RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, humanhuman

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-223ENST00000524356 PAPLNO95428 1278 aa8.39□□□□□ -1.07
PCM1-223ENST00000524356 MAP4P27816 1152 aaKnown RBP8.39□□□□□ -1.07
PCM1-223ENST00000524356 DPYDQ12882 1025 aa8.39□□□□□ -1.07
PCM1-223ENST00000524356 SGO2Q562F6 1265 aa8.39□□□□□ -1.07
PCM1-223ENST00000524356 WWC1Q8IX03 1113 aa8.39□□□□□ -1.07
PCM1-223ENST00000524356 CCER1Q8TC90 406 aaPredicted RBP8.39□□□□□ -1.07
PCM1-223ENST00000524356 RASSF4Q9H2L5 321 aa8.39□□□□□ -1.07
PCM1-223ENST00000524356 SMNDC1O75940 238 aaKnown RBP eCLIP8.38□□□□□ -1.075e-7■□□□□ 10
PCM1-223ENST00000524356 CRTC2Q53ET0 693 aaPredicted RBP8.38□□□□□ -1.07
PCM1-223ENST00000524356 OSBPL1AQ9BXW6 950 aa8.38□□□□□ -1.07
PCM1-223ENST00000524356 RNF208Q9H0X6 261 aa8.38□□□□□ -1.07
PCM1-223ENST00000524356 DBX1A6NMT0 343 aa8.37□□□□□ -1.07
PCM1-223ENST00000524356 FOXO3O43524 673 aa8.37□□□□□ -1.07
PCM1-223ENST00000524356 PTK7Q13308 1070 aa8.37□□□□□ -1.07
PCM1-223ENST00000524356 CPSF6Q16630 551 aaKnown RBP eCLIP8.37□□□□□ -1.07
PCM1-223ENST00000524356 FAM117BQ6P1L5 589 aa8.37□□□□□ -1.07
PCM1-223ENST00000524356 GIMAP7Q8NHV1 300 aa8.37□□□□□ -1.07
PCM1-223ENST00000524356 SEC31BQ9NQW1 1179 aa8.37□□□□□ -1.07
PCM1-223ENST00000524356 WEE1P30291 646 aa8.36□□□□□ -1.07
PCM1-223ENST00000524356 PAK6Q9NQU5 681 aaPredicted RBP8.36□□□□□ -1.07
PCM1-223ENST00000524356 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.36□□□□□ -1.07
PCM1-223ENST00000524356 HYAL2Q12891 473 aa8.35□□□□□ -1.07
PCM1-223ENST00000524356 FDX2Q6P4F2 183 aa8.35□□□□□ -1.07
PCM1-223ENST00000524356 RUSC1Q9BVN2 902 aa8.35□□□□□ -1.07
PCM1-223ENST00000524356 BSDC1Q9NW68 430 aaPredicted RBP8.35□□□□□ -1.07
PCM1-223ENST00000524356 GAS2O43903 313 aaKnown RBP8.34□□□□□ -1.07
PCM1-223ENST00000524356 NLRP12P59046 1061 aa8.34□□□□□ -1.07
PCM1-223ENST00000524356 LARP1Q6PKG0 1096 aaKnown RBP8.34□□□□□ -1.07
PCM1-223ENST00000524356 SPACA7Q96KW9 195 aa8.34□□□□□ -1.07
PCM1-223ENST00000524356 ZMYND15Q9H091 742 aa8.34□□□□□ -1.07
PCM1-223ENST00000524356 MAFBQ9Y5Q3 323 aaPredicted RBP8.34□□□□□ -1.07
PCM1-223ENST00000524356 LCE5AQ5TCM9 118 aa8.33□□□□□ -1.08
PCM1-223ENST00000524356 ETFBKMTQ8IXQ9 262 aa8.33□□□□□ -1.08
PCM1-223ENST00000524356 FLCNQ8NFG4 579 aa8.33□□□□□ -1.08
PCM1-223ENST00000524356 VTI1AQ96AJ9 217 aa8.33□□□□□ -1.08
PCM1-223ENST00000524356 ADAM19Q9H013 955 aa8.33□□□□□ -1.08
PCM1-223ENST00000524356 CARMIL2Q6F5E8 1435 aa8.32□□□□□ -1.08
PCM1-223ENST00000524356 KIF4AO95239 1232 aa8.32□□□□□ -1.08
PCM1-223ENST00000524356 TPRNQ4KMQ1 711 aa8.32□□□□□ -1.08
PCM1-223ENST00000524356 COX20Q5RI15 118 aa8.32□□□□□ -1.08
PCM1-223ENST00000524356 AGBL5Q8NDL9 886 aa8.32□□□□□ -1.08
PCM1-223ENST00000524356 PBX4Q9BYU1 374 aa8.32□□□□□ -1.08
PCM1-223ENST00000524356 TFIP11Q9UBB9 837 aaKnown RBP8.32□□□□□ -1.08
PCM1-223ENST00000524356 H3BRJ5 948 aa8.31□□□□□ -1.08
PCM1-223ENST00000524356 PTPRAP18433 802 aa8.31□□□□□ -1.08
PCM1-223ENST00000524356 PIP4K2BP78356 416 aa8.31□□□□□ -1.08
PCM1-223ENST00000524356 ANKMY2Q8IV38 441 aa8.31□□□□□ -1.08
PCM1-223ENST00000524356 POP1Q99575 1024 aaKnown RBP8.31□□□□□ -1.08
PCM1-223ENST00000524356 MEGF11A6BM72 1044 aa8.3□□□□□ -1.08
PCM1-223ENST00000524356 UBAP1LF5GYI3 381 aa8.3□□□□□ -1.08
PCM1-223ENST00000524356 CYP26A1O43174 497 aa8.3□□□□□ -1.08
PCM1-223ENST00000524356 RXRBP28702 533 aa8.3□□□□□ -1.08
PCM1-223ENST00000524356 ADMP35318 185 aa8.3□□□□□ -1.08
PCM1-223ENST00000524356 FAM26DQ5JW98 314 aa8.3□□□□□ -1.08
PCM1-223ENST00000524356 WNT8BQ93098 351 aa8.3□□□□□ -1.08
PCM1-223ENST00000524356 METTL22Q9BUU2 404 aaPredicted RBP8.3□□□□□ -1.08
PCM1-223ENST00000524356 USP17L15C9J2P7 530 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 USP17L10C9JJH3 530 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 USP17L13C9JLJ4 530 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 USP17L12C9JPN9 530 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 USP17L11C9JVI0 530 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 USP17L21D6R901 530 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 USP17L18D6R9N7 530 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 USP17L22D6RA61 530 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 USP17L17D6RBQ6 530 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 USP17L19D6RCP7 530 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 USP17L20D6RJB6 530 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 CYP2E1P05181 493 aaPredicted RBP8.29□□□□□ -1.08
PCM1-223ENST00000524356 SCNN1AP37088 669 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 USP17L24Q0WX57 530 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 KANK4Q5T7N3 995 aaPredicted RBP8.29□□□□□ -1.08
PCM1-223ENST00000524356 CEP120Q8N960 986 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 OSGEPQ9NPF4 335 aa8.29□□□□□ -1.08
PCM1-223ENST00000524356 FAM95CA0A1B0GW59 222 aa8.28□□□□□ -1.08
PCM1-223ENST00000524356 TIAF1O95411 115 aa8.28□□□□□ -1.08
PCM1-223ENST00000524356 ARXQ96QS3 562 aa8.28□□□□□ -1.08
PCM1-223ENST00000524356 NFKBIBQ15653 356 aa8.27□□□□□ -1.09
PCM1-223ENST00000524356 HGSNATQ68CP4 663 aa8.27□□□□□ -1.09
PCM1-223ENST00000524356 CDPF1Q6NVV7 123 aa8.26□□□□□ -1.09
PCM1-223ENST00000524356 ZAR1Q86SH2 424 aa8.26□□□□□ -1.09
PCM1-223ENST00000524356 TMPRSS13Q9BYE2 586 aa8.26□□□□□ -1.09
PCM1-223ENST00000524356 NISCHQ9Y2I1 1504 aa8.25□□□□□ -1.09
PCM1-223ENST00000524356 FAM196BA6NMK8 535 aa8.25□□□□□ -1.09
PCM1-223ENST00000524356 FAM170BA6NMN3 283 aa8.25□□□□□ -1.09
PCM1-223ENST00000524356 FARP2O94887 1054 aaPredicted RBP8.25□□□□□ -1.09
PCM1-223ENST00000524356 TTC39BQ5VTQ0 682 aaPredicted RBP8.25□□□□□ -1.09
PCM1-223ENST00000524356 PAOXQ6QHF9 649 aa8.25□□□□□ -1.09
PCM1-223ENST00000524356 WFDC3Q8IUB2 231 aa8.25□□□□□ -1.09
PCM1-223ENST00000524356 C12orf50Q8NA57 414 aaPredicted RBP8.25□□□□□ -1.09
PCM1-223ENST00000524356 FBLIM1Q8WUP2 373 aa8.25□□□□□ -1.09
PCM1-223ENST00000524356 SLC7A3Q8WY07 619 aa8.25□□□□□ -1.09
PCM1-223ENST00000524356 GATA6Q92908 595 aa8.25□□□□□ -1.09
PCM1-223ENST00000524356 TBC1D32Q96NH3 1257 aa8.25□□□□□ -1.09
PCM1-223ENST00000524356 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.25□□□□□ -1.09
PCM1-223ENST00000524356 PRKAG2Q9UGJ0 569 aa8.25□□□□□ -1.09
PCM1-223ENST00000524356 ZC3H7BQ9UGR2 993 aaKnown RBP8.25□□□□□ -1.09
PCM1-223ENST00000524356 TIMELESSQ9UNS1 1208 aa8.25□□□□□ -1.09
PCM1-223ENST00000524356 A6NJR5 290 aa8.24□□□□□ -1.09
PCM1-223ENST00000524356 RAD21O60216 631 aa8.24□□□□□ -1.09
PCM1-223ENST00000524356 CABP4P57796 275 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 152 ms