RNA–Protein interactions for RNA: ENST00000521667.5

TRAPPC9-210, Transcript of trafficking protein particle complex 9, humanhuman

TSL 1 (best)

Gene TRAPPC9, Length 2,021 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-210ENST00000521667 HELBQ8NG08 1087 aaPredicted RBP22.09■■□□□ 1.13
TRAPPC9-210ENST00000521667 DSCC1Q9BVC3 393 aa22.09■■□□□ 1.13
TRAPPC9-210ENST00000521667 TAF6LQ9Y6J9 622 aa22.09■■□□□ 1.13
TRAPPC9-210ENST00000521667 TRAK2O60296 914 aa22.08■■□□□ 1.13
TRAPPC9-210ENST00000521667 BAG4O95429 457 aaKnown RBP22.08■■□□□ 1.13
TRAPPC9-210ENST00000521667 TBC1D9BQ66K14 1250 aa22.08■■□□□ 1.13
TRAPPC9-210ENST00000521667 ZSCAN31Q96LW9 406 aaPredicted RBP22.08■■□□□ 1.13
TRAPPC9-210ENST00000521667 ZDHHC9Q9Y397 364 aa22.08■■□□□ 1.13
TRAPPC9-210ENST00000521667 RTCBQ9Y3I0 505 aaKnown RBP22.08■■□□□ 1.13
TRAPPC9-210ENST00000521667 CCDC102BQ68D86 513 aa22.07■■□□□ 1.12
TRAPPC9-210ENST00000521667 PI16Q6UXB8 463 aa22.07■■□□□ 1.12
TRAPPC9-210ENST00000521667 TAF1LQ8IZX4 1826 aa22.07■■□□□ 1.12
TRAPPC9-210ENST00000521667 UQCRFS1P1P0C7P4 283 aa22.07■■□□□ 1.12
TRAPPC9-210ENST00000521667 SLC5A1P13866 664 aa22.07■■□□□ 1.12
TRAPPC9-210ENST00000521667 ARID4AP29374 1257 aaPredicted RBP22.07■■□□□ 1.12
TRAPPC9-210ENST00000521667 BICDL1Q6ZP65 573 aa22.07■■□□□ 1.12
TRAPPC9-210ENST00000521667 LARP6Q9BRS8 491 aaKnown RBP22.07■■□□□ 1.12
TRAPPC9-210ENST00000521667 GOLGA6L22H0YM25 854 aa22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 ZPR1O75312 459 aa22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 RPS6KB1P23443 525 aa22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 POTEAQ6S8J7 498 aa22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 SH2B1Q9NRF2 756 aaPredicted RBP22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 SRP68Q9UHB9 627 aaKnown RBP22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 M0R2C6 588 aa22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 CYP21A2P08686 494 aa22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 PHKA1P46020 1223 aa22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 TTF1Q15361 905 aaPredicted RBP22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 SF3B3Q15393 1217 aaKnown RBP22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 AMIGO3Q86WK7 504 aa22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 OSBP2Q969R2 916 aa22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 CDC5LQ99459 802 aaKnown RBP22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 ALDH8A1Q9H2A2 487 aaPredicted RBP22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 LRRC4BQ9NT99 713 aa22.06■■□□□ 1.12
TRAPPC9-210ENST00000521667 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.05■■□□□ 1.12
TRAPPC9-210ENST00000521667 HSPD1P10809 573 aaKnown RBP22.04■■□□□ 1.12
TRAPPC9-210ENST00000521667 ANKRD1Q15327 319 aa22.04■■□□□ 1.12
TRAPPC9-210ENST00000521667 SLC10A5Q5PT55 438 aa22.04■■□□□ 1.12
TRAPPC9-210ENST00000521667 DDX24Q9GZR7 859 aaKnown RBP eCLIP22.04■■□□□ 1.12
TRAPPC9-210ENST00000521667 NYXQ9GZU5 481 aa22.04■■□□□ 1.12
TRAPPC9-210ENST00000521667 ARAP2Q8WZ64 1704 aa22.04■■□□□ 1.12
TRAPPC9-210ENST00000521667 LARGE1O95461 756 aa22.04■■□□□ 1.12
TRAPPC9-210ENST00000521667 BRD1O95696 1058 aa22.04■■□□□ 1.12
TRAPPC9-210ENST00000521667 GTF2E1P29083 439 aaPredicted RBP22.04■■□□□ 1.12
TRAPPC9-210ENST00000521667 COL9A3Q14050 684 aaPredicted RBP22.04■■□□□ 1.12
TRAPPC9-210ENST00000521667 WASHC4Q2M389 1173 aa22.04■■□□□ 1.12
TRAPPC9-210ENST00000521667 APPBP2Q92624 585 aa22.04■■□□□ 1.12
TRAPPC9-210ENST00000521667 NEK1Q96PY6 1258 aa22.04■■□□□ 1.12
TRAPPC9-210ENST00000521667 SETDB2Q96T68 719 aa22.04■■□□□ 1.12
TRAPPC9-210ENST00000521667 ZSCAN25Q6NSZ9 544 aa22.03■■□□□ 1.12
TRAPPC9-210ENST00000521667 C3orf67Q6ZVT6 689 aa22.03■■□□□ 1.12
TRAPPC9-210ENST00000521667 ARHGEF1Q92888 912 aaKnown RBP22.03■■□□□ 1.12
TRAPPC9-210ENST00000521667 C4BP0C0L5 1744 aa22.02■■□□□ 1.12
TRAPPC9-210ENST00000521667 CHRNDQ07001 517 aa22.02■■□□□ 1.12
TRAPPC9-210ENST00000521667 ME3Q16798 604 aa22.01■■□□□ 1.11
TRAPPC9-210ENST00000521667 SKOR2Q2VWA4 1001 aaPredicted RBP22.01■■□□□ 1.11
TRAPPC9-210ENST00000521667 ANKRD18AQ8IVF6 992 aa22.01■■□□□ 1.11
TRAPPC9-210ENST00000521667 TPCN1Q9ULQ1 816 aa22.01■■□□□ 1.11
TRAPPC9-210ENST00000521667 SNAP23O00161 211 aa22.01■■□□□ 1.11
TRAPPC9-210ENST00000521667 NBPF5PQ86XG9 351 aaPredicted RBP22.01■■□□□ 1.11
TRAPPC9-210ENST00000521667 CCDC83Q8IWF9 413 aa22.01■■□□□ 1.11
TRAPPC9-210ENST00000521667 TCEANC2Q96MN5 208 aa22.01■■□□□ 1.11
TRAPPC9-210ENST00000521667 PIH1D3Q9NQM4 214 aaKnown RBP22.01■■□□□ 1.11
TRAPPC9-210ENST00000521667 AKAP11Q9UKA4 1901 aa22■■□□□ 1.11
TRAPPC9-210ENST00000521667 ADD2P35612 726 aa22■■□□□ 1.11
TRAPPC9-210ENST00000521667 SMC3Q9UQE7 1217 aa22■■□□□ 1.11
TRAPPC9-210ENST00000521667 COL24A1Q17RW2 1714 aa21.99■■□□□ 1.11
TRAPPC9-210ENST00000521667 TOB2Q14106 344 aaPredicted RBP21.99■■□□□ 1.11
TRAPPC9-210ENST00000521667 TRAPPC3LQ5T215 181 aa21.99■■□□□ 1.11
TRAPPC9-210ENST00000521667 MCTP1Q6DN14 999 aa21.99■■□□□ 1.11
TRAPPC9-210ENST00000521667 PUS7LQ9H0K6 701 aaKnown RBP21.99■■□□□ 1.11
TRAPPC9-210ENST00000521667 PHF14O94880 888 aa21.99■■□□□ 1.11
TRAPPC9-210ENST00000521667 HMGB1P09429 215 aaKnown RBP21.99■■□□□ 1.11
TRAPPC9-210ENST00000521667 SLC9C2Q5TAH2 1124 aa21.99■■□□□ 1.11
TRAPPC9-210ENST00000521667 SPATA5Q8NB90 893 aa21.99■■□□□ 1.11
TRAPPC9-210ENST00000521667 BSDC1Q9NW68 430 aaPredicted RBP21.99■■□□□ 1.11
TRAPPC9-210ENST00000521667 COL4A1P02462 1669 aa21.98■■□□□ 1.11
TRAPPC9-210ENST00000521667 WDR33Q9C0J8 1336 aaKnown RBP21.98■■□□□ 1.11
TRAPPC9-210ENST00000521667 RFC4P35249 363 aa21.98■■□□□ 1.11
TRAPPC9-210ENST00000521667 TPTE2Q6XPS3 522 aa21.98■■□□□ 1.11
TRAPPC9-210ENST00000521667 STOX1Q6ZVD7 989 aa21.98■■□□□ 1.11
TRAPPC9-210ENST00000521667 CTNNA3Q9UI47 895 aa21.98■■□□□ 1.11
TRAPPC9-210ENST00000521667 IDH1O75874 414 aaKnown RBP21.97■■□□□ 1.11
TRAPPC9-210ENST00000521667 ST3GAL1Q11201 340 aa21.97■■□□□ 1.11
TRAPPC9-210ENST00000521667 RASGRF1Q13972 1273 aa21.97■■□□□ 1.11
TRAPPC9-210ENST00000521667 UBE3CQ15386 1083 aa21.97■■□□□ 1.11
TRAPPC9-210ENST00000521667 FOXD4L5Q5VV16 416 aaPredicted RBP21.97■■□□□ 1.11
TRAPPC9-210ENST00000521667 FOXD4L4Q8WXT5 416 aaPredicted RBP21.97■■□□□ 1.11
TRAPPC9-210ENST00000521667 NLRP3Q96P20 1036 aa21.97■■□□□ 1.11
TRAPPC9-210ENST00000521667 FOXP2O15409 715 aa21.96■■□□□ 1.11
TRAPPC9-210ENST00000521667 GPAA1O43292 621 aa21.96■■□□□ 1.11
TRAPPC9-210ENST00000521667 PROM2Q8N271 834 aa21.96■■□□□ 1.11
TRAPPC9-210ENST00000521667 BCAMP50895 628 aa21.96■■□□□ 1.11
TRAPPC9-210ENST00000521667 NECAB1Q8N987 351 aa21.96■■□□□ 1.11
TRAPPC9-210ENST00000521667 GZF1Q9H116 711 aaPredicted RBP21.96■■□□□ 1.11
TRAPPC9-210ENST00000521667 PDE6AP16499 860 aa21.95■■□□□ 1.1
TRAPPC9-210ENST00000521667 ADRA2BP18089 450 aa21.95■■□□□ 1.1
TRAPPC9-210ENST00000521667 ZNF532Q9HCE3 1301 aa21.94■■□□□ 1.1
TRAPPC9-210ENST00000521667 A0A0G2JLW4 131 aa21.94■■□□□ 1.1
TRAPPC9-210ENST00000521667 E7EWF7 191 aa21.94■■□□□ 1.1
TRAPPC9-210ENST00000521667 C4AP0C0L4 1744 aa21.94■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms