RNA–Protein interactions for RNA: ENST00000520860.1

SRGAP3-212, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 5

Gene SRGAP3, Length 422 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-212ENST00000520860 FBXW7Q969H0 707 aa17.13■□□□□ 0.33
SRGAP3-212ENST00000520860 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.13■□□□□ 0.33
SRGAP3-212ENST00000520860 MYO3BQ8WXR4 1341 aa17.13■□□□□ 0.33
SRGAP3-212ENST00000520860 SASH1O94885 1247 aa17.12■□□□□ 0.33
SRGAP3-212ENST00000520860 ZBTB48P10074 688 aaPredicted RBP17.12■□□□□ 0.33
SRGAP3-212ENST00000520860 RIPK4P57078 832 aa17.12■□□□□ 0.33
SRGAP3-212ENST00000520860 TRIM28Q13263 835 aaKnown RBP17.12■□□□□ 0.33
SRGAP3-212ENST00000520860 OTUD7BQ6GQQ9 843 aa17.12■□□□□ 0.33
SRGAP3-212ENST00000520860 MKI67P46013 3256 aaKnown RBP17.11■□□□□ 0.33
SRGAP3-212ENST00000520860 IGF2BP3O00425 579 aaKnown RBP eCLIP17.11■□□□□ 0.33
SRGAP3-212ENST00000520860 MMP14P50281 582 aa17.11■□□□□ 0.33
SRGAP3-212ENST00000520860 LMOD3Q0VAK6 560 aa17.11■□□□□ 0.33
SRGAP3-212ENST00000520860 DACT2Q5SW24 774 aa17.11■□□□□ 0.33
SRGAP3-212ENST00000520860 HDGFL1Q5TGJ6 251 aa17.11■□□□□ 0.33
SRGAP3-212ENST00000520860 ANKRD18AQ8IVF6 992 aa17.11■□□□□ 0.33
SRGAP3-212ENST00000520860 ZBTB38Q8NAP3 1195 aaPredicted RBP17.11■□□□□ 0.33
SRGAP3-212ENST00000520860 KRT24Q2M2I5 525 aa17.1■□□□□ 0.33
SRGAP3-212ENST00000520860 WNK4Q96J92 1243 aa17.1■□□□□ 0.33
SRGAP3-212ENST00000520860 MXD3Q9BW11 206 aa17.1■□□□□ 0.33
SRGAP3-212ENST00000520860 DBF4Q9UBU7 674 aaPredicted RBP17.1■□□□□ 0.33
SRGAP3-212ENST00000520860 H0YGN5 161 aa17.09■□□□□ 0.33
SRGAP3-212ENST00000520860 DLL1O00548 723 aa17.09■□□□□ 0.33
SRGAP3-212ENST00000520860 SP3Q02447 781 aa17.09■□□□□ 0.33
SRGAP3-212ENST00000520860 CRHR2Q13324 411 aa17.09■□□□□ 0.33
SRGAP3-212ENST00000520860 STRIP1Q5VSL9 837 aa17.09■□□□□ 0.33
SRGAP3-212ENST00000520860 ZNF333Q96JL9 665 aa17.09■□□□□ 0.33
SRGAP3-212ENST00000520860 CCDC85AQ96PX6 553 aaPredicted RBP17.09■□□□□ 0.33
SRGAP3-212ENST00000520860 HYPKQ9NX55 129 aa17.09■□□□□ 0.33
SRGAP3-212ENST00000520860 MED23Q9ULK4 1368 aa17.09■□□□□ 0.33
SRGAP3-212ENST00000520860 COL1A1P02452 1464 aaPredicted RBP17.08■□□□□ 0.32
SRGAP3-212ENST00000520860 PPP1R12BO60237 982 aaPredicted RBP17.08■□□□□ 0.32
SRGAP3-212ENST00000520860 PDE8AO60658 829 aa17.08■□□□□ 0.32
SRGAP3-212ENST00000520860 SLC4A8Q2Y0W8 1093 aa17.08■□□□□ 0.32
SRGAP3-212ENST00000520860 NBPF11Q86T75 865 aa17.08■□□□□ 0.32
SRGAP3-212ENST00000520860 FZD1Q9UP38 647 aa17.08■□□□□ 0.32
SRGAP3-212ENST00000520860 HTTP42858 3142 aa17.07■□□□□ 0.32
SRGAP3-212ENST00000520860 ARHGEF6Q15052 776 aa17.07■□□□□ 0.32
SRGAP3-212ENST00000520860 MAP3K11Q16584 847 aa17.07■□□□□ 0.32
SRGAP3-212ENST00000520860 SLC9C1Q4G0N8 1177 aa17.07■□□□□ 0.32
SRGAP3-212ENST00000520860 RIC3Q7Z5B4 369 aa17.07■□□□□ 0.32
SRGAP3-212ENST00000520860 CLMNQ96JQ2 1002 aa17.07■□□□□ 0.32
SRGAP3-212ENST00000520860 COA1Q9GZY4 146 aa17.07■□□□□ 0.32
SRGAP3-212ENST00000520860 DEFB129Q9H1M3 183 aa17.07■□□□□ 0.32
SRGAP3-212ENST00000520860 UNCXA6NJT0 531 aa17.06■□□□□ 0.32
SRGAP3-212ENST00000520860 HOXB7P09629 217 aa17.06■□□□□ 0.32
SRGAP3-212ENST00000520860 GOLGA2Q08379 1002 aa17.06■□□□□ 0.32
SRGAP3-212ENST00000520860 KIAA0825Q8IV33 1275 aa17.06■□□□□ 0.32
SRGAP3-212ENST00000520860 OTUD5Q96G74 571 aa17.06■□□□□ 0.32
SRGAP3-212ENST00000520860 CDC5LQ99459 802 aaKnown RBP17.06■□□□□ 0.32
SRGAP3-212ENST00000520860 LAS1LQ9Y4W2 734 aaKnown RBP17.06■□□□□ 0.32
SRGAP3-212ENST00000520860 CHL1O00533 1208 aa17.05■□□□□ 0.32
SRGAP3-212ENST00000520860 PCCAP05165 728 aaPredicted RBP17.05■□□□□ 0.32
SRGAP3-212ENST00000520860 CHRDL2Q6WN34 429 aa17.05■□□□□ 0.32
SRGAP3-212ENST00000520860 SLC17A8Q8NDX2 589 aa17.05■□□□□ 0.32
SRGAP3-212ENST00000520860 TMPOP42166 694 aaKnown RBP17.04■□□□□ 0.32
SRGAP3-212ENST00000520860 TTLL5Q6EMB2 1281 aa17.04■□□□□ 0.32
SRGAP3-212ENST00000520860 PPP2R3BQ9Y5P8 575 aa17.04■□□□□ 0.32
SRGAP3-212ENST00000520860 PTCH2Q9Y6C5 1203 aa17.04■□□□□ 0.32
SRGAP3-212ENST00000520860 WTIPA6NIX2 430 aaPredicted RBP17.03■□□□□ 0.32
SRGAP3-212ENST00000520860 CCT4P50991 539 aaKnown RBP17.03■□□□□ 0.32
SRGAP3-212ENST00000520860 DLGAP5Q15398 846 aa17.03■□□□□ 0.32
SRGAP3-212ENST00000520860 SUPT20HL1Q3ZLR7 823 aa17.03■□□□□ 0.32
SRGAP3-212ENST00000520860 CCDC191Q8NCU4 936 aa17.03■□□□□ 0.32
SRGAP3-212ENST00000520860 ZBED3Q96IU2 234 aaPredicted RBP17.03■□□□□ 0.32
SRGAP3-212ENST00000520860 MYD88Q99836 296 aa17.03■□□□□ 0.32
SRGAP3-212ENST00000520860 LAMB1P07942 1786 aa17.02■□□□□ 0.32
SRGAP3-212ENST00000520860 MYCP01106 439 aaPredicted RBP17.02■□□□□ 0.32
SRGAP3-212ENST00000520860 IREB2P48200 963 aaKnown RBP17.02■□□□□ 0.32
SRGAP3-212ENST00000520860 CAP1Q01518 475 aa17.02■□□□□ 0.32
SRGAP3-212ENST00000520860 JARID2Q92833 1246 aaPredicted RBP17.02■□□□□ 0.32
SRGAP3-212ENST00000520860 BSDC1Q9NW68 430 aaPredicted RBP17.02■□□□□ 0.32
SRGAP3-212ENST00000520860 CWC25Q9NXE8 425 aaPredicted RBP17.02■□□□□ 0.32
SRGAP3-212ENST00000520860 MINPP1Q9UNW1 487 aa17.02■□□□□ 0.32
SRGAP3-212ENST00000520860 ZNF646O15015 1829 aaPredicted RBP17.01■□□□□ 0.31
SRGAP3-212ENST00000520860 PTPN18Q99952 460 aa17.01■□□□□ 0.31
SRGAP3-212ENST00000520860 SSC5DA1L4H1 1573 aa17.01■□□□□ 0.31
SRGAP3-212ENST00000520860 TESPA1A2RU30 521 aaPredicted RBP17■□□□□ 0.31
SRGAP3-212ENST00000520860 MYO1BO43795 1136 aa17■□□□□ 0.31
SRGAP3-212ENST00000520860 GJA5P36382 358 aa17■□□□□ 0.31
SRGAP3-212ENST00000520860 CTSWP56202 376 aa17■□□□□ 0.31
SRGAP3-212ENST00000520860 GTF2IP78347 998 aa17■□□□□ 0.31
SRGAP3-212ENST00000520860 NEUROD2Q15784 382 aa17■□□□□ 0.31
SRGAP3-212ENST00000520860 TXNRD3Q86VQ6 643 aa17■□□□□ 0.31
SRGAP3-212ENST00000520860 ANKRD13AQ8IZ07 590 aa17■□□□□ 0.31
SRGAP3-212ENST00000520860 DPF3Q92784 378 aa17■□□□□ 0.31
SRGAP3-212ENST00000520860 RBM27Q9P2N5 1060 aaKnown RBP17■□□□□ 0.31
SRGAP3-212ENST00000520860 LEMD3Q9Y2U8 911 aa17■□□□□ 0.31
SRGAP3-212ENST00000520860 TAF1CQ15572 869 aaPredicted RBP16.99■□□□□ 0.31
SRGAP3-212ENST00000520860 DUSP27Q5VZP5 1158 aa16.99■□□□□ 0.31
SRGAP3-212ENST00000520860 ZFYVE28Q9HCC9 887 aa16.99■□□□□ 0.31
SRGAP3-212ENST00000520860 CUL9Q8IWT3 2517 aa16.99■□□□□ 0.31
SRGAP3-212ENST00000520860 ZNF804BA4D1E1 1349 aa16.98■□□□□ 0.31
SRGAP3-212ENST00000520860 CENPFP49454 3210 aa16.98■□□□□ 0.31
SRGAP3-212ENST00000520860 CLRN2A0PK11 232 aa16.97■□□□□ 0.31
SRGAP3-212ENST00000520860 USP2O75604 605 aaPredicted RBP16.97■□□□□ 0.31
SRGAP3-212ENST00000520860 WDHD1O75717 1129 aaPredicted RBP16.97■□□□□ 0.31
SRGAP3-212ENST00000520860 NBPF12Q5TAG4 269 aaPredicted RBP16.97■□□□□ 0.31
SRGAP3-212ENST00000520860 MTMR14Q8NCE2 650 aa16.97■□□□□ 0.31
SRGAP3-212ENST00000520860 SH3TC2Q8TF17 1288 aa16.97■□□□□ 0.31
SRGAP3-212ENST00000520860 OPTNQ96CV9 577 aa16.97■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms