RNA–Protein interactions for RNA: ENST00000523359.1

SKP1-211, Transcript of S-phase kinase associated protein 1, humanhuman

TSL 5

Gene SKP1, Length 748 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1-211ENST00000523359 J3QW42 95 aa8.46□□□□□ -1.06
SKP1-211ENST00000523359 P4HBP07237 508 aaKnown RBP8.46□□□□□ -1.06
SKP1-211ENST00000523359 MAPK8P45983 427 aa8.46□□□□□ -1.06
SKP1-211ENST00000523359 NRLP54845 237 aa8.46□□□□□ -1.06
SKP1-211ENST00000523359 FMR1Q06787 632 aaKnown RBP eCLIP8.46□□□□□ -1.06
SKP1-211ENST00000523359 ORC1Q13415 861 aa8.46□□□□□ -1.06
SKP1-211ENST00000523359 NLRP13Q86W25 1043 aa8.46□□□□□ -1.06
SKP1-211ENST00000523359 NSUN5Q96P11 429 aaKnown RBP8.46□□□□□ -1.06
SKP1-211ENST00000523359 ELP3Q9H9T3 547 aa8.46□□□□□ -1.06
SKP1-211ENST00000523359 FOXD3Q9UJU5 478 aaPredicted RBP8.46□□□□□ -1.06
SKP1-211ENST00000523359 MMP20O60882 483 aa8.45□□□□□ -1.06
SKP1-211ENST00000523359 TNFRSF21O75509 655 aa8.45□□□□□ -1.06
SKP1-211ENST00000523359 PSAPP07602 524 aa8.45□□□□□ -1.06
SKP1-211ENST00000523359 BCL2L13Q9BXK5 485 aa8.45□□□□□ -1.06
SKP1-211ENST00000523359 FOXD4L6Q3SYB3 417 aaPredicted RBP8.44□□□□□ -1.06
SKP1-211ENST00000523359 EAPPQ56P03 285 aaPredicted RBP8.44□□□□□ -1.06
SKP1-211ENST00000523359 PRSS36Q5K4E3 855 aa8.44□□□□□ -1.06
SKP1-211ENST00000523359 FOXD4L3Q6VB84 417 aaPredicted RBP8.44□□□□□ -1.06
SKP1-211ENST00000523359 FBXO11Q86XK2 927 aa8.44□□□□□ -1.06
SKP1-211ENST00000523359 DTWD1Q8N5C7 304 aa8.44□□□□□ -1.06
SKP1-211ENST00000523359 TTC9Q92623 222 aa8.44□□□□□ -1.06
SKP1-211ENST00000523359 ABI2Q9NYB9 513 aaPredicted RBP8.44□□□□□ -1.06
SKP1-211ENST00000523359 LOC102724428A0A0B4J2F2 783 aa8.43□□□□□ -1.06
SKP1-211ENST00000523359 SIK1P57059 783 aa8.43□□□□□ -1.06
SKP1-211ENST00000523359 TAGLNQ01995 201 aaKnown RBP8.43□□□□□ -1.06
SKP1-211ENST00000523359 COL19A1Q14993 1142 aa8.43□□□□□ -1.06
SKP1-211ENST00000523359 SNX29Q8TEQ0 813 aa8.43□□□□□ -1.06
SKP1-211ENST00000523359 GIPC2Q8TF65 315 aa8.43□□□□□ -1.06
SKP1-211ENST00000523359 PLD4Q96BZ4 506 aa8.43□□□□□ -1.06
SKP1-211ENST00000523359 CSRNP1Q96S65 589 aa8.43□□□□□ -1.06
SKP1-211ENST00000523359 CNTN3Q9P232 1028 aa8.43□□□□□ -1.06
SKP1-211ENST00000523359 AMOTL2Q9Y2J4 779 aa8.43□□□□□ -1.06
SKP1-211ENST00000523359 PNMA6FA0A0J9YX94 578 aa8.42□□□□□ -1.06
SKP1-211ENST00000523359 EIF1AYO14602 144 aaKnown RBP8.42□□□□□ -1.06
SKP1-211ENST00000523359 PHACTR2O75167 634 aa8.42□□□□□ -1.06
SKP1-211ENST00000523359 NEFLP07196 543 aa8.42□□□□□ -1.06
SKP1-211ENST00000523359 TTC39BQ5VTQ0 682 aaPredicted RBP8.42□□□□□ -1.06
SKP1-211ENST00000523359 GDF6Q6KF10 455 aaPredicted RBP8.42□□□□□ -1.06
SKP1-211ENST00000523359 FBXO33Q7Z6M2 555 aa8.42□□□□□ -1.06
SKP1-211ENST00000523359 C1orf127Q8N9H9 656 aa8.42□□□□□ -1.06
SKP1-211ENST00000523359 TP53INP1Q96A56 240 aa8.42□□□□□ -1.06
SKP1-211ENST00000523359 ZNF428Q96B54 188 aa8.42□□□□□ -1.06
SKP1-211ENST00000523359 WWC3Q9ULE0 1092 aa8.42□□□□□ -1.06
SKP1-211ENST00000523359 SCO2A0A1W2PP80 73 aa8.41□□□□□ -1.06
SKP1-211ENST00000523359 DEAF1O75398 565 aaPredicted RBP8.41□□□□□ -1.06
SKP1-211ENST00000523359 GHRHP01286 108 aa8.41□□□□□ -1.06
SKP1-211ENST00000523359 CYP2E1P05181 493 aaPredicted RBP8.41□□□□□ -1.06
SKP1-211ENST00000523359 USPL1Q5W0Q7 1092 aa8.41□□□□□ -1.06
SKP1-211ENST00000523359 SETDB2Q96T68 719 aa8.41□□□□□ -1.06
SKP1-211ENST00000523359 ZFYVE28Q9HCC9 887 aa8.41□□□□□ -1.06
SKP1-211ENST00000523359 CPNE3O75131 537 aaKnown RBP8.4□□□□□ -1.06
SKP1-211ENST00000523359 LDHBP07195 334 aaKnown RBP8.4□□□□□ -1.06
SKP1-211ENST00000523359 H2AFB1P0C5Y9 115 aa8.4□□□□□ -1.06
SKP1-211ENST00000523359 H2AFB2P0C5Z0 115 aa8.4□□□□□ -1.06
SKP1-211ENST00000523359 IREB2P48200 963 aaKnown RBP8.4□□□□□ -1.06
SKP1-211ENST00000523359 ENOX2Q16206 610 aaKnown RBP8.4□□□□□ -1.06
SKP1-211ENST00000523359 WFDC12Q8WWY7 111 aa8.4□□□□□ -1.06
SKP1-211ENST00000523359 CHRDQ9H2X0 955 aa8.4□□□□□ -1.06
SKP1-211ENST00000523359 RBM47A0AV96 593 aaKnown RBP8.39□□□□□ -1.07
SKP1-211ENST00000523359 EREGO14944 169 aa8.39□□□□□ -1.07
SKP1-211ENST00000523359 ZNF16P17020 682 aaPredicted RBP8.39□□□□□ -1.07
SKP1-211ENST00000523359 SOX18P35713 384 aa8.39□□□□□ -1.07
SKP1-211ENST00000523359 OR13H1Q8NG92 308 aa8.39□□□□□ -1.07
SKP1-211ENST00000523359 SSBP4Q9BWG4 385 aaPredicted RBP8.39□□□□□ -1.07
SKP1-211ENST00000523359 RBSNQ9H1K0 784 aa8.39□□□□□ -1.07
SKP1-211ENST00000523359 DNAJC25Q9H1X3 360 aa8.39□□□□□ -1.07
SKP1-211ENST00000523359 KANSL3Q9P2N6 904 aa8.39□□□□□ -1.07
SKP1-211ENST00000523359 POLR3DP05423 398 aaPredicted RBP8.38□□□□□ -1.07
SKP1-211ENST00000523359 HOXD8P13378 290 aaPredicted RBP8.38□□□□□ -1.07
SKP1-211ENST00000523359 CES1P23141 567 aa8.38□□□□□ -1.07
SKP1-211ENST00000523359 NOS3P29474 1203 aa8.38□□□□□ -1.07
SKP1-211ENST00000523359 RBM25P49756 843 aaKnown RBP8.38□□□□□ -1.07
SKP1-211ENST00000523359 ATP2B2Q01814 1243 aa8.38□□□□□ -1.07
SKP1-211ENST00000523359 IGF2-ASQ6U949 168 aa8.38□□□□□ -1.07
SKP1-211ENST00000523359 IL22RA1Q8N6P7 574 aa8.38□□□□□ -1.07
SKP1-211ENST00000523359 TRIM33Q9UPN9 1127 aa8.38□□□□□ -1.07
SKP1-211ENST00000523359 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.38□□□□□ -1.07
SKP1-211ENST00000523359 ZNF326Q5BKZ1 582 aaKnown RBP8.37□□□□□ -1.07
SKP1-211ENST00000523359 DLL1O00548 723 aa8.36□□□□□ -1.07
SKP1-211ENST00000523359 PRPF40AO75400 957 aaKnown RBP8.36□□□□□ -1.07
SKP1-211ENST00000523359 COL13A1Q5TAT6 717 aaPredicted RBP8.36□□□□□ -1.07
SKP1-211ENST00000523359 PMEPA1Q969W9 287 aa8.36□□□□□ -1.07
SKP1-211ENST00000523359 MEGF10Q96KG7 1140 aa8.36□□□□□ -1.07
SKP1-211ENST00000523359 RNF19AQ9NV58 838 aa8.36□□□□□ -1.07
SKP1-211ENST00000523359 ALG1LQ6GMV1 187 aa8.35□□□□□ -1.07
SKP1-211ENST00000523359 CCDC74AQ96AQ1 378 aa8.35□□□□□ -1.07
SKP1-211ENST00000523359 DUSP9Q99956 384 aaKnown RBP8.35□□□□□ -1.07
SKP1-211ENST00000523359 UNCXA6NJT0 531 aa8.34□□□□□ -1.07
SKP1-211ENST00000523359 ALX3O95076 343 aa8.34□□□□□ -1.07
SKP1-211ENST00000523359 ATP11AP98196 1134 aa8.34□□□□□ -1.07
SKP1-211ENST00000523359 PI16Q6UXB8 463 aa8.34□□□□□ -1.07
SKP1-211ENST00000523359 NPHS2Q9NP85 383 aa8.34□□□□□ -1.07
SKP1-211ENST00000523359 SALL4Q9UJQ4 1053 aa8.34□□□□□ -1.07
SKP1-211ENST00000523359 HYAL2Q12891 473 aa8.33□□□□□ -1.08
SKP1-211ENST00000523359 SETDB1Q15047 1291 aa8.33□□□□□ -1.08
SKP1-211ENST00000523359 GALNT12Q8IXK2 581 aa8.33□□□□□ -1.08
SKP1-211ENST00000523359 EPS8L3Q8TE67 593 aaKnown RBP8.33□□□□□ -1.08
SKP1-211ENST00000523359 FBF1Q8TES7 1133 aa8.33□□□□□ -1.08
SKP1-211ENST00000523359 AKTIPQ9H8T0 292 aa8.33□□□□□ -1.08
SKP1-211ENST00000523359 PARP2Q9UGN5 583 aa8.33□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms