RNA–Protein interactions for RNA: ENST00000520913.1

PVT1-209, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 584 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-209ENST00000520913 COA1Q9GZY4 146 aa13.6□□□□□ -0.23
PVT1-209ENST00000520913 ZNF408Q9H9D4 720 aa13.6□□□□□ -0.23
PVT1-209ENST00000520913 GGA3Q9NZ52 723 aa13.6□□□□□ -0.23
PVT1-209ENST00000520913 C9orf78Q9NZ63 289 aaPredicted RBP13.6□□□□□ -0.23
PVT1-209ENST00000520913 PTPRCP08575 1304 aa13.6□□□□□ -0.23
PVT1-209ENST00000520913 CCER2I3L3R5 266 aa13.59□□□□□ -0.23
PVT1-209ENST00000520913 KCNJ4P48050 445 aa13.59□□□□□ -0.23
PVT1-209ENST00000520913 ZNF280AP59817 542 aaPredicted RBP13.59□□□□□ -0.23
PVT1-209ENST00000520913 CHRNDQ07001 517 aa13.59□□□□□ -0.23
PVT1-209ENST00000520913 KRT26Q7Z3Y9 468 aa13.59□□□□□ -0.23
PVT1-209ENST00000520913 SAPCD2Q86UD0 394 aa13.59□□□□□ -0.23
PVT1-209ENST00000520913 HHIPL1Q96JK4 782 aa13.59□□□□□ -0.23
PVT1-209ENST00000520913 CAPNS2Q96L46 248 aa13.59□□□□□ -0.23
PVT1-209ENST00000520913 WTIPA6NIX2 430 aaPredicted RBP13.58□□□□□ -0.24
PVT1-209ENST00000520913 FOXN1O15353 648 aa13.58□□□□□ -0.24
PVT1-209ENST00000520913 MAP2K1Q02750 393 aaPredicted RBP13.58□□□□□ -0.24
PVT1-209ENST00000520913 SLFN5Q08AF3 891 aa13.58□□□□□ -0.24
PVT1-209ENST00000520913 CCDC57Q2TAC2 916 aa13.58□□□□□ -0.24
PVT1-209ENST00000520913 TAF7LQ5H9L4 462 aa13.58□□□□□ -0.24
PVT1-209ENST00000520913 RBM26Q5T8P6 1007 aaKnown RBP13.58□□□□□ -0.24
PVT1-209ENST00000520913 CYP4F22Q6NT55 531 aa13.58□□□□□ -0.24
PVT1-209ENST00000520913 LMBR1LQ6UX01 489 aa13.58□□□□□ -0.24
PVT1-209ENST00000520913 USP48Q86UV5 1035 aa13.58□□□□□ -0.24
PVT1-209ENST00000520913 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
PVT1-209ENST00000520913 FBXW7Q969H0 707 aa13.58□□□□□ -0.24
PVT1-209ENST00000520913 GMLQ99445 158 aa13.58□□□□□ -0.24
PVT1-209ENST00000520913 ADM5C9JUS6 153 aa13.57□□□□□ -0.24
PVT1-209ENST00000520913 USP17L8P0C7I0 530 aa13.57□□□□□ -0.24
PVT1-209ENST00000520913 GRM1Q13255 1194 aa13.57□□□□□ -0.24
PVT1-209ENST00000520913 EPHA10Q5JZY3 1008 aa13.57□□□□□ -0.24
PVT1-209ENST00000520913 DACT2Q5SW24 774 aa13.57□□□□□ -0.24
PVT1-209ENST00000520913 STRIP1Q5VSL9 837 aa13.57□□□□□ -0.24
PVT1-209ENST00000520913 SULF1Q8IWU6 871 aa13.57□□□□□ -0.24
PVT1-209ENST00000520913 MYOZ2Q9NPC6 264 aa13.57□□□□□ -0.24
PVT1-209ENST00000520913 WBP1LQ9NX94 342 aa13.57□□□□□ -0.24
PVT1-209ENST00000520913 LAMB1P07942 1786 aa13.57□□□□□ -0.24
PVT1-209ENST00000520913 PITPNM2Q9BZ72 1349 aa13.57□□□□□ -0.24
PVT1-209ENST00000520913 KLRK1P26718 216 aa13.56□□□□□ -0.24
PVT1-209ENST00000520913 CTCFP49711 727 aaPredicted RBP13.56□□□□□ -0.24
PVT1-209ENST00000520913 ALDH1L2Q3SY69 923 aa13.56□□□□□ -0.24
PVT1-209ENST00000520913 TXNRD3Q86VQ6 643 aa13.56□□□□□ -0.24
PVT1-209ENST00000520913 TNS4Q8IZW8 715 aa13.56□□□□□ -0.24
PVT1-209ENST00000520913 UTYO14607 1347 aa13.56□□□□□ -0.24
PVT1-209ENST00000520913 MMP14P50281 582 aa13.55□□□□□ -0.24
PVT1-209ENST00000520913 ANGEL2Q5VTE6 544 aaKnown RBP13.55□□□□□ -0.24
PVT1-209ENST00000520913 LDHAL6AQ6ZMR3 332 aa13.55□□□□□ -0.24
PVT1-209ENST00000520913 C15orf52Q6ZUT6 534 aaKnown RBP13.55□□□□□ -0.24
PVT1-209ENST00000520913 ZNF804AQ7Z570 1209 aa13.55□□□□□ -0.24
PVT1-209ENST00000520913 OGFOD1Q8N543 542 aa13.55□□□□□ -0.24
PVT1-209ENST00000520913 SSH1Q8WYL5 1049 aa13.55□□□□□ -0.24
PVT1-209ENST00000520913 SUCLG2Q96I99 432 aa13.55□□□□□ -0.24
PVT1-209ENST00000520913 PRDM10Q9NQV6 1147 aa13.55□□□□□ -0.24
PVT1-209ENST00000520913 CNNM1Q9NRU3 951 aa13.55□□□□□ -0.24
PVT1-209ENST00000520913 IRS2Q9Y4H2 1338 aa13.55□□□□□ -0.24
PVT1-209ENST00000520913 COL1A1P02452 1464 aaPredicted RBP13.55□□□□□ -0.24
PVT1-209ENST00000520913 TAF5LO75529 589 aa13.54□□□□□ -0.24
PVT1-209ENST00000520913 CT47B1P0C2W7 299 aaPredicted RBP13.54□□□□□ -0.24
PVT1-209ENST00000520913 NBPF7P0C2Y1 421 aaPredicted RBP13.54□□□□□ -0.24
PVT1-209ENST00000520913 MAP2K2P36507 400 aa13.54□□□□□ -0.24
PVT1-209ENST00000520913 HUNKP57058 714 aa13.54□□□□□ -0.24
PVT1-209ENST00000520913 SCARF1Q14162 830 aa13.54□□□□□ -0.24
PVT1-209ENST00000520913 ZNF594Q96JF6 807 aaPredicted RBP13.54□□□□□ -0.24
PVT1-209ENST00000520913 BEGAINQ9BUH8 593 aa13.54□□□□□ -0.24
PVT1-209ENST00000520913 GBA2Q9HCG7 927 aaPredicted RBP13.54□□□□□ -0.24
PVT1-209ENST00000520913 SMC4Q9NTJ3 1288 aa13.54□□□□□ -0.24
PVT1-209ENST00000520913 ASTN2O75129 1339 aaPredicted RBP13.54□□□□□ -0.24
PVT1-209ENST00000520913 TTLL5Q6EMB2 1281 aa13.53□□□□□ -0.24
PVT1-209ENST00000520913 C2orf69Q8N8R5 385 aa13.53□□□□□ -0.24
PVT1-209ENST00000520913 HELBQ8NG08 1087 aaPredicted RBP13.53□□□□□ -0.24
PVT1-209ENST00000520913 CDCA5Q96FF9 252 aa13.53□□□□□ -0.24
PVT1-209ENST00000520913 CDCA7LQ96GN5 454 aa13.53□□□□□ -0.24
PVT1-209ENST00000520913 MXD3Q9BW11 206 aa13.53□□□□□ -0.24
PVT1-209ENST00000520913 BICC1Q9H694 974 aaKnown RBP13.53□□□□□ -0.24
PVT1-209ENST00000520913 CD209Q9NNX6 404 aa13.53□□□□□ -0.24
PVT1-209ENST00000520913 HDAC9Q9UKV0 1011 aa13.53□□□□□ -0.24
PVT1-209ENST00000520913 OTOFQ9HC10 1997 aa13.52□□□□□ -0.24
PVT1-209ENST00000520913 SNAP23O00161 211 aa13.52□□□□□ -0.25
PVT1-209ENST00000520913 AOC2O75106 756 aa13.52□□□□□ -0.25
PVT1-209ENST00000520913 HSPA8P11142 646 aaKnown RBP13.52□□□□□ -0.25
PVT1-209ENST00000520913 BRPF1P55201 1214 aaPredicted RBP13.52□□□□□ -0.25
PVT1-209ENST00000520913 GTF2IP78347 998 aa13.52□□□□□ -0.25
PVT1-209ENST00000520913 RABL6Q3YEC7 729 aaPredicted RBP13.52□□□□□ -0.25
PVT1-209ENST00000520913 DLK2Q6UY11 383 aa13.52□□□□□ -0.25
PVT1-209ENST00000520913 TRMT2AQ8IZ69 625 aaKnown RBP13.52□□□□□ -0.25
PVT1-209ENST00000520913 KAZALD1Q96I82 304 aa13.52□□□□□ -0.25
PVT1-209ENST00000520913 CASP8AP2Q9UKL3 1982 aa13.51□□□□□ -0.25
PVT1-209ENST00000520913 WNT10BO00744 389 aa13.51□□□□□ -0.25
PVT1-209ENST00000520913 PLIN1O60240 522 aa13.51□□□□□ -0.25
PVT1-209ENST00000520913 IL1R1P14778 569 aa13.51□□□□□ -0.25
PVT1-209ENST00000520913 LBX1P52954 281 aa13.51□□□□□ -0.25
PVT1-209ENST00000520913 NOGQ13253 232 aa13.51□□□□□ -0.25
PVT1-209ENST00000520913 RGMBQ6NW40 437 aa13.51□□□□□ -0.25
PVT1-209ENST00000520913 KIAA0825Q8IV33 1275 aa13.51□□□□□ -0.25
PVT1-209ENST00000520913 MROH5Q6ZUA9 1318 aa13.5□□□□□ -0.25
PVT1-209ENST00000520913 CA12O43570 354 aa13.5□□□□□ -0.25
PVT1-209ENST00000520913 SASH1O94885 1247 aa13.5□□□□□ -0.25
PVT1-209ENST00000520913 FKBP1AP62942 108 aaKnown RBP13.5□□□□□ -0.25
PVT1-209ENST00000520913 FKBP1BP68106 108 aa13.5□□□□□ -0.25
PVT1-209ENST00000520913 UBE4AQ14139 1066 aa13.5□□□□□ -0.25
PVT1-209ENST00000520913 NBPF9Q3BBW0 867 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms