RNA–Protein interactions for RNA: ENST00000522658.5

PABPC1-220, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 736 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-220ENST00000522658 MMP10P09238 476 aa8.57□□□□□ -1.04
PABPC1-220ENST00000522658 KRT76Q01546 638 aa8.57□□□□□ -1.04
PABPC1-220ENST00000522658 PTSQ03393 145 aa8.57□□□□□ -1.04
PABPC1-220ENST00000522658 IFNL2Q8IZJ0 200 aa8.57□□□□□ -1.04
PABPC1-220ENST00000522658 GPR161Q8N6U8 529 aaKnown RBP8.57□□□□□ -1.04
PABPC1-220ENST00000522658 SLC10A4Q96EP9 437 aa8.57□□□□□ -1.04
PABPC1-220ENST00000522658 POLR3GLQ9BT43 218 aa8.57□□□□□ -1.04
PABPC1-220ENST00000522658 FAM117AQ9C073 453 aa8.57□□□□□ -1.04
PABPC1-220ENST00000522658 KDM4CQ9H3R0 1056 aa8.57□□□□□ -1.04
PABPC1-220ENST00000522658 PARP3Q9Y6F1 533 aa8.57□□□□□ -1.04
PABPC1-220ENST00000522658 PKD1L3Q7Z443 1732 aa8.57□□□□□ -1.04
PABPC1-220ENST00000522658 CICQ96RK0 1608 aaPredicted RBP8.56□□□□□ -1.04
PABPC1-220ENST00000522658 CYP27B1O15528 508 aa8.56□□□□□ -1.04
PABPC1-220ENST00000522658 INTS6LQ5JSJ4 861 aaKnown RBP8.56□□□□□ -1.04
PABPC1-220ENST00000522658 PIGBQ92521 554 aa8.56□□□□□ -1.04
PABPC1-220ENST00000522658 TESK2Q96S53 571 aa8.56□□□□□ -1.04
PABPC1-220ENST00000522658 GPSM3Q9Y4H4 160 aa8.56□□□□□ -1.04
PABPC1-220ENST00000522658 TOGARAM1Q9Y4F4 1720 aa8.56□□□□□ -1.04
PABPC1-220ENST00000522658 PLEKHG2Q9H7P9 1386 aa8.56□□□□□ -1.04
PABPC1-220ENST00000522658 UBR3Q6ZT12 1888 aa8.55□□□□□ -1.04
PABPC1-220ENST00000522658 ITGB4P16144 1822 aa8.55□□□□□ -1.04
PABPC1-220ENST00000522658 HSP90AB1P08238 724 aaKnown RBP8.55□□□□□ -1.04
PABPC1-220ENST00000522658 RFC4P35249 363 aa8.55□□□□□ -1.04
PABPC1-220ENST00000522658 TGFB2P61812 414 aa8.55□□□□□ -1.04
PABPC1-220ENST00000522658 DHX9Q08211 1270 aaKnown RBP8.55□□□□□ -1.04
PABPC1-220ENST00000522658 TRAPPC3LQ5T215 181 aa8.55□□□□□ -1.04
PABPC1-220ENST00000522658 ARHGAP27Q6ZUM4 889 aa8.55□□□□□ -1.04
PABPC1-220ENST00000522658 ZBTB33Q86T24 672 aa8.55□□□□□ -1.04
PABPC1-220ENST00000522658 NLGN1Q8N2Q7 840 aa8.55□□□□□ -1.04
PABPC1-220ENST00000522658 LINC00116Q8NCU8 138 aa8.55□□□□□ -1.04
PABPC1-220ENST00000522658 EPS8L1Q8TE68 723 aa8.55□□□□□ -1.04
PABPC1-220ENST00000522658 NANOS1Q8WY41 292 aaKnown RBP8.55□□□□□ -1.04
PABPC1-220ENST00000522658 FIGNL2A6NMB9 653 aa8.54□□□□□ -1.04
PABPC1-220ENST00000522658 TOMM70O94826 608 aa8.54□□□□□ -1.04
PABPC1-220ENST00000522658 ADAM32Q8TC27 787 aa8.54□□□□□ -1.04
PABPC1-220ENST00000522658 DDRGK1Q96HY6 314 aa8.54□□□□□ -1.04
PABPC1-220ENST00000522658 KDM2BQ8NHM5 1336 aa8.54□□□□□ -1.04
PABPC1-220ENST00000522658 PXDNLA1KZ92 1463 aa8.53□□□□□ -1.04
PABPC1-220ENST00000522658 SLC35F4A4IF30 521 aa8.53□□□□□ -1.04
PABPC1-220ENST00000522658 PHKG2P15735 406 aa8.53□□□□□ -1.04
PABPC1-220ENST00000522658 GSK3AP49840 483 aa8.53□□□□□ -1.04
PABPC1-220ENST00000522658 PTK2Q05397 1052 aa8.53□□□□□ -1.04
PABPC1-220ENST00000522658 C1orf141Q5JVX7 400 aa8.53□□□□□ -1.04
PABPC1-220ENST00000522658 ASAP1Q9ULH1 1129 aa8.53□□□□□ -1.04
PABPC1-220ENST00000522658 ANKRD26Q9UPS8 1709 aa8.53□□□□□ -1.04
PABPC1-220ENST00000522658 CEP350Q5VT06 3117 aa8.53□□□□□ -1.04
PABPC1-220ENST00000522658 C10orf71Q711Q0 1435 aa8.53□□□□□ -1.04
PABPC1-220ENST00000522658 TNNT2P45379 298 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-220ENST00000522658 CABP4P57796 275 aa8.52□□□□□ -1.05
PABPC1-220ENST00000522658 SMIM5Q71RC9 77 aa8.52□□□□□ -1.05
PABPC1-220ENST00000522658 CCDC155Q8N6L0 562 aa8.52□□□□□ -1.05
PABPC1-220ENST00000522658 AGBL1Q96MI9 1066 aa8.52□□□□□ -1.05
PABPC1-220ENST00000522658 HMX1Q9NP08 348 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-220ENST00000522658 A0A0G2JLW4 131 aa8.51□□□□□ -1.05
PABPC1-220ENST00000522658 AP1G2O75843 785 aa8.51□□□□□ -1.05
PABPC1-220ENST00000522658 CTSOP43234 321 aaPredicted RBP8.51□□□□□ -1.05
PABPC1-220ENST00000522658 ITPK1Q13572 414 aa8.51□□□□□ -1.05
PABPC1-220ENST00000522658 PLEKHO1Q53GL0 409 aaPredicted RBP8.51□□□□□ -1.05
PABPC1-220ENST00000522658 ZNF530Q6P9A1 599 aaPredicted RBP8.51□□□□□ -1.05
PABPC1-220ENST00000522658 AMIGO3Q86WK7 504 aa8.51□□□□□ -1.05
PABPC1-220ENST00000522658 DCAF5Q96JK2 942 aa8.51□□□□□ -1.05
PABPC1-220ENST00000522658 WASHC2AQ641Q2 1341 aa8.51□□□□□ -1.05
PABPC1-220ENST00000522658 CNTNAP4Q9C0A0 1308 aa8.51□□□□□ -1.05
PABPC1-220ENST00000522658 ERVV-2B6SEH9 535 aa8.5□□□□□ -1.05
PABPC1-220ENST00000522658 C4AP0C0L4 1744 aa8.5□□□□□ -1.05
PABPC1-220ENST00000522658 DPEP1P16444 411 aa8.5□□□□□ -1.05
PABPC1-220ENST00000522658 KCNMA1Q12791 1236 aa8.5□□□□□ -1.05
PABPC1-220ENST00000522658 NCAPD2Q15021 1401 aa8.5□□□□□ -1.05
PABPC1-220ENST00000522658 AMOTQ4VCS5 1084 aa8.5□□□□□ -1.05
PABPC1-220ENST00000522658 DALRD3Q5D0E6 543 aaKnown RBP8.5□□□□□ -1.05
PABPC1-220ENST00000522658 C9orf131Q5VYM1 1079 aa8.5□□□□□ -1.05
PABPC1-220ENST00000522658 TMPRSS4Q9NRS4 437 aa8.5□□□□□ -1.05
PABPC1-220ENST00000522658 ATG3Q9NT62 314 aa8.5□□□□□ -1.05
PABPC1-220ENST00000522658 RNF181Q9P0P0 153 aa8.5□□□□□ -1.05
PABPC1-220ENST00000522658 PIM2Q9P1W9 311 aa8.5□□□□□ -1.05
PABPC1-220ENST00000522658 N4BP2Q86UW6 1770 aaPredicted RBP8.5□□□□□ -1.05
PABPC1-220ENST00000522658 KDRP35968 1356 aa8.49□□□□□ -1.05
PABPC1-220ENST00000522658 PTCD1O75127 700 aaKnown RBP8.49□□□□□ -1.05
PABPC1-220ENST00000522658 USP17L8P0C7I0 530 aa8.49□□□□□ -1.05
PABPC1-220ENST00000522658 FSTL1Q12841 308 aa8.49□□□□□ -1.05
PABPC1-220ENST00000522658 NBPF20Q3BBV1 942 aa8.49□□□□□ -1.05
PABPC1-220ENST00000522658 KDF1Q8NAX2 398 aaPredicted RBP8.49□□□□□ -1.05
PABPC1-220ENST00000522658 CNTNAP3BQ96NU0 1288 aa8.49□□□□□ -1.05
PABPC1-220ENST00000522658 INSM2Q96T92 566 aaPredicted RBP8.49□□□□□ -1.05
PABPC1-220ENST00000522658 COL25A1Q9BXS0 654 aaPredicted RBP8.49□□□□□ -1.05
PABPC1-220ENST00000522658 CNTNAP3Q9BZ76 1288 aa8.49□□□□□ -1.05
PABPC1-220ENST00000522658 NMRK2Q9NPI5 230 aa8.49□□□□□ -1.05
PABPC1-220ENST00000522658 WDR90Q96KV7 1748 aa8.49□□□□□ -1.05
PABPC1-220ENST00000522658 MAP2P11137 1827 aaKnown RBP8.48□□□□□ -1.05
PABPC1-220ENST00000522658 ESPNB1AK53 854 aa8.48□□□□□ -1.05
PABPC1-220ENST00000522658 NPHP1O15259 732 aa8.48□□□□□ -1.05
PABPC1-220ENST00000522658 LILRA1O75019 489 aa8.48□□□□□ -1.05
PABPC1-220ENST00000522658 RPS6KA4O75676 772 aa8.48□□□□□ -1.05
PABPC1-220ENST00000522658 GYS1P13807 737 aa8.48□□□□□ -1.05
PABPC1-220ENST00000522658 MTHFSP49914 203 aa8.48□□□□□ -1.05
PABPC1-220ENST00000522658 RELBQ01201 579 aa8.48□□□□□ -1.05
PABPC1-220ENST00000522658 EIF4A2Q14240 407 aaKnown RBP8.48□□□□□ -1.05
PABPC1-220ENST00000522658 RNFT1Q5M7Z0 435 aa8.48□□□□□ -1.05
PABPC1-220ENST00000522658 SMC1BQ8NDV3 1235 aa8.48□□□□□ -1.05
PABPC1-220ENST00000522658 RNF217Q8TC41 542 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms