RNA–Protein interactions for RNA: ENST00000520752.1

SHPRH-208, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 4

Gene SHPRH, Length 821 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-208ENST00000520752 E9PCH4 1651 aa10.34□□□□□ -0.75
SHPRH-208ENST00000520752 KIF27Q86VH2 1401 aa10.33□□□□□ -0.76
SHPRH-208ENST00000520752 SENP3-EIF4A1A0A087X0R7 540 aa10.33□□□□□ -0.76
SHPRH-208ENST00000520752 SOBPA7XYQ1 873 aa10.33□□□□□ -0.76
SHPRH-208ENST00000520752 MBD3O95983 291 aa10.33□□□□□ -0.76
SHPRH-208ENST00000520752 SNRPBP14678 240 aaKnown RBP10.33□□□□□ -0.76
SHPRH-208ENST00000520752 RABEP1Q15276 862 aa10.33□□□□□ -0.76
SHPRH-208ENST00000520752 ZKSCAN8Q15776 578 aaPredicted RBP10.33□□□□□ -0.76
SHPRH-208ENST00000520752 CAVIN1Q6NZI2 390 aaKnown RBP10.33□□□□□ -0.76
SHPRH-208ENST00000520752 KIF18AQ8NI77 898 aa10.33□□□□□ -0.76
SHPRH-208ENST00000520752 TACO1Q9BSH4 297 aaKnown RBP10.33□□□□□ -0.76
SHPRH-208ENST00000520752 PHACTR1Q9C0D0 580 aa10.33□□□□□ -0.76
SHPRH-208ENST00000520752 QTRT2Q9H974 415 aaKnown RBP10.33□□□□□ -0.76
SHPRH-208ENST00000520752 GPC6Q9Y625 555 aaPredicted RBP10.33□□□□□ -0.76
SHPRH-208ENST00000520752 AQRO60306 1485 aaKnown RBP eCLIP10.33□□□□□ -0.76
SHPRH-208ENST00000520752 CAMSAP2Q08AD1 1489 aa10.33□□□□□ -0.76
SHPRH-208ENST00000520752 TEX14Q8IWB6 1497 aa10.33□□□□□ -0.76
SHPRH-208ENST00000520752 FGD6Q6ZV73 1430 aa10.33□□□□□ -0.76
SHPRH-208ENST00000520752 A0A1B0GUL7 405 aa10.32□□□□□ -0.76
SHPRH-208ENST00000520752 BAG4O95429 457 aaKnown RBP10.32□□□□□ -0.76
SHPRH-208ENST00000520752 TATP17735 454 aaPredicted RBP10.32□□□□□ -0.76
SHPRH-208ENST00000520752 MSX1P28360 303 aa10.32□□□□□ -0.76
SHPRH-208ENST00000520752 PTSQ03393 145 aa10.32□□□□□ -0.76
SHPRH-208ENST00000520752 RAD51AP2Q09MP3 1159 aa10.32□□□□□ -0.76
SHPRH-208ENST00000520752 RTN1Q16799 776 aa10.32□□□□□ -0.76
SHPRH-208ENST00000520752 TEX35Q5T0J7 233 aa10.32□□□□□ -0.76
SHPRH-208ENST00000520752 C16orf46Q6P387 395 aa10.32□□□□□ -0.76
SHPRH-208ENST00000520752 ZNF397Q8NF99 534 aaPredicted RBP10.32□□□□□ -0.76
SHPRH-208ENST00000520752 EGFL7Q9UHF1 273 aa10.32□□□□□ -0.76
SHPRH-208ENST00000520752 PAXBP1Q9Y5B6 917 aa10.32□□□□□ -0.76
SHPRH-208ENST00000520752 CC2D2AQ9P2K1 1620 aa10.32□□□□□ -0.76
SHPRH-208ENST00000520752 BIVM-ERCC5R4GMW8 1640 aa10.32□□□□□ -0.76
SHPRH-208ENST00000520752 EPRSP07814 1512 aaKnown RBP10.32□□□□□ -0.76
SHPRH-208ENST00000520752 ZBTB7CA1YPR0 619 aa10.31□□□□□ -0.76
SHPRH-208ENST00000520752 SLC35F4A4IF30 521 aa10.31□□□□□ -0.76
SHPRH-208ENST00000520752 SMTNL1A8MU46 457 aa10.31□□□□□ -0.76
SHPRH-208ENST00000520752 GOLIM4O00461 696 aa10.31□□□□□ -0.76
SHPRH-208ENST00000520752 F11P03951 625 aa10.31□□□□□ -0.76
SHPRH-208ENST00000520752 ATP4AP20648 1035 aa10.31□□□□□ -0.76
SHPRH-208ENST00000520752 GSCP56915 257 aaPredicted RBP10.31□□□□□ -0.76
SHPRH-208ENST00000520752 NAA30Q147X3 362 aaPredicted RBP10.31□□□□□ -0.76
SHPRH-208ENST00000520752 CT47A1Q5JQC4 288 aaPredicted RBP10.31□□□□□ -0.76
SHPRH-208ENST00000520752 COX20Q5RI15 118 aa10.31□□□□□ -0.76
SHPRH-208ENST00000520752 SUGP1Q8IWZ8 645 aaKnown RBP10.31□□□□□ -0.76
SHPRH-208ENST00000520752 GTF3C2Q8WUA4 911 aaPredicted RBP10.31□□□□□ -0.76
SHPRH-208ENST00000520752 SYAP1Q96A49 352 aaPredicted RBP10.31□□□□□ -0.76
SHPRH-208ENST00000520752 DEF6Q9H4E7 631 aa10.31□□□□□ -0.76
SHPRH-208ENST00000520752 IVNS1ABPQ9Y6Y0 642 aa10.31□□□□□ -0.76
SHPRH-208ENST00000520752 V9GYY5 206 aaPredicted RBP10.31□□□□□ -0.76
SHPRH-208ENST00000520752 POTECB2RU33 542 aa10.3□□□□□ -0.76
SHPRH-208ENST00000520752 ZNF853P0CG23 659 aa10.3□□□□□ -0.76
SHPRH-208ENST00000520752 HNRNPH2P55795 449 aaKnown RBP10.3□□□□□ -0.76
SHPRH-208ENST00000520752 GPS2Q13227 327 aa10.3□□□□□ -0.76
SHPRH-208ENST00000520752 NGLY1Q96IV0 654 aa10.3□□□□□ -0.76
SHPRH-208ENST00000520752 SAP130Q9H0E3 1048 aa10.3□□□□□ -0.76
SHPRH-208ENST00000520752 SMARCA4P51532 1647 aa10.29□□□□□ -0.76
SHPRH-208ENST00000520752 CCDC196A0A1B0GTZ2 297 aa10.29□□□□□ -0.76
SHPRH-208ENST00000520752 PPP1R12AO14974 1030 aaPredicted RBP10.29□□□□□ -0.76
SHPRH-208ENST00000520752 IGSF3O75054 1194 aa10.29□□□□□ -0.76
SHPRH-208ENST00000520752 TDO2P48775 406 aa10.29□□□□□ -0.76
SHPRH-208ENST00000520752 NCBP1Q09161 790 aaKnown RBP10.29□□□□□ -0.76
SHPRH-208ENST00000520752 KIF1BPQ96EK5 621 aa10.29□□□□□ -0.76
SHPRH-208ENST00000520752 LRFN2Q9ULH4 789 aa10.29□□□□□ -0.76
SHPRH-208ENST00000520752 GAPVD1Q14C86 1478 aa10.29□□□□□ -0.76
SHPRH-208ENST00000520752 SCAF11Q99590 1463 aaKnown RBP10.29□□□□□ -0.76
SHPRH-208ENST00000520752 KANK1Q14678 1352 aa10.28□□□□□ -0.76
SHPRH-208ENST00000520752 BCORL1Q5H9F3 1711 aa10.28□□□□□ -0.76
SHPRH-208ENST00000520752 KDM5CP41229 1560 aa10.28□□□□□ -0.76
SHPRH-208ENST00000520752 HTATSF1O43719 755 aaKnown RBP10.28□□□□□ -0.76
SHPRH-208ENST00000520752 SERPINB4P48594 390 aa10.28□□□□□ -0.76
SHPRH-208ENST00000520752 BMS1Q14692 1282 aaKnown RBP10.28□□□□□ -0.76
SHPRH-208ENST00000520752 DUSP27Q5VZP5 1158 aa10.28□□□□□ -0.76
SHPRH-208ENST00000520752 HELQQ8TDG4 1101 aa10.28□□□□□ -0.76
SHPRH-208ENST00000520752 ZIC5Q96T25 663 aa10.28□□□□□ -0.76
SHPRH-208ENST00000520752 NOL10Q9BSC4 688 aaKnown RBP10.28□□□□□ -0.76
SHPRH-208ENST00000520752 CRISPLD1Q9H336 500 aa10.28□□□□□ -0.76
SHPRH-208ENST00000520752 CWC22Q9HCG8 908 aaKnown RBP10.28□□□□□ -0.76
SHPRH-208ENST00000520752 TERF2IPQ9NYB0 399 aa10.28□□□□□ -0.76
SHPRH-208ENST00000520752 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.28□□□□□ -0.76
SHPRH-208ENST00000520752 DNMT3AQ9Y6K1 912 aaPredicted RBP10.28□□□□□ -0.76
SHPRH-208ENST00000520752 SHROOM2Q13796 1616 aa10.28□□□□□ -0.76
SHPRH-208ENST00000520752 KIF14Q15058 1648 aa10.28□□□□□ -0.76
SHPRH-208ENST00000520752 FYCO1Q9BQS8 1478 aa10.28□□□□□ -0.76
SHPRH-208ENST00000520752 PLXNC1O60486 1568 aa10.27□□□□□ -0.76
SHPRH-208ENST00000520752 ATP2B1P20020 1258 aa10.27□□□□□ -0.77
SHPRH-208ENST00000520752 TPM4P67936 248 aa10.27□□□□□ -0.77
SHPRH-208ENST00000520752 FKBP4Q02790 459 aaKnown RBP eCLIP10.27□□□□□ -0.77
SHPRH-208ENST00000520752 SF3B2Q13435 895 aaKnown RBP10.27□□□□□ -0.77
SHPRH-208ENST00000520752 C11orf91Q3C1V1 193 aa10.27□□□□□ -0.77
SHPRH-208ENST00000520752 NBPF6Q5VWK0 638 aa10.27□□□□□ -0.77
SHPRH-208ENST00000520752 NBPF5PQ86XG9 351 aaPredicted RBP10.27□□□□□ -0.77
SHPRH-208ENST00000520752 TRMT2AQ8IZ69 625 aaKnown RBP10.27□□□□□ -0.77
SHPRH-208ENST00000520752 CCDC155Q8N6L0 562 aa10.27□□□□□ -0.77
SHPRH-208ENST00000520752 IQUBQ8NA54 791 aa10.27□□□□□ -0.77
SHPRH-208ENST00000520752 RHPN1Q8TCX5 695 aa10.27□□□□□ -0.77
SHPRH-208ENST00000520752 NBPF4Q96M43 638 aa10.27□□□□□ -0.77
SHPRH-208ENST00000520752 FAM210AQ96ND0 272 aa10.27□□□□□ -0.77
SHPRH-208ENST00000520752 CEP89Q96ST8 783 aa10.27□□□□□ -0.77
SHPRH-208ENST00000520752 RWDD1Q9H446 243 aaPredicted RBP10.27□□□□□ -0.77
SHPRH-208ENST00000520752 CXorf56Q9H5V9 222 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms