RNA–Protein interactions for RNA: ENST00000521118.5

CDKL3-206, Transcript of cyclin dependent kinase like 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CDKL3, Length 2,160 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3-206ENST00000521118 FAM177BA6PVY3 158 aa17.52■□□□□ 0.4
CDKL3-206ENST00000521118 EIF5P55010 431 aaKnown RBP17.52■□□□□ 0.4
CDKL3-206ENST00000521118 DDB1Q16531 1140 aa17.52■□□□□ 0.4
CDKL3-206ENST00000521118 E7EWF7 191 aa17.52■□□□□ 0.39
CDKL3-206ENST00000521118 CRKLP46109 303 aaKnown RBP17.52■□□□□ 0.39
CDKL3-206ENST00000521118 EXOSC10Q01780 885 aaKnown RBP17.52■□□□□ 0.39
CDKL3-206ENST00000521118 SCRN1Q12765 414 aa17.52■□□□□ 0.39
CDKL3-206ENST00000521118 SUSD4Q5VX71 490 aa17.52■□□□□ 0.39
CDKL3-206ENST00000521118 RNF214Q8ND24 703 aa17.52■□□□□ 0.39
CDKL3-206ENST00000521118 PUS7LQ9H0K6 701 aaKnown RBP17.52■□□□□ 0.39
CDKL3-206ENST00000521118 LRP5O75197 1615 aa17.51■□□□□ 0.39
CDKL3-206ENST00000521118 COL4A1P02462 1669 aa17.51■□□□□ 0.39
CDKL3-206ENST00000521118 ANKRD18BA2A2Z9 1011 aa17.51■□□□□ 0.39
CDKL3-206ENST00000521118 ERVV-1B6SEH8 477 aa17.51■□□□□ 0.39
CDKL3-206ENST00000521118 SNAP23O00161 211 aa17.51■□□□□ 0.39
CDKL3-206ENST00000521118 HCLS1P14317 486 aaPredicted RBP17.51■□□□□ 0.39
CDKL3-206ENST00000521118 APOBRQ0VD83 1088 aa17.51■□□□□ 0.39
CDKL3-206ENST00000521118 HELBQ8NG08 1087 aaPredicted RBP17.51■□□□□ 0.39
CDKL3-206ENST00000521118 GPHNQ9NQX3 736 aaPredicted RBP17.51■□□□□ 0.39
CDKL3-206ENST00000521118 CNNM1Q9NRU3 951 aa17.51■□□□□ 0.39
CDKL3-206ENST00000521118 PDE8AO60658 829 aa17.5■□□□□ 0.39
CDKL3-206ENST00000521118 HSP90B1P14625 803 aaKnown RBP17.5■□□□□ 0.39
CDKL3-206ENST00000521118 RREB1Q92766 1687 aa17.5■□□□□ 0.39
CDKL3-206ENST00000521118 KCNQ2O43526 872 aa17.5■□□□□ 0.39
CDKL3-206ENST00000521118 CTDNEP1O95476 244 aa17.5■□□□□ 0.39
CDKL3-206ENST00000521118 HAND2P61296 217 aa17.5■□□□□ 0.39
CDKL3-206ENST00000521118 UBE2HP62256 183 aa17.5■□□□□ 0.39
CDKL3-206ENST00000521118 CCDC173Q0VFZ6 552 aa17.5■□□□□ 0.39
CDKL3-206ENST00000521118 DHX32Q7L7V1 743 aaKnown RBP17.5■□□□□ 0.39
CDKL3-206ENST00000521118 DDX11Q96FC9 970 aa17.5■□□□□ 0.39
CDKL3-206ENST00000521118 PPFIA3O75145 1194 aa17.49■□□□□ 0.39
CDKL3-206ENST00000521118 ATP6V1AP38606 617 aa17.49■□□□□ 0.39
CDKL3-206ENST00000521118 WASHC4Q2M389 1173 aa17.49■□□□□ 0.39
CDKL3-206ENST00000521118 TTC6Q86TZ1 520 aa17.49■□□□□ 0.39
CDKL3-206ENST00000521118 PIH1D3Q9NQM4 214 aaKnown RBP17.49■□□□□ 0.39
CDKL3-206ENST00000521118 CCDC87Q9NVE4 849 aa17.49■□□□□ 0.39
CDKL3-206ENST00000521118 SPATA31A5Q5VU36 1347 aa17.49■□□□□ 0.39
CDKL3-206ENST00000521118 SPATA31A7Q8IWB4 1347 aa17.49■□□□□ 0.39
CDKL3-206ENST00000521118 DDX60Q8IY21 1712 aaKnown RBP17.49■□□□□ 0.39
CDKL3-206ENST00000521118 LOC102724428A0A0B4J2F2 783 aa17.49■□□□□ 0.39
CDKL3-206ENST00000521118 PHKA1P46020 1223 aa17.49■□□□□ 0.39
CDKL3-206ENST00000521118 SIK1P57059 783 aa17.49■□□□□ 0.39
CDKL3-206ENST00000521118 NKX2-3Q8TAU0 364 aa17.49■□□□□ 0.39
CDKL3-206ENST00000521118 CAMTA2O94983 1202 aa17.48■□□□□ 0.39
CDKL3-206ENST00000521118 NCOA5Q9HCD5 579 aaKnown RBP17.48■□□□□ 0.39
CDKL3-206ENST00000521118 SEC31BQ9NQW1 1179 aa17.48■□□□□ 0.39
CDKL3-206ENST00000521118 ATP6V1DQ9Y5K8 247 aa17.48■□□□□ 0.39
CDKL3-206ENST00000521118 TSPY26PQ9H489 355 aa17.47■□□□□ 0.39
CDKL3-206ENST00000521118 PFKFB2O60825 505 aa17.47■□□□□ 0.39
CDKL3-206ENST00000521118 PDE8BO95263 885 aa17.47■□□□□ 0.39
CDKL3-206ENST00000521118 FOSBP53539 338 aa17.47■□□□□ 0.39
CDKL3-206ENST00000521118 TICAM2Q86XR7 235 aa17.47■□□□□ 0.39
CDKL3-206ENST00000521118 AGXT2Q9BYV1 514 aa17.47■□□□□ 0.39
CDKL3-206ENST00000521118 ESPNB1AK53 854 aa17.46■□□□□ 0.39
CDKL3-206ENST00000521118 FGAP02671 866 aa17.46■□□□□ 0.39
CDKL3-206ENST00000521118 CCT2P78371 535 aaKnown RBP17.46■□□□□ 0.39
CDKL3-206ENST00000521118 CCDC183Q5T5S1 534 aa17.46■□□□□ 0.39
CDKL3-206ENST00000521118 NSUN7Q8NE18 718 aaKnown RBP17.46■□□□□ 0.39
CDKL3-206ENST00000521118 APPBP2Q92624 585 aa17.46■□□□□ 0.39
CDKL3-206ENST00000521118 PDLIM2Q96JY6 352 aa17.46■□□□□ 0.39
CDKL3-206ENST00000521118 TFIP11Q9UBB9 837 aaKnown RBP17.46■□□□□ 0.39
CDKL3-206ENST00000521118 DENND2AQ9ULE3 1009 aa17.46■□□□□ 0.39
CDKL3-206ENST00000521118 THRAP3Q9Y2W1 955 aaKnown RBP17.46■□□□□ 0.39
CDKL3-206ENST00000521118 ARAP2Q8WZ64 1704 aa17.46■□□□□ 0.39
CDKL3-206ENST00000521118 KCNQ4P56696 695 aa17.46■□□□□ 0.39
CDKL3-206ENST00000521118 PIP4K2BP78356 416 aa17.46■□□□□ 0.39
CDKL3-206ENST00000521118 CCDC102BQ68D86 513 aa17.46■□□□□ 0.39
CDKL3-206ENST00000521118 SMIM5Q71RC9 77 aa17.46■□□□□ 0.39
CDKL3-206ENST00000521118 SMARCC2Q8TAQ2 1214 aa17.46■□□□□ 0.39
CDKL3-206ENST00000521118 SYAP1Q96A49 352 aaPredicted RBP17.46■□□□□ 0.39
CDKL3-206ENST00000521118 CDCA7Q9BWT1 371 aaPredicted RBP17.46■□□□□ 0.39
CDKL3-206ENST00000521118 NBPF3Q9H094 633 aa17.46■□□□□ 0.39
CDKL3-206ENST00000521118 ABCC12Q96J65 1359 aa17.45■□□□□ 0.38
CDKL3-206ENST00000521118 GPAA1O43292 621 aa17.45■□□□□ 0.38
CDKL3-206ENST00000521118 FGFR2P21802 821 aa17.45■□□□□ 0.38
CDKL3-206ENST00000521118 FGD1P98174 961 aa17.45■□□□□ 0.38
CDKL3-206ENST00000521118 RESTQ13127 1097 aa17.45■□□□□ 0.38
CDKL3-206ENST00000521118 HMGB1P09429 215 aaKnown RBP17.45■□□□□ 0.38
CDKL3-206ENST00000521118 PDCP20941 246 aa17.45■□□□□ 0.38
CDKL3-206ENST00000521118 PTF1AQ7RTS3 328 aa17.45■□□□□ 0.38
CDKL3-206ENST00000521118 ZFYP08048 801 aaPredicted RBP17.44■□□□□ 0.38
CDKL3-206ENST00000521118 ADD2P35612 726 aa17.44■□□□□ 0.38
CDKL3-206ENST00000521118 TRIM44Q96DX7 344 aaPredicted RBP17.44■□□□□ 0.38
CDKL3-206ENST00000521118 WWC3Q9ULE0 1092 aa17.44■□□□□ 0.38
CDKL3-206ENST00000521118 COL5A3P25940 1745 aaPredicted RBP17.44■□□□□ 0.38
CDKL3-206ENST00000521118 LIG1P18858 919 aa17.43■□□□□ 0.38
CDKL3-206ENST00000521118 PDIA3P30101 505 aaKnown RBP17.43■□□□□ 0.38
CDKL3-206ENST00000521118 ANTXR2P58335 489 aa17.43■□□□□ 0.38
CDKL3-206ENST00000521118 GIMAP6Q6P9H5 292 aa17.43■□□□□ 0.38
CDKL3-206ENST00000521118 CICQ96RK0 1608 aaPredicted RBP17.43■□□□□ 0.38
CDKL3-206ENST00000521118 PTPDC1A2A3K4 754 aa17.43■□□□□ 0.38
CDKL3-206ENST00000521118 NTSR2O95665 410 aa17.43■□□□□ 0.38
CDKL3-206ENST00000521118 ARID4AP29374 1257 aaPredicted RBP17.43■□□□□ 0.38
CDKL3-206ENST00000521118 KRT85P78386 507 aa17.43■□□□□ 0.38
CDKL3-206ENST00000521118 SLC9C2Q5TAH2 1124 aa17.43■□□□□ 0.38
CDKL3-206ENST00000521118 ZNF512BQ96KM6 892 aaPredicted RBP17.43■□□□□ 0.38
CDKL3-206ENST00000521118 UTP14AQ9BVJ6 771 aaKnown RBP17.43■□□□□ 0.38
CDKL3-206ENST00000521118 CLCN1P35523 988 aa17.42■□□□□ 0.38
CDKL3-206ENST00000521118 FUCA2Q9BTY2 467 aa17.42■□□□□ 0.38
CDKL3-206ENST00000521118 NAP1L2Q9ULW6 460 aaPredicted RBP17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms