RNA–Protein interactions for RNA: ENST00000521491.1

CDH17-205, Transcript of cadherin 17, human

TSL 5

Gene CDH17, Length 637 nt, Biotype protein coding, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CDH17-205	ENST00000521491	ZNF831	Q5JPB2	1677 aa		6.9	□□□□□ -1.31
CDH17-205	ENST00000521491	ARFGEF2	Q9Y6D5	1785 aa		6.9	□□□□□ -1.31
CDH17-205	ENST00000521491	APBB1	O00213	710 aa		6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	PTCD1	O75127	700 aa	Known RBP	6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	RPS6KA4	O75676	772 aa		6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	AP1G2	O75843	785 aa		6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	EIF2S2	P20042	333 aa	Known RBP	6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	CANX	P27824	592 aa	Known RBP	6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	RFC4	P35249	363 aa		6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	ALDH1L2	Q3SY69	923 aa		6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	RC3H1	Q5TC82	1133 aa	Known RBP	6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	RETREG3	Q86VR2	466 aa		6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	FRAT1	Q92837	279 aa	Predicted RBP	6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	ZNF496	Q96IT1	587 aa	Predicted RBP	6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	FMNL2	Q96PY5	1086 aa		6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	CCDC87	Q9NVE4	849 aa		6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	TNN	Q9UQP3	1299 aa		6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	PARP3	Q9Y6F1	533 aa		6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	RNF123	Q5XPI4	1314 aa		6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	HEG1	Q9ULI3	1381 aa		6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	WDR90	Q96KV7	1748 aa		6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	AFDN	P55196	1824 aa	Known RBP	6.89	□□□□□ -1.31
CDH17-205	ENST00000521491	ARFGEF1	Q9Y6D6	1849 aa		6.88	□□□□□ -1.31
CDH17-205	ENST00000521491	CNTNAP4	Q9C0A0	1308 aa		6.88	□□□□□ -1.31
CDH17-205	ENST00000521491	NEFL	P07196	543 aa		6.88	□□□□□ -1.31
CDH17-205	ENST00000521491	CHRNA5	P30532	468 aa		6.88	□□□□□ -1.31
CDH17-205	ENST00000521491	PTPN5	P54829	565 aa		6.88	□□□□□ -1.31
CDH17-205	ENST00000521491	DDR1	Q08345	913 aa		6.88	□□□□□ -1.31
CDH17-205	ENST00000521491	COL13A1	Q5TAT6	717 aa	Predicted RBP	6.88	□□□□□ -1.31
CDH17-205	ENST00000521491	C20orf194	Q5TEA3	1177 aa		6.88	□□□□□ -1.31
CDH17-205	ENST00000521491	HDGFL1	Q5TGJ6	251 aa		6.88	□□□□□ -1.31
CDH17-205	ENST00000521491	BLOC1S3	Q6QNY0	202 aa		6.88	□□□□□ -1.31
CDH17-205	ENST00000521491	SCUBE3	Q8IX30	993 aa		6.88	□□□□□ -1.31
CDH17-205	ENST00000521491	KIF16B	Q96L93	1317 aa		6.87	□□□□□ -1.31
CDH17-205	ENST00000521491	FMNL1	O95466	1100 aa	Predicted RBP	6.87	□□□□□ -1.31
CDH17-205	ENST00000521491	ANXA1	P04083	346 aa		6.87	□□□□□ -1.31
CDH17-205	ENST00000521491	HOXB7	P09629	217 aa		6.87	□□□□□ -1.31
CDH17-205	ENST00000521491	USP17L8	P0C7I0	530 aa		6.87	□□□□□ -1.31
CDH17-205	ENST00000521491	CRKL	P46109	303 aa	Known RBP	6.87	□□□□□ -1.31
CDH17-205	ENST00000521491	INTS5	Q6P9B9	1019 aa	Known RBP	6.87	□□□□□ -1.31
CDH17-205	ENST00000521491	PRR7	Q8TB68	274 aa		6.87	□□□□□ -1.31
CDH17-205	ENST00000521491	RRAGC	Q9HB90	399 aa		6.87	□□□□□ -1.31
CDH17-205	ENST00000521491	RNF181	Q9P0P0	153 aa		6.87	□□□□□ -1.31
CDH17-205	ENST00000521491	PIM2	Q9P1W9	311 aa		6.87	□□□□□ -1.31
CDH17-205	ENST00000521491	CHPF2	Q9P2E5	772 aa		6.87	□□□□□ -1.31
CDH17-205	ENST00000521491	NOB1	Q9ULX3	412 aa	Known RBP	6.87	□□□□□ -1.31
CDH17-205	ENST00000521491	SBF1	O95248	1867 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	SOS1	Q07889	1333 aa	Predicted RBP	6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	USP42	Q9H9J4	1324 aa	Known RBP	6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	CFAP99	D6REC4	459 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	SNRPA1	P09661	255 aa	Known RBP	6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	PIP4K2A	P48426	406 aa	Predicted RBP	6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	PRELP	P51888	382 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	PROSER3	Q2NL68	480 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	DALRD3	Q5D0E6	543 aa	Known RBP	6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	CCDC30	Q5VVM6	783 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	DESI1	Q6ICB0	168 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	BRICD5	Q6PL45	260 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	RNF19B	Q6ZMZ0	732 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	G2E3	Q7L622	706 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	C16orf71	Q8IYS4	520 aa	Predicted RBP	6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	TSC1	Q92574	1164 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	SYMPK	Q92797	1274 aa	Known RBP	6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	CLUAP1	Q96AJ1	413 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	ZNF428	Q96B54	188 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	KLRG1	Q96E93	195 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	USB1	Q9BQ65	265 aa	Known RBP	6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	STK31	Q9BXU1	1019 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	ZMYND15	Q9H091	742 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	USP16	Q9Y5T5	823 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	ANKRD36C	Q5JPF3	1778 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	BCOR	Q6W2J9	1755 aa		6.86	□□□□□ -1.31
CDH17-205	ENST00000521491	POLRMT	O00411	1230 aa	Known RBP	6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	RLBP1	P12271	317 aa		6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	TRIM27	P14373	513 aa		6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	TM4SF1	P30408	202 aa		6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	COPS2	P61201	443 aa		6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	RASSF7	Q02833	373 aa		6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	FSTL1	Q12841	308 aa		6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	ZKSCAN2	Q63HK3	967 aa		6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	DNAJC10	Q8IXB1	793 aa		6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	JMY	Q8N9B5	988 aa		6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	PANK1	Q8TE04	598 aa		6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	THAP11	Q96EK4	314 aa		6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	CRBN	Q96SW2	442 aa		6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	PHAX	Q9H814	394 aa	Known RBP	6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	SNRK	Q9NRH2	765 aa		6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	NUP98	P52948	1817 aa		6.85	□□□□□ -1.31
CDH17-205	ENST00000521491	SCN7A	Q01118	1682 aa		6.84	□□□□□ -1.31
CDH17-205	ENST00000521491	KDM2B	Q8NHM5	1336 aa		6.84	□□□□□ -1.31
CDH17-205	ENST00000521491	RAD21	O60216	631 aa		6.84	□□□□□ -1.31
CDH17-205	ENST00000521491	MYL6B	P14649	208 aa		6.84	□□□□□ -1.31
CDH17-205	ENST00000521491	USPL1	Q5W0Q7	1092 aa		6.84	□□□□□ -1.31
CDH17-205	ENST00000521491	ATF7IP	Q6VMQ6	1270 aa		6.84	□□□□□ -1.31
CDH17-205	ENST00000521491	FTSJ3	Q8IY81	847 aa	Known RBP	6.84	□□□□□ -1.31
CDH17-205	ENST00000521491	MTMR14	Q8NCE2	650 aa		6.84	□□□□□ -1.31
CDH17-205	ENST00000521491	EXOC6	Q8TAG9	804 aa		6.84	□□□□□ -1.31
CDH17-205	ENST00000521491	RNF166	Q96A37	237 aa	Predicted RBP	6.84	□□□□□ -1.31
CDH17-205	ENST00000521491	MTR	Q99707	1265 aa		6.84	□□□□□ -1.31

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