RNA–Protein interactions for RNA: ENST00000522802.5

VPS13B-211, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 3

Gene VPS13B, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-211ENST00000522802 NMRK2Q9NPI5 230 aa9.11□□□□□ -0.95
VPS13B-211ENST00000522802 PCDHB11Q9Y5F2 797 aa9.11□□□□□ -0.95
VPS13B-211ENST00000522802 SBNO2Q9Y2G9 1366 aa9.11□□□□□ -0.95
VPS13B-211ENST00000522802 ITGB4P16144 1822 aa9.1□□□□□ -0.95
VPS13B-211ENST00000522802 EVC2Q86UK5 1308 aa9.1□□□□□ -0.95
VPS13B-211ENST00000522802 LZTS3O60299 673 aaPredicted RBP9.1□□□□□ -0.95
VPS13B-211ENST00000522802 LILRA1O75019 489 aa9.1□□□□□ -0.95
VPS13B-211ENST00000522802 TOMM70O94826 608 aa9.1□□□□□ -0.95
VPS13B-211ENST00000522802 WDR4P57081 412 aaKnown RBP9.1□□□□□ -0.95
VPS13B-211ENST00000522802 SMIM5Q71RC9 77 aa9.1□□□□□ -0.95
VPS13B-211ENST00000522802 SUGP2Q8IX01 1082 aaKnown RBP eCLIP9.1□□□□□ -0.95
VPS13B-211ENST00000522802 JMYQ8N9B5 988 aa9.1□□□□□ -0.95
VPS13B-211ENST00000522802 KLRG1Q96E93 195 aa9.1□□□□□ -0.95
VPS13B-211ENST00000522802 PGPEP1Q9NXJ5 209 aa9.1□□□□□ -0.95
VPS13B-211ENST00000522802 DOLKQ9UPQ8 538 aa9.1□□□□□ -0.95
VPS13B-211ENST00000522802 USP47Q96K76 1375 aa9.1□□□□□ -0.95
VPS13B-211ENST00000522802 ZIC2O95409 532 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-211ENST00000522802 ERVK-9P63128 1117 aa9.09□□□□□ -0.95
VPS13B-211ENST00000522802 PLEKHM2Q8IWE5 1019 aa9.09□□□□□ -0.95
VPS13B-211ENST00000522802 CCDC82Q8N4S0 544 aa9.09□□□□□ -0.95
VPS13B-211ENST00000522802 MAFBQ9Y5Q3 323 aaPredicted RBP9.09□□□□□ -0.95
VPS13B-211ENST00000522802 MAP2P11137 1827 aaKnown RBP9.09□□□□□ -0.95
VPS13B-211ENST00000522802 TNRC6CQ9HCJ0 1690 aaKnown RBP9.09□□□□□ -0.95
VPS13B-211ENST00000522802 USP17L5A8MUK1 530 aa9.08□□□□□ -0.96
VPS13B-211ENST00000522802 ADD1P35611 737 aaKnown RBP9.08□□□□□ -0.96
VPS13B-211ENST00000522802 SMCPP49901 116 aaPredicted RBP9.08□□□□□ -0.96
VPS13B-211ENST00000522802 NFX1Q12986 1120 aaKnown RBP9.08□□□□□ -0.96
VPS13B-211ENST00000522802 USP4Q13107 963 aa9.08□□□□□ -0.96
VPS13B-211ENST00000522802 Q6ZVU0 165 aa9.08□□□□□ -0.96
VPS13B-211ENST00000522802 CCDC97Q96F63 343 aaPredicted RBP9.08□□□□□ -0.96
VPS13B-211ENST00000522802 LTV1Q96GA3 475 aaPredicted RBP9.08□□□□□ -0.96
VPS13B-211ENST00000522802 ZFAND3Q9H8U3 227 aa9.08□□□□□ -0.96
VPS13B-211ENST00000522802 PALLDQ8WX93 1383 aa9.08□□□□□ -0.96
VPS13B-211ENST00000522802 KCPQ6ZWJ8 1503 aa9.07□□□□□ -0.96
VPS13B-211ENST00000522802 CAPN5O15484 640 aaPredicted RBP9.07□□□□□ -0.96
VPS13B-211ENST00000522802 SCTRP47872 440 aa9.07□□□□□ -0.96
VPS13B-211ENST00000522802 CTC1Q2NKJ3 1217 aa9.07□□□□□ -0.96
VPS13B-211ENST00000522802 CC2D2BQ6DHV5 1058 aa9.07□□□□□ -0.96
VPS13B-211ENST00000522802 ARFGEF1Q9Y6D6 1849 aa9.07□□□□□ -0.96
VPS13B-211ENST00000522802 USP17L3A6NCW0 530 aa9.06□□□□□ -0.96
VPS13B-211ENST00000522802 USP17L4A6NCW7 530 aa9.06□□□□□ -0.96
VPS13B-211ENST00000522802 USP17L2Q6R6M4 530 aa9.06□□□□□ -0.96
VPS13B-211ENST00000522802 USP17L1Q7RTZ2 530 aa9.06□□□□□ -0.96
VPS13B-211ENST00000522802 DEPDC4Q8N2C3 294 aa9.06□□□□□ -0.96
VPS13B-211ENST00000522802 CYLDQ9NQC7 956 aa9.06□□□□□ -0.96
VPS13B-211ENST00000522802 EDC4Q6P2E9 1401 aaKnown RBP9.05□□□□□ -0.96
VPS13B-211ENST00000522802 C10orf71Q711Q0 1435 aa9.05□□□□□ -0.96
VPS13B-211ENST00000522802 LMOD1P29536 600 aaPredicted RBP9.05□□□□□ -0.96
VPS13B-211ENST00000522802 NCOA4Q13772 614 aa9.05□□□□□ -0.96
VPS13B-211ENST00000522802 OXLD1Q5BKU9 147 aa9.05□□□□□ -0.96
VPS13B-211ENST00000522802 C4AP0C0L4 1744 aa9.05□□□□□ -0.96
VPS13B-211ENST00000522802 A0A1W2PP64 1363 aa9.04□□□□□ -0.96
VPS13B-211ENST00000522802 CBLBQ13191 982 aa9.04□□□□□ -0.96
VPS13B-211ENST00000522802 EML3Q32P44 896 aa9.04□□□□□ -0.96
VPS13B-211ENST00000522802 KDF1Q8NAX2 398 aaPredicted RBP9.04□□□□□ -0.96
VPS13B-211ENST00000522802 FLAD1Q8NFF5 587 aa9.04□□□□□ -0.96
VPS13B-211ENST00000522802 ZCRB1Q8TBF4 217 aaKnown RBP9.04□□□□□ -0.96
VPS13B-211ENST00000522802 IP6K1Q92551 441 aa9.04□□□□□ -0.96
VPS13B-211ENST00000522802 OSBPL3Q9H4L5 887 aa9.04□□□□□ -0.96
VPS13B-211ENST00000522802 NSD3Q9BZ95 1437 aa9.04□□□□□ -0.96
VPS13B-211ENST00000522802 WIPF1O43516 503 aa9.03□□□□□ -0.96
VPS13B-211ENST00000522802 MYCP01106 439 aaPredicted RBP9.03□□□□□ -0.96
VPS13B-211ENST00000522802 HSPA1AP0DMV8 641 aaKnown RBP9.03□□□□□ -0.96
VPS13B-211ENST00000522802 HSPA1BP0DMV9 641 aaKnown RBP9.03□□□□□ -0.96
VPS13B-211ENST00000522802 USHBP1Q8N6Y0 703 aa9.03□□□□□ -0.96
VPS13B-211ENST00000522802 NOD1Q9Y239 953 aa9.03□□□□□ -0.96
VPS13B-211ENST00000522802 BCS1LQ9Y276 419 aa9.03□□□□□ -0.96
VPS13B-211ENST00000522802 MAP3K19Q56UN5 1328 aa9.03□□□□□ -0.96
VPS13B-211ENST00000522802 TIAM2Q8IVF5 1701 aa9.02□□□□□ -0.96
VPS13B-211ENST00000522802 SBF1O95248 1867 aa9.02□□□□□ -0.96
VPS13B-211ENST00000522802 PLEKHG2Q9H7P9 1386 aa9.02□□□□□ -0.97
VPS13B-211ENST00000522802 HOXC9P31274 260 aa9.02□□□□□ -0.97
VPS13B-211ENST00000522802 FSTL1Q12841 308 aa9.02□□□□□ -0.97
VPS13B-211ENST00000522802 LCE2CQ5TA81 110 aa9.02□□□□□ -0.97
VPS13B-211ENST00000522802 MEIOBQ8N635 442 aa9.02□□□□□ -0.97
VPS13B-211ENST00000522802 LINC00116Q8NCU8 138 aa9.02□□□□□ -0.97
VPS13B-211ENST00000522802 STK17AQ9UEE5 414 aa9.02□□□□□ -0.97
VPS13B-211ENST00000522802 MKRN1Q9UHC7 482 aaKnown RBP9.02□□□□□ -0.97
VPS13B-211ENST00000522802 PCDHGA11Q9Y5H2 935 aa9.02□□□□□ -0.97
VPS13B-211ENST00000522802 ROCK2O75116 1388 aaKnown RBP9.01□□□□□ -0.97
VPS13B-211ENST00000522802 A0A0G2JLW4 131 aa9.01□□□□□ -0.97
VPS13B-211ENST00000522802 ADH1AP07327 375 aa9.01□□□□□ -0.97
VPS13B-211ENST00000522802 MMP10P09238 476 aa9.01□□□□□ -0.97
VPS13B-211ENST00000522802 RFX1P22670 979 aa9.01□□□□□ -0.97
VPS13B-211ENST00000522802 FBLN1P23142 703 aa9.01□□□□□ -0.97
VPS13B-211ENST00000522802 COL5A3P25940 1745 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-211ENST00000522802 C9orf131Q5VYM1 1079 aa9.01□□□□□ -0.97
VPS13B-211ENST00000522802 MPRIPQ6WCQ1 1025 aa9.01□□□□□ -0.97
VPS13B-211ENST00000522802 ARHGAP27Q6ZUM4 889 aa9.01□□□□□ -0.97
VPS13B-211ENST00000522802 C16orf71Q8IYS4 520 aaPredicted RBP9.01□□□□□ -0.97
VPS13B-211ENST00000522802 ATP5J2-PTCD1G3V325 749 aa9□□□□□ -0.97
VPS13B-211ENST00000522802 SNRPBP14678 240 aaKnown RBP9□□□□□ -0.97
VPS13B-211ENST00000522802 SSFA2P28290 1259 aa9□□□□□ -0.97
VPS13B-211ENST00000522802 VRTNQ9H8Y1 702 aa9□□□□□ -0.97
VPS13B-211ENST00000522802 PCDH11XQ9BZA7 1347 aa9□□□□□ -0.97
VPS13B-211ENST00000522802 PCDH11YQ9BZA8 1340 aa9□□□□□ -0.97
VPS13B-211ENST00000522802 RTL1A6NKG5 1358 aa8.99□□□□□ -0.97
VPS13B-211ENST00000522802 ZBTB7BO15156 539 aaPredicted RBP8.99□□□□□ -0.97
VPS13B-211ENST00000522802 DPEP1P16444 411 aa8.99□□□□□ -0.97
VPS13B-211ENST00000522802 INSM1Q01101 510 aaPredicted RBP8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms