RNA–Protein interactions for RNA: ENST00000523469.5

CPNE3-206, Transcript of copine 3, humanhuman

TSL 5

Gene CPNE3, Length 656 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-206ENST00000523469 TMEM102Q8N9M5 508 aaPredicted RBP10.33□□□□□ -0.76
CPNE3-206ENST00000523469 NISCHQ9Y2I1 1504 aa10.33□□□□□ -0.76
CPNE3-206ENST00000523469 LDHBP07195 334 aaKnown RBP10.32□□□□□ -0.76
CPNE3-206ENST00000523469 GRIK5Q16478 980 aa10.32□□□□□ -0.76
CPNE3-206ENST00000523469 SCARF2Q96GP6 870 aaPredicted RBP10.32□□□□□ -0.76
CPNE3-206ENST00000523469 NLRP2Q9NX02 1062 aa10.32□□□□□ -0.76
CPNE3-206ENST00000523469 PDE2AO00408 941 aaPredicted RBP10.31□□□□□ -0.76
CPNE3-206ENST00000523469 GNB5O14775 395 aa10.31□□□□□ -0.76
CPNE3-206ENST00000523469 NID1P14543 1247 aa10.31□□□□□ -0.76
CPNE3-206ENST00000523469 COL9A3Q14050 684 aaPredicted RBP10.31□□□□□ -0.76
CPNE3-206ENST00000523469 EPS8L3Q8TE67 593 aaKnown RBP10.31□□□□□ -0.76
CPNE3-206ENST00000523469 POP1Q99575 1024 aaKnown RBP10.31□□□□□ -0.76
CPNE3-206ENST00000523469 WWC3Q9ULE0 1092 aa10.31□□□□□ -0.76
CPNE3-206ENST00000523469 TRIM33Q9UPN9 1127 aa10.31□□□□□ -0.76
CPNE3-206ENST00000523469 GADD45BO75293 160 aaPredicted RBP10.3□□□□□ -0.76
CPNE3-206ENST00000523469 PRPF40AO75400 957 aaKnown RBP10.3□□□□□ -0.76
CPNE3-206ENST00000523469 TRPA1O75762 1119 aa10.3□□□□□ -0.76
CPNE3-206ENST00000523469 PTPRAP18433 802 aa10.3□□□□□ -0.76
CPNE3-206ENST00000523469 IRS1P35568 1242 aa10.3□□□□□ -0.76
CPNE3-206ENST00000523469 GDF6Q6KF10 455 aaPredicted RBP10.3□□□□□ -0.76
CPNE3-206ENST00000523469 FBXO33Q7Z6M2 555 aa10.3□□□□□ -0.76
CPNE3-206ENST00000523469 NXPE3Q969Y0 559 aa10.3□□□□□ -0.76
CPNE3-206ENST00000523469 BHLHE41Q9C0J9 482 aaPredicted RBP10.3□□□□□ -0.76
CPNE3-206ENST00000523469 PODXL2Q9NZ53 605 aa10.3□□□□□ -0.76
CPNE3-206ENST00000523469 CNTNAP5Q8WYK1 1306 aa10.3□□□□□ -0.76
CPNE3-206ENST00000523469 HHIPQ96QV1 700 aa10.29□□□□□ -0.76
CPNE3-206ENST00000523469 SETDB2Q96T68 719 aa10.29□□□□□ -0.76
CPNE3-206ENST00000523469 EHD4Q9H223 541 aa10.29□□□□□ -0.76
CPNE3-206ENST00000523469 SUV39H2Q9H5I1 410 aa10.29□□□□□ -0.76
CPNE3-206ENST00000523469 LIN7BQ9HAP6 207 aa10.29□□□□□ -0.76
CPNE3-206ENST00000523469 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.28□□□□□ -0.76
CPNE3-206ENST00000523469 MSL1Q68DK7 614 aa10.28□□□□□ -0.76
CPNE3-206ENST00000523469 WFDC8Q8IUA0 241 aa10.28□□□□□ -0.76
CPNE3-206ENST00000523469 CCNJLQ8IV13 435 aa10.28□□□□□ -0.76
CPNE3-206ENST00000523469 TRIM11Q96F44 468 aa10.28□□□□□ -0.76
CPNE3-206ENST00000523469 FAM177BA6PVY3 158 aa10.27□□□□□ -0.77
CPNE3-206ENST00000523469 PI16Q6UXB8 463 aa10.27□□□□□ -0.77
CPNE3-206ENST00000523469 IL22RA1Q8N6P7 574 aa10.27□□□□□ -0.77
CPNE3-206ENST00000523469 TCF12Q99081 682 aa10.27□□□□□ -0.77
CPNE3-206ENST00000523469 LACRTQ9GZZ8 138 aa10.27□□□□□ -0.77
CPNE3-206ENST00000523469 ADAM19Q9H013 955 aa10.27□□□□□ -0.77
CPNE3-206ENST00000523469 TRAK1Q9UPV9 953 aa10.27□□□□□ -0.77
CPNE3-206ENST00000523469 SPDYE3A6NKU9 549 aa10.26□□□□□ -0.77
CPNE3-206ENST00000523469 CDC27P30260 824 aa10.26□□□□□ -0.77
CPNE3-206ENST00000523469 PLVAPQ9BX97 442 aa10.26□□□□□ -0.77
CPNE3-206ENST00000523469 BCL2L13Q9BXK5 485 aa10.26□□□□□ -0.77
CPNE3-206ENST00000523469 MUC3BQ9H195 1237 aa10.26□□□□□ -0.77
CPNE3-206ENST00000523469 NOP53Q9NZM5 478 aaKnown RBP10.26□□□□□ -0.77
CPNE3-206ENST00000523469 GIPC1O14908 333 aa10.25□□□□□ -0.77
CPNE3-206ENST00000523469 BAG6P46379 1132 aa10.25□□□□□ -0.77
CPNE3-206ENST00000523469 GRM2Q14416 872 aa10.25□□□□□ -0.77
CPNE3-206ENST00000523469 TRAPPC3LQ5T215 181 aa10.25□□□□□ -0.77
CPNE3-206ENST00000523469 PRPF40BQ6NWY9 871 aaKnown RBP10.25□□□□□ -0.77
CPNE3-206ENST00000523469 ILDR2Q71H61 639 aa10.25□□□□□ -0.77
CPNE3-206ENST00000523469 BSNDQ8WZ55 320 aa10.25□□□□□ -0.77
CPNE3-206ENST00000523469 FRMD6Q96NE9 622 aa10.25□□□□□ -0.77
CPNE3-206ENST00000523469 PPP4R2Q9NY27 417 aa10.25□□□□□ -0.77
CPNE3-206ENST00000523469 SPG7Q9UQ90 795 aa10.25□□□□□ -0.77
CPNE3-206ENST00000523469 RNF225M0QZC1 329 aaPredicted RBP10.24□□□□□ -0.77
CPNE3-206ENST00000523469 ADAMTSL4Q6UY14 1074 aa10.24□□□□□ -0.77
CPNE3-206ENST00000523469 DMRTC2Q8IXT2 367 aaPredicted RBP10.24□□□□□ -0.77
CPNE3-206ENST00000523469 ASAP3Q8TDY4 903 aa10.24□□□□□ -0.77
CPNE3-206ENST00000523469 DUSP9Q99956 384 aaKnown RBP10.24□□□□□ -0.77
CPNE3-206ENST00000523469 BCO2Q9BYV7 579 aa10.24□□□□□ -0.77
CPNE3-206ENST00000523469 PPME1Q9Y570 386 aa10.24□□□□□ -0.77
CPNE3-206ENST00000523469 RGS22Q8NE09 1264 aa10.23□□□□□ -0.77
CPNE3-206ENST00000523469 GLIS3Q8NEA6 775 aa10.23□□□□□ -0.77
CPNE3-206ENST00000523469 SOX13Q9UN79 622 aa10.23□□□□□ -0.77
CPNE3-206ENST00000523469 A0A096LPE4 126 aa10.22□□□□□ -0.77
CPNE3-206ENST00000523469 A0A1W2PPZ6 126 aa10.22□□□□□ -0.77
CPNE3-206ENST00000523469 METTL12A8MUP2 240 aa10.22□□□□□ -0.77
CPNE3-206ENST00000523469 GNA15P30679 374 aa10.22□□□□□ -0.77
CPNE3-206ENST00000523469 GRIA4P48058 902 aa10.22□□□□□ -0.77
CPNE3-206ENST00000523469 CABP4P57796 275 aa10.22□□□□□ -0.77
CPNE3-206ENST00000523469 ZNF326Q5BKZ1 582 aaKnown RBP10.22□□□□□ -0.77
CPNE3-206ENST00000523469 DTWD1Q8N5C7 304 aa10.22□□□□□ -0.77
CPNE3-206ENST00000523469 GIPC2Q8TF65 315 aa10.22□□□□□ -0.77
CPNE3-206ENST00000523469 SRCIN1Q9C0H9 1055 aa10.22□□□□□ -0.77
CPNE3-206ENST00000523469 ABCB6Q9NP58 842 aa10.22□□□□□ -0.77
CPNE3-206ENST00000523469 SH2B1Q9NRF2 756 aaPredicted RBP10.22□□□□□ -0.77
CPNE3-206ENST00000523469 TMEM238LA0A1B0GVL6 79 aa10.21□□□□□ -0.77
CPNE3-206ENST00000523469 EPHA1P21709 976 aa10.21□□□□□ -0.77
CPNE3-206ENST00000523469 RAC1P63000 192 aa10.21□□□□□ -0.77
CPNE3-206ENST00000523469 TAGLNQ01995 201 aaKnown RBP10.21□□□□□ -0.77
CPNE3-206ENST00000523469 NXPE4Q6UWF7 544 aa10.21□□□□□ -0.77
CPNE3-206ENST00000523469 SRA1Q9HD15 236 aaKnown RBP10.21□□□□□ -0.77
CPNE3-206ENST00000523469 PARP2Q9UGN5 583 aa10.21□□□□□ -0.77
CPNE3-206ENST00000523469 A0A0A0MRY4 1105 aa10.2□□□□□ -0.78
CPNE3-206ENST00000523469 ITPKAP23677 461 aa10.2□□□□□ -0.78
CPNE3-206ENST00000523469 XPCQ01831 940 aaPredicted RBP10.2□□□□□ -0.78
CPNE3-206ENST00000523469 PTPN12Q05209 780 aaKnown RBP10.2□□□□□ -0.78
CPNE3-206ENST00000523469 TRIM28Q13263 835 aaKnown RBP10.2□□□□□ -0.78
CPNE3-206ENST00000523469 SPRED3Q2MJR0 410 aa10.2□□□□□ -0.78
CPNE3-206ENST00000523469 PRRT3Q5FWE3 981 aa10.2□□□□□ -0.78
CPNE3-206ENST00000523469 MAP4K3Q8IVH8 894 aa10.2□□□□□ -0.78
CPNE3-206ENST00000523469 OSBPL7Q9BZF2 842 aa10.2□□□□□ -0.78
CPNE3-206ENST00000523469 H3BRJ5 948 aa10.19□□□□□ -0.78
CPNE3-206ENST00000523469 XRCC5P13010 732 aaKnown RBP10.19□□□□□ -0.78
CPNE3-206ENST00000523469 FAM117BQ6P1L5 589 aa10.19□□□□□ -0.78
CPNE3-206ENST00000523469 VN1R5Q7Z5H4 357 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms