RNA–Protein interactions for RNA: ENST00000521037.1

VPS13B-208, Transcript of vacuolar protein sorting 13 homolog B, humanhuman

TSL 5

Gene VPS13B, Length 486 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13B-208ENST00000521037 DOLKQ9UPQ8 538 aa6.26□□□□□ -1.41
VPS13B-208ENST00000521037 USP3Q9Y6I4 520 aa6.26□□□□□ -1.41
VPS13B-208ENST00000521037 KIF15Q9NS87 1388 aa6.26□□□□□ -1.41
VPS13B-208ENST00000521037 ADGRL2O95490 1459 aa6.26□□□□□ -1.41
VPS13B-208ENST00000521037 NRKQ7Z2Y5 1582 aa6.26□□□□□ -1.41
VPS13B-208ENST00000521037 ABCC5O15440 1437 aa6.25□□□□□ -1.41
VPS13B-208ENST00000521037 DCDC2BA2VCK2 349 aa6.25□□□□□ -1.41
VPS13B-208ENST00000521037 TMEM229AB2RXF0 380 aa6.25□□□□□ -1.41
VPS13B-208ENST00000521037 CDK2AP1O14519 115 aa6.25□□□□□ -1.41
VPS13B-208ENST00000521037 KCNQ2O43526 872 aa6.25□□□□□ -1.41
VPS13B-208ENST00000521037 FAM157BP0CG42 384 aa6.25□□□□□ -1.41
VPS13B-208ENST00000521037 TSPY4P0CV99 314 aa6.25□□□□□ -1.41
VPS13B-208ENST00000521037 TSPY10P0CW01 314 aa6.25□□□□□ -1.41
VPS13B-208ENST00000521037 SPATA31C1P0DKV0 1188 aa6.25□□□□□ -1.41
VPS13B-208ENST00000521037 GDF10P55107 478 aa6.25□□□□□ -1.41
VPS13B-208ENST00000521037 SAMD5Q5TGI4 173 aa6.25□□□□□ -1.41
VPS13B-208ENST00000521037 ROBO2Q9HCK4 1378 aa6.25□□□□□ -1.41
VPS13B-208ENST00000521037 MYOM1P52179 1685 aa6.25□□□□□ -1.41
VPS13B-208ENST00000521037 PLCH1Q4KWH8 1693 aa6.25□□□□□ -1.41
VPS13B-208ENST00000521037 RPRD2Q5VT52 1461 aaKnown RBP6.24□□□□□ -1.41
VPS13B-208ENST00000521037 SF3B2Q13435 895 aaKnown RBP6.24□□□□□ -1.41
VPS13B-208ENST00000521037 AIDAQ96BJ3 306 aa6.24□□□□□ -1.41
VPS13B-208ENST00000521037 TPSG1Q9NRR2 321 aa6.24□□□□□ -1.41
VPS13B-208ENST00000521037 ZDHHC3Q9NYG2 299 aa6.24□□□□□ -1.41
VPS13B-208ENST00000521037 NWD2Q9ULI1 1742 aa6.24□□□□□ -1.41
VPS13B-208ENST00000521037 KHNYNO15037 678 aaKnown RBP6.23□□□□□ -1.41
VPS13B-208ENST00000521037 TBC1D2BQ9UPU7 963 aa6.23□□□□□ -1.41
VPS13B-208ENST00000521037 STARD13Q9Y3M8 1113 aa6.23□□□□□ -1.41
VPS13B-208ENST00000521037 SPATA31A3Q5VYP0 1347 aa6.23□□□□□ -1.41
VPS13B-208ENST00000521037 ABCA3Q99758 1704 aa6.22□□□□□ -1.41
VPS13B-208ENST00000521037 PARD3Q8TEW0 1356 aa6.22□□□□□ -1.41
VPS13B-208ENST00000521037 ELOA3CA0A087WX78 387 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-208ENST00000521037 FAM83GA6ND36 823 aa6.22□□□□□ -1.41
VPS13B-208ENST00000521037 ELOA3DA6NLF2 546 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-208ENST00000521037 EIF4G2P78344 907 aaKnown RBP eCLIP6.22□□□□□ -1.41
VPS13B-208ENST00000521037 XPCQ01831 940 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-208ENST00000521037 LAMC2Q13753 1193 aa6.22□□□□□ -1.41
VPS13B-208ENST00000521037 ELOA3BQ3SY89 546 aa6.22□□□□□ -1.41
VPS13B-208ENST00000521037 SLFNL1Q499Z3 407 aa6.22□□□□□ -1.41
VPS13B-208ENST00000521037 OXLD1Q5BKU9 147 aa6.22□□□□□ -1.41
VPS13B-208ENST00000521037 ARSJQ5FYB0 599 aaPredicted RBP6.22□□□□□ -1.41
VPS13B-208ENST00000521037 ELOA3Q8NG57 546 aa6.22□□□□□ -1.41
VPS13B-208ENST00000521037 SIRT1Q96EB6 747 aa6.22□□□□□ -1.41
VPS13B-208ENST00000521037 SPON1Q9HCB6 807 aa6.22□□□□□ -1.41
VPS13B-208ENST00000521037 PCDHGA11Q9Y5H2 935 aa6.22□□□□□ -1.41
VPS13B-208ENST00000521037 CROCC2H7BZ55 1655 aa6.22□□□□□ -1.41
VPS13B-208ENST00000521037 A6NJY4 79 aa6.21□□□□□ -1.42
VPS13B-208ENST00000521037 ADARB2-AS1A8MUL3 147 aa6.21□□□□□ -1.42
VPS13B-208ENST00000521037 DYRK3O43781 588 aa6.21□□□□□ -1.42
VPS13B-208ENST00000521037 ARTNQ5T4W7 220 aa6.21□□□□□ -1.42
VPS13B-208ENST00000521037 DNAJC5GQ8N7S2 189 aa6.21□□□□□ -1.42
VPS13B-208ENST00000521037 PRDM6Q9NQX0 595 aa6.21□□□□□ -1.42
VPS13B-208ENST00000521037 RRP7BPQ9NSQ0 103 aa6.21□□□□□ -1.42
VPS13B-208ENST00000521037 MARK1Q9P0L2 795 aa6.21□□□□□ -1.42
VPS13B-208ENST00000521037 TRIM37O94972 964 aa6.2□□□□□ -1.42
VPS13B-208ENST00000521037 MAP7D1Q3KQU3 841 aa6.2□□□□□ -1.42
VPS13B-208ENST00000521037 COL13A1Q5TAT6 717 aaPredicted RBP6.2□□□□□ -1.42
VPS13B-208ENST00000521037 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.2□□□□□ -1.42
VPS13B-208ENST00000521037 SYT17Q9BSW7 474 aa6.2□□□□□ -1.42
VPS13B-208ENST00000521037 CHD4Q14839 1912 aa6.19□□□□□ -1.42
VPS13B-208ENST00000521037 IQGAP3Q86VI3 1631 aa6.19□□□□□ -1.42
VPS13B-208ENST00000521037 APBB1O00213 710 aa6.19□□□□□ -1.42
VPS13B-208ENST00000521037 FOXO3O43524 673 aa6.19□□□□□ -1.42
VPS13B-208ENST00000521037 SIN3BO75182 1162 aa6.19□□□□□ -1.42
VPS13B-208ENST00000521037 TXLNAP40222 546 aa6.19□□□□□ -1.42
VPS13B-208ENST00000521037 BRPF1P55201 1214 aaPredicted RBP6.19□□□□□ -1.42
VPS13B-208ENST00000521037 NBPF1Q3BBV0 1214 aa6.19□□□□□ -1.42
VPS13B-208ENST00000521037 SYT9Q86SS6 491 aa6.19□□□□□ -1.42
VPS13B-208ENST00000521037 ZDHHC1Q8WTX9 485 aa6.19□□□□□ -1.42
VPS13B-208ENST00000521037 SERTAD1Q9UHV2 236 aa6.19□□□□□ -1.42
VPS13B-208ENST00000521037 PRR12Q9ULL5 1215 aa6.19□□□□□ -1.42
VPS13B-208ENST00000521037 SPATA31A5Q5VU36 1347 aa6.19□□□□□ -1.42
VPS13B-208ENST00000521037 NPHP3Q7Z494 1330 aa6.19□□□□□ -1.42
VPS13B-208ENST00000521037 SPATA31A7Q8IWB4 1347 aa6.19□□□□□ -1.42
VPS13B-208ENST00000521037 ADGRB2O60241 1585 aa6.18□□□□□ -1.42
VPS13B-208ENST00000521037 CDC42BPGQ6DT37 1551 aa6.18□□□□□ -1.42
VPS13B-208ENST00000521037 MYOM3Q5VTT5 1437 aa6.18□□□□□ -1.42
VPS13B-208ENST00000521037 E9PCH4 1651 aa6.18□□□□□ -1.42
VPS13B-208ENST00000521037 NEUROD2Q15784 382 aa6.18□□□□□ -1.42
VPS13B-208ENST00000521037 LCE3BQ5TA77 95 aa6.18□□□□□ -1.42
VPS13B-208ENST00000521037 C20orf204Q6ZNR8 217 aa6.18□□□□□ -1.42
VPS13B-208ENST00000521037 MICALL1Q8N3F8 863 aa6.18□□□□□ -1.42
VPS13B-208ENST00000521037 PLPP7Q8NBV4 271 aa6.18□□□□□ -1.42
VPS13B-208ENST00000521037 TNFRSF25Q93038 417 aa6.18□□□□□ -1.42
VPS13B-208ENST00000521037 NEXMIFQ5QGS0 1516 aa6.18□□□□□ -1.42
VPS13B-208ENST00000521037 MAP3K5Q99683 1374 aa6.18□□□□□ -1.42
VPS13B-208ENST00000521037 EML1O00423 815 aa6.17□□□□□ -1.42
VPS13B-208ENST00000521037 NID1P14543 1247 aa6.17□□□□□ -1.42
VPS13B-208ENST00000521037 TATP17735 454 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-208ENST00000521037 VAC14Q08AM6 782 aa6.17□□□□□ -1.42
VPS13B-208ENST00000521037 C8orf86Q6ZUL3 223 aa6.17□□□□□ -1.42
VPS13B-208ENST00000521037 PTF1AQ7RTS3 328 aa6.17□□□□□ -1.42
VPS13B-208ENST00000521037 SLC30A3Q99726 388 aa6.17□□□□□ -1.42
VPS13B-208ENST00000521037 SCHIP1Q9P0W5 487 aaPredicted RBP6.17□□□□□ -1.42
VPS13B-208ENST00000521037 PARP3Q9Y6F1 533 aa6.17□□□□□ -1.42
VPS13B-208ENST00000521037 DAPK1P53355 1430 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 PEAK1Q9H792 1746 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 FAM229AH3BQW9 127 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 M0R082 166 aa6.16□□□□□ -1.42
VPS13B-208ENST00000521037 APBA3O96018 575 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms