RNA–Protein interactions for RNA: ENST00000523062.1

CSMD1-211, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 3

Gene CSMD1, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-211ENST00000523062 USP46P62068 366 aa8.51□□□□□ -1.05
CSMD1-211ENST00000523062 PROSER3Q2NL68 480 aa8.51□□□□□ -1.05
CSMD1-211ENST00000523062 BEND3Q5T5X7 828 aa8.51□□□□□ -1.05
CSMD1-211ENST00000523062 KSR2Q6VAB6 950 aa8.51□□□□□ -1.05
CSMD1-211ENST00000523062 PI4KAP1Q8N8J0 262 aa8.51□□□□□ -1.05
CSMD1-211ENST00000523062 DDRGK1Q96HY6 314 aa8.51□□□□□ -1.05
CSMD1-211ENST00000523062 IPO9Q96P70 1041 aaKnown RBP8.51□□□□□ -1.05
CSMD1-211ENST00000523062 HDAC5Q9UQL6 1122 aa8.51□□□□□ -1.05
CSMD1-211ENST00000523062 TNS2Q63HR2 1409 aa8.51□□□□□ -1.05
CSMD1-211ENST00000523062 GLI3P10071 1580 aa8.51□□□□□ -1.05
CSMD1-211ENST00000523062 PAPPAQ13219 1627 aa8.51□□□□□ -1.05
CSMD1-211ENST00000523062 IBTKQ9P2D0 1353 aaPredicted RBP8.5□□□□□ -1.05
CSMD1-211ENST00000523062 NNTQ13423 1086 aa8.5□□□□□ -1.05
CSMD1-211ENST00000523062 BMP2KLQ5H9B9 411 aa8.5□□□□□ -1.05
CSMD1-211ENST00000523062 MPNDQ8N594 471 aa8.5□□□□□ -1.05
CSMD1-211ENST00000523062 DDX54Q8TDD1 881 aaKnown RBP8.5□□□□□ -1.05
CSMD1-211ENST00000523062 NUDT12Q9BQG2 462 aa8.5□□□□□ -1.05
CSMD1-211ENST00000523062 USP44Q9H0E7 712 aa8.5□□□□□ -1.05
CSMD1-211ENST00000523062 UPF2Q9HAU5 1272 aaKnown RBP8.5□□□□□ -1.05
CSMD1-211ENST00000523062 MAP3K2Q9Y2U5 619 aa8.5□□□□□ -1.05
CSMD1-211ENST00000523062 LRRFIP2Q9Y608 721 aaKnown RBP8.5□□□□□ -1.05
CSMD1-211ENST00000523062 KCPQ6ZWJ8 1503 aa8.49□□□□□ -1.05
CSMD1-211ENST00000523062 UBR2Q8IWV8 1755 aa8.49□□□□□ -1.05
CSMD1-211ENST00000523062 HOXA2O43364 376 aa8.49□□□□□ -1.05
CSMD1-211ENST00000523062 ATP8B2P98198 1209 aa8.49□□□□□ -1.05
CSMD1-211ENST00000523062 ERICH6Q7L0X2 663 aa8.49□□□□□ -1.05
CSMD1-211ENST00000523062 SYMPKQ92797 1274 aaKnown RBP8.49□□□□□ -1.05
CSMD1-211ENST00000523062 CDCA7Q9BWT1 371 aaPredicted RBP8.49□□□□□ -1.05
CSMD1-211ENST00000523062 USP35Q9P2H5 1018 aa8.49□□□□□ -1.05
CSMD1-211ENST00000523062 LRP6O75581 1613 aa8.49□□□□□ -1.05
CSMD1-211ENST00000523062 WNK3Q9BYP7 1800 aa8.49□□□□□ -1.05
CSMD1-211ENST00000523062 NRAPQ86VF7 1730 aa8.49□□□□□ -1.05
CSMD1-211ENST00000523062 ADH1CP00326 375 aa8.48□□□□□ -1.05
CSMD1-211ENST00000523062 TIMP2P16035 220 aa8.48□□□□□ -1.05
CSMD1-211ENST00000523062 WDR4P57081 412 aaKnown RBP8.48□□□□□ -1.05
CSMD1-211ENST00000523062 PIP4K2BP78356 416 aa8.48□□□□□ -1.05
CSMD1-211ENST00000523062 LINS1Q8NG48 757 aa8.48□□□□□ -1.05
CSMD1-211ENST00000523062 XAGE3Q8WTP9 111 aa8.48□□□□□ -1.05
CSMD1-211ENST00000523062 KLF16Q9BXK1 252 aaPredicted RBP8.48□□□□□ -1.05
CSMD1-211ENST00000523062 TMOD3Q9NYL9 352 aa8.48□□□□□ -1.05
CSMD1-211ENST00000523062 THRAP3Q9Y2W1 955 aaKnown RBP8.48□□□□□ -1.05
CSMD1-211ENST00000523062 NOP58Q9Y2X3 529 aaKnown RBP8.48□□□□□ -1.05
CSMD1-211ENST00000523062 TOGARAM1Q9Y4F4 1720 aa8.48□□□□□ -1.05
CSMD1-211ENST00000523062 PNMA6EA0A0J9YXQ4 647 aa8.47□□□□□ -1.05
CSMD1-211ENST00000523062 UBAP1LF5GYI3 381 aa8.47□□□□□ -1.05
CSMD1-211ENST00000523062 ADAMTS2O95450 1211 aa8.47□□□□□ -1.05
CSMD1-211ENST00000523062 MYL6BP14649 208 aa8.47□□□□□ -1.05
CSMD1-211ENST00000523062 GUCA2AQ02747 115 aa8.47□□□□□ -1.05
CSMD1-211ENST00000523062 NEXNQ0ZGT2 675 aa8.47□□□□□ -1.05
CSMD1-211ENST00000523062 AIMP1Q12904 312 aaKnown RBP8.47□□□□□ -1.05
CSMD1-211ENST00000523062 KANK3Q6NY19 840 aa8.47□□□□□ -1.05
CSMD1-211ENST00000523062 LRP10Q7Z4F1 713 aa8.47□□□□□ -1.05
CSMD1-211ENST00000523062 RIC3Q7Z5B4 369 aa8.47□□□□□ -1.05
CSMD1-211ENST00000523062 PLEKHM2Q8IWE5 1019 aa8.47□□□□□ -1.05
CSMD1-211ENST00000523062 SSH3Q8TE77 659 aa8.47□□□□□ -1.05
CSMD1-211ENST00000523062 C9orf78Q9NZ63 289 aaPredicted RBP8.47□□□□□ -1.05
CSMD1-211ENST00000523062 USP16Q9Y5T5 823 aa8.47□□□□□ -1.05
CSMD1-211ENST00000523062 TLL2Q9Y6L7 1015 aa8.47□□□□□ -1.05
CSMD1-211ENST00000523062 SPATA31A1Q5TZJ5 1347 aa8.47□□□□□ -1.05
CSMD1-211ENST00000523062 NWD2Q9ULI1 1742 aa8.46□□□□□ -1.05
CSMD1-211ENST00000523062 SLIT2O94813 1529 aa8.46□□□□□ -1.05
CSMD1-211ENST00000523062 EXOC5O00471 708 aa8.46□□□□□ -1.06
CSMD1-211ENST00000523062 EIF5BO60841 1220 aaKnown RBP8.46□□□□□ -1.06
CSMD1-211ENST00000523062 NBPF7P0C2Y1 421 aaPredicted RBP8.46□□□□□ -1.06
CSMD1-211ENST00000523062 VARSP26640 1264 aaKnown RBP8.46□□□□□ -1.06
CSMD1-211ENST00000523062 IRS1P35568 1242 aa8.46□□□□□ -1.06
CSMD1-211ENST00000523062 MTX1Q13505 466 aa8.46□□□□□ -1.06
CSMD1-211ENST00000523062 HSP90AB4PQ58FF6 505 aa8.46□□□□□ -1.06
CSMD1-211ENST00000523062 TTC22Q5TAA0 569 aa8.46□□□□□ -1.06
CSMD1-211ENST00000523062 COPS6Q7L5N1 327 aa8.46□□□□□ -1.06
CSMD1-211ENST00000523062 CNTNAP3BQ96NU0 1288 aa8.46□□□□□ -1.06
CSMD1-211ENST00000523062 METTL22Q9BUU2 404 aaPredicted RBP8.46□□□□□ -1.06
CSMD1-211ENST00000523062 CNTNAP3Q9BZ76 1288 aa8.46□□□□□ -1.06
CSMD1-211ENST00000523062 LRRCC1Q9C099 1032 aa8.46□□□□□ -1.06
CSMD1-211ENST00000523062 EXOC6BQ9Y2D4 811 aa8.46□□□□□ -1.06
CSMD1-211ENST00000523062 UTYO14607 1347 aa8.46□□□□□ -1.06
CSMD1-211ENST00000523062 JCADQ9P266 1359 aa8.46□□□□□ -1.06
CSMD1-211ENST00000523062 NUTM2BA6NNL0 878 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-211ENST00000523062 NUTM2EB1AL46 878 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-211ENST00000523062 APBB1O00213 710 aa8.45□□□□□ -1.06
CSMD1-211ENST00000523062 GRM8O00222 908 aa8.45□□□□□ -1.06
CSMD1-211ENST00000523062 RAB11FIP3O75154 756 aa8.45□□□□□ -1.06
CSMD1-211ENST00000523062 CDC45O75419 566 aa8.45□□□□□ -1.06
CSMD1-211ENST00000523062 SMYD5Q6GMV2 418 aa8.45□□□□□ -1.06
CSMD1-211ENST00000523062 PPP1R42Q7Z4L9 355 aa8.45□□□□□ -1.06
CSMD1-211ENST00000523062 RETREG3Q86VR2 466 aa8.45□□□□□ -1.06
CSMD1-211ENST00000523062 NUTM2AQ8IVF1 878 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-211ENST00000523062 VSIG10Q8N0Z9 540 aa8.45□□□□□ -1.06
CSMD1-211ENST00000523062 PLBD2Q8NHP8 589 aa8.45□□□□□ -1.06
CSMD1-211ENST00000523062 TBC1D32Q96NH3 1257 aa8.45□□□□□ -1.06
CSMD1-211ENST00000523062 TEX13AQ9BXU3 409 aaPredicted RBP8.45□□□□□ -1.06
CSMD1-211ENST00000523062 SPATA31A5Q5VU36 1347 aa8.45□□□□□ -1.06
CSMD1-211ENST00000523062 SPATA31A7Q8IWB4 1347 aa8.45□□□□□ -1.06
CSMD1-211ENST00000523062 BCL9O00512 1426 aa8.45□□□□□ -1.06
CSMD1-211ENST00000523062 NEURL1BA8MQ27 555 aa8.44□□□□□ -1.06
CSMD1-211ENST00000523062 SRGAP3O43295 1099 aa8.44□□□□□ -1.06
CSMD1-211ENST00000523062 SMARCA5O60264 1052 aaPredicted RBP8.44□□□□□ -1.06
CSMD1-211ENST00000523062 PTCD1O75127 700 aaKnown RBP8.44□□□□□ -1.06
CSMD1-211ENST00000523062 IGKV5-2P06315 115 aa8.44□□□□□ -1.06
CSMD1-211ENST00000523062 GSPT1P15170 499 aaKnown RBP8.44□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms