RNA–Protein interactions for RNA: ENST00000523557.1

LINC01608-201, Transcript of long intergenic non-protein coding RNA 1608, humanhuman

TSL 4 BASIC

Gene LINC01608, Length 544 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01608-201ENST00000523557 SUV39H2Q9H5I1 410 aa6.92□□□□□ -1.3
LINC01608-201ENST00000523557 PDE2AO00408 941 aaPredicted RBP6.91□□□□□ -1.3
LINC01608-201ENST00000523557 GADD45BO75293 160 aaPredicted RBP6.91□□□□□ -1.3
LINC01608-201ENST00000523557 TRPA1O75762 1119 aa6.91□□□□□ -1.3
LINC01608-201ENST00000523557 GRIK5Q16478 980 aa6.91□□□□□ -1.3
LINC01608-201ENST00000523557 ZNF326Q5BKZ1 582 aaKnown RBP6.91□□□□□ -1.3
LINC01608-201ENST00000523557 CEP135Q66GS9 1140 aa6.91□□□□□ -1.3
LINC01608-201ENST00000523557 PI16Q6UXB8 463 aa6.91□□□□□ -1.3
LINC01608-201ENST00000523557 NXPE3Q969Y0 559 aa6.91□□□□□ -1.3
LINC01608-201ENST00000523557 FRMD6Q96NE9 622 aa6.91□□□□□ -1.3
LINC01608-201ENST00000523557 DUSP9Q99956 384 aaKnown RBP6.91□□□□□ -1.3
LINC01608-201ENST00000523557 BHLHE41Q9C0J9 482 aaPredicted RBP6.91□□□□□ -1.3
LINC01608-201ENST00000523557 RRAGCQ9HB90 399 aa6.91□□□□□ -1.3
LINC01608-201ENST00000523557 RBM47A0AV96 593 aaKnown RBP6.9□□□□□ -1.3
LINC01608-201ENST00000523557 AFF1P51825 1210 aaKnown RBP6.9□□□□□ -1.3
LINC01608-201ENST00000523557 TAGLNQ01995 201 aaKnown RBP6.9□□□□□ -1.3
LINC01608-201ENST00000523557 C8orf86Q6ZUL3 223 aa6.9□□□□□ -1.3
LINC01608-201ENST00000523557 CCNJLQ8IV13 435 aa6.9□□□□□ -1.3
LINC01608-201ENST00000523557 CACTIN-AS1Q8N1I8 211 aa6.9□□□□□ -1.3
LINC01608-201ENST00000523557 FOXD4L4Q8WXT5 416 aaPredicted RBP6.9□□□□□ -1.3
LINC01608-201ENST00000523557 HHIPQ96QV1 700 aa6.9□□□□□ -1.3
LINC01608-201ENST00000523557 TCF12Q99081 682 aa6.9□□□□□ -1.3
LINC01608-201ENST00000523557 POP1Q99575 1024 aaKnown RBP6.9□□□□□ -1.3
LINC01608-201ENST00000523557 EHD4Q9H223 541 aa6.9□□□□□ -1.3
LINC01608-201ENST00000523557 LIN7BQ9HAP6 207 aa6.9□□□□□ -1.3
LINC01608-201ENST00000523557 TRIM33Q9UPN9 1127 aa6.9□□□□□ -1.3
LINC01608-201ENST00000523557 SPG7Q9UQ90 795 aa6.9□□□□□ -1.3
LINC01608-201ENST00000523557 GIPC1O14908 333 aa6.89□□□□□ -1.31
LINC01608-201ENST00000523557 ZNF16P17020 682 aaPredicted RBP6.89□□□□□ -1.31
LINC01608-201ENST00000523557 PTPRAP18433 802 aa6.89□□□□□ -1.31
LINC01608-201ENST00000523557 GNA15P30679 374 aa6.89□□□□□ -1.31
LINC01608-201ENST00000523557 SNRPNP63162 240 aaKnown RBP6.89□□□□□ -1.31
LINC01608-201ENST00000523557 GRM2Q14416 872 aa6.89□□□□□ -1.31
LINC01608-201ENST00000523557 PRPF40BQ6NWY9 871 aaKnown RBP6.89□□□□□ -1.31
LINC01608-201ENST00000523557 PARP2Q9UGN5 583 aa6.89□□□□□ -1.31
LINC01608-201ENST00000523557 ADAMTS8Q9UP79 889 aa6.89□□□□□ -1.31
LINC01608-201ENST00000523557 TRAK1Q9UPV9 953 aa6.89□□□□□ -1.31
LINC01608-201ENST00000523557 NID1P14543 1247 aa6.88□□□□□ -1.31
LINC01608-201ENST00000523557 XPCQ01831 940 aaPredicted RBP6.88□□□□□ -1.31
LINC01608-201ENST00000523557 COL9A3Q14050 684 aaPredicted RBP6.88□□□□□ -1.31
LINC01608-201ENST00000523557 GDF6Q6KF10 455 aaPredicted RBP6.88□□□□□ -1.31
LINC01608-201ENST00000523557 LINC00114Q6XXX2 140 aa6.88□□□□□ -1.31
LINC01608-201ENST00000523557 GLIS3Q8NEA6 775 aa6.88□□□□□ -1.31
LINC01608-201ENST00000523557 BCO2Q9BYV7 579 aa6.88□□□□□ -1.31
LINC01608-201ENST00000523557 SRCIN1Q9C0H9 1055 aa6.88□□□□□ -1.31
LINC01608-201ENST00000523557 ADAM19Q9H013 955 aa6.88□□□□□ -1.31
LINC01608-201ENST00000523557 MKL2Q9ULH7 1088 aa6.88□□□□□ -1.31
LINC01608-201ENST00000523557 PIK3R2O00459 728 aa6.87□□□□□ -1.31
LINC01608-201ENST00000523557 DAB2P98082 770 aa6.87□□□□□ -1.31
LINC01608-201ENST00000523557 MSL1Q68DK7 614 aa6.87□□□□□ -1.31
LINC01608-201ENST00000523557 ADAMTSL4Q6UY14 1074 aa6.87□□□□□ -1.31
LINC01608-201ENST00000523557 TMC4Q7Z404 712 aa6.87□□□□□ -1.31
LINC01608-201ENST00000523557 WFDC8Q8IUA0 241 aa6.87□□□□□ -1.31
LINC01608-201ENST00000523557 ASAP3Q8TDY4 903 aa6.87□□□□□ -1.31
LINC01608-201ENST00000523557 OSBPL7Q9BZF2 842 aa6.87□□□□□ -1.31
LINC01608-201ENST00000523557 LACRTQ9GZZ8 138 aa6.87□□□□□ -1.31
LINC01608-201ENST00000523557 ABCB6Q9NP58 842 aa6.87□□□□□ -1.31
LINC01608-201ENST00000523557 RNF19AQ9NV58 838 aa6.87□□□□□ -1.31
LINC01608-201ENST00000523557 TMEM238LA0A1B0GVL6 79 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 FAM181BA6NEQ2 426 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 FAM177BA6PVY3 158 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 METTL12A8MUP2 240 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 GNB5O14775 395 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 CDC27P30260 824 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 BAG6P46379 1132 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 GRIA4P48058 902 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 PSMD2Q13200 908 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 NXPE4Q6UWF7 544 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 ILDR2Q71H61 639 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 PODNQ7Z5L7 613 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 IL22RA1Q8N6P7 574 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 BSNDQ8WZ55 320 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 BCL11AQ9H165 835 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 C12orf49Q9H741 205 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 PPP4R2Q9NY27 417 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 SOX13Q9UN79 622 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 AK5Q9Y6K8 562 aa6.86□□□□□ -1.31
LINC01608-201ENST00000523557 A0A096LPE4 126 aa6.85□□□□□ -1.31
LINC01608-201ENST00000523557 A0A1W2PPZ6 126 aa6.85□□□□□ -1.31
LINC01608-201ENST00000523557 EIF4BP23588 611 aaKnown RBP6.85□□□□□ -1.31
LINC01608-201ENST00000523557 ITPKAP23677 461 aa6.85□□□□□ -1.31
LINC01608-201ENST00000523557 ITGAEP38570 1179 aa6.85□□□□□ -1.31
LINC01608-201ENST00000523557 PTPN12Q05209 780 aaKnown RBP6.85□□□□□ -1.31
LINC01608-201ENST00000523557 BEND7Q8N7W2 519 aaPredicted RBP6.85□□□□□ -1.31
LINC01608-201ENST00000523557 TRIM11Q96F44 468 aa6.85□□□□□ -1.31
LINC01608-201ENST00000523557 MUC3BQ9H195 1237 aa6.85□□□□□ -1.31
LINC01608-201ENST00000523557 XRCC5P13010 732 aaKnown RBP6.84□□□□□ -1.31
LINC01608-201ENST00000523557 EPHA1P21709 976 aa6.84□□□□□ -1.31
LINC01608-201ENST00000523557 GSTT1P30711 240 aa6.84□□□□□ -1.31
LINC01608-201ENST00000523557 CABP4P57796 275 aa6.84□□□□□ -1.31
LINC01608-201ENST00000523557 SPRED3Q2MJR0 410 aa6.84□□□□□ -1.31
LINC01608-201ENST00000523557 SCARF2Q96GP6 870 aaPredicted RBP6.84□□□□□ -1.31
LINC01608-201ENST00000523557 FAM161BQ96MY7 647 aa6.84□□□□□ -1.31
LINC01608-201ENST00000523557 SH2B1Q9NRF2 756 aaPredicted RBP6.84□□□□□ -1.31
LINC01608-201ENST00000523557 FAM8A1Q9UBU6 413 aa6.84□□□□□ -1.31
LINC01608-201ENST00000523557 STK17AQ9UEE5 414 aa6.84□□□□□ -1.31
LINC01608-201ENST00000523557 PPME1Q9Y570 386 aa6.84□□□□□ -1.31
LINC01608-201ENST00000523557 CNTNAP5Q8WYK1 1306 aa6.83□□□□□ -1.32
LINC01608-201ENST00000523557 SPDYE3A6NKU9 549 aa6.83□□□□□ -1.32
LINC01608-201ENST00000523557 H3BRJ5 948 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms