524523 PPP2R2DQ66LE6 453 aa9.21□□□□□ -0.94
CTR9-202ENST00000524523 TBC1D9Q6ZT07 1266 aa9.21□□□□□ -0.94
CTR9-202ENST00000524523 RHPN1Q8TCX5 695 aa9.21□□□□□ -0.94
CTR9-202ENST00000524523 SPATA31A5Q5VU36 1347 aa9.21□□□□□ -0.94
CTR9-202ENST00000524523 SPATA31A7Q8IWB4 1347 aa9.21□□□□□ -0.94
CTR9-202ENST00000524523 VIRMAQ69YN4 1812 aaKnown RBP9.21□□□□□ -0.94
CTR9-202ENST00000524523 BCL9O00512 1426 aa9.21□□□□□ -0.94
CTR9-202ENST00000524523 H7C1W4 665 aa9.2□□□□□ -0.94
CTR9-202ENST00000524523 WNT7AO00755 349 aa9.2□□□□□ -0.94
CTR9-202ENST00000524523 ERC2O15083 957 aa9.2□□□□□ -0.94
CTR9-202ENST00000524523 GSPT1P15170 499 aaKnown RBP9.2□□□□□ -0.94
CTR9-202ENST00000524523 HSP90AB3PQ58FF7 597 aa9.2□□□□□ -0.94
CTR9-202ENST00000524523 CLASRPQ8N2M8 674 aaKnown RBP9.2□□□□□ -0.94
CTR9-202ENST00000524523 PIGBQ92521 554 aa9.2□□□□□ -0.94
CTR9-202ENST00000524523 GPATCH3Q96I76 525 aa9.2□□□□□ -0.94
CTR9-202ENST00000524523 COPRSQ9NQ92 184 aa9.2□□□□□ -0.94
CTR9-202ENST00000524523 SPATA31A6Q5VVP1 1343 aa9.2□□□□□ -0.94
CTR9-202ENST00000524523 SLIT2O94813 1529 aa9.2□□□□□ -0.94
CTR9-202ENST00000524523 KCPQ6ZWJ8 1503 aa9.2□□□□□ -0.94
CTR9-202ENST00000524523 COL16A1Q07092 1604 aaPredicted RBP9.2□□□□□ -0.94
CTR9-202ENST00000524523 PLCH1Q4KWH8 1693 aa9.2□□□□□ -0.94
CTR9-202ENST00000524523 ERVV-1B6SEH8 477 aa9.19□□□□□ -0.94
CTR9-202ENST00000524523 GLRX3O76003 335 aaKnown RBP9.19□□□□□ -0.94
CTR9-202ENST00000524523 ANXA1P04083 346 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms