RNA–Protein interactions for RNA: ENST00000520571.1

DENND3-213, Transcript of DENN domain containing 3, humanhuman

TSL 2

Gene DENND3, Length 590 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-213ENST00000520571 COA1Q9GZY4 146 aa17.25■□□□□ 0.35
DENND3-213ENST00000520571 ADARB2Q9NS39 739 aaKnown RBP17.25■□□□□ 0.35
DENND3-213ENST00000520571 APLP1P51693 650 aa17.24■□□□□ 0.35
DENND3-213ENST00000520571 USP50Q70EL3 339 aaPredicted RBP17.24■□□□□ 0.35
DENND3-213ENST00000520571 YTHDC1Q96MU7 727 aaKnown RBP17.24■□□□□ 0.35
DENND3-213ENST00000520571 RIPOR2Q9Y4F9 1068 aa17.24■□□□□ 0.35
DENND3-213ENST00000520571 MROH5Q6ZUA9 1318 aa17.23■□□□□ 0.35
DENND3-213ENST00000520571 A0A1B0GUL6 1792 aa17.23■□□□□ 0.35
DENND3-213ENST00000520571 USP17L3A6NCW0 530 aa17.23■□□□□ 0.35
DENND3-213ENST00000520571 USP17L4A6NCW7 530 aa17.23■□□□□ 0.35
DENND3-213ENST00000520571 VIL1P09327 827 aaKnown RBP17.23■□□□□ 0.35
DENND3-213ENST00000520571 RPS12P25398 132 aaKnown RBP17.23■□□□□ 0.35
DENND3-213ENST00000520571 HTRA3P83110 453 aa17.23■□□□□ 0.35
DENND3-213ENST00000520571 RBM26Q5T8P6 1007 aaKnown RBP17.23■□□□□ 0.35
DENND3-213ENST00000520571 USP17L1Q7RTZ2 530 aa17.23■□□□□ 0.35
DENND3-213ENST00000520571 DZIP1LQ8IYY4 767 aaKnown RBP17.23■□□□□ 0.35
DENND3-213ENST00000520571 DPF2Q92785 391 aa17.23■□□□□ 0.35
DENND3-213ENST00000520571 RSBN1LQ6PCB5 846 aaPredicted RBP17.22■□□□□ 0.35
DENND3-213ENST00000520571 SAMD7Q7Z3H4 446 aa17.22■□□□□ 0.35
DENND3-213ENST00000520571 ITPRIPQ8IWB1 547 aa17.22■□□□□ 0.35
DENND3-213ENST00000520571 CNTROBQ8N137 903 aa17.22■□□□□ 0.35
DENND3-213ENST00000520571 SIL1Q9H173 461 aa17.22■□□□□ 0.35
DENND3-213ENST00000520571 GNAI2P04899 355 aa17.21■□□□□ 0.35
DENND3-213ENST00000520571 RFX5P48382 616 aaPredicted RBP17.21■□□□□ 0.35
DENND3-213ENST00000520571 TBC1D10BQ4KMP7 808 aaPredicted RBP17.21■□□□□ 0.35
DENND3-213ENST00000520571 ZNF804AQ7Z570 1209 aa17.21■□□□□ 0.35
DENND3-213ENST00000520571 TRPM4Q8TD43 1214 aa17.21■□□□□ 0.35
DENND3-213ENST00000520571 MXD3Q9BW11 206 aa17.21■□□□□ 0.35
DENND3-213ENST00000520571 RCAN3Q9UKA8 241 aa17.21■□□□□ 0.35
DENND3-213ENST00000520571 EYA2O00167 538 aa17.2■□□□□ 0.34
DENND3-213ENST00000520571 RLBP1P12271 317 aa17.2■□□□□ 0.34
DENND3-213ENST00000520571 GTF2IP78347 998 aa17.2■□□□□ 0.34
DENND3-213ENST00000520571 PTPN12Q05209 780 aaKnown RBP17.2■□□□□ 0.34
DENND3-213ENST00000520571 UBE4AQ14139 1066 aa17.2■□□□□ 0.34
DENND3-213ENST00000520571 TTLL5Q6EMB2 1281 aa17.2■□□□□ 0.34
DENND3-213ENST00000520571 CD209Q9NNX6 404 aa17.2■□□□□ 0.34
DENND3-213ENST00000520571 SRGAP3O43295 1099 aa17.19■□□□□ 0.34
DENND3-213ENST00000520571 USP17L8P0C7I0 530 aa17.19■□□□□ 0.34
DENND3-213ENST00000520571 GYG1P46976 350 aa17.19■□□□□ 0.34
DENND3-213ENST00000520571 HIRAP54198 1017 aaPredicted RBP17.19■□□□□ 0.34
DENND3-213ENST00000520571 DACT2Q5SW24 774 aa17.19■□□□□ 0.34
DENND3-213ENST00000520571 C15orf52Q6ZUT6 534 aaKnown RBP17.19■□□□□ 0.34
DENND3-213ENST00000520571 AGBL3Q8NEM8 1001 aa17.19■□□□□ 0.34
DENND3-213ENST00000520571 PANK1Q8TE04 598 aa17.19■□□□□ 0.34
DENND3-213ENST00000520571 JAG2Q9Y219 1238 aa17.19■□□□□ 0.34
DENND3-213ENST00000520571 PSME4Q14997 1843 aa17.19■□□□□ 0.34
DENND3-213ENST00000520571 ADAMTSL1Q8N6G6 1762 aa17.18■□□□□ 0.34
DENND3-213ENST00000520571 PDE8BO95263 885 aa17.18■□□□□ 0.34
DENND3-213ENST00000520571 ITGBL1O95965 494 aaPredicted RBP17.18■□□□□ 0.34
DENND3-213ENST00000520571 EGFRP00533 1210 aa17.18■□□□□ 0.34
DENND3-213ENST00000520571 STRIP1Q5VSL9 837 aa17.18■□□□□ 0.34
DENND3-213ENST00000520571 VPS37DQ86XT2 251 aa17.18■□□□□ 0.34
DENND3-213ENST00000520571 PA2G4Q9UQ80 394 aaKnown RBP17.18■□□□□ 0.34
DENND3-213ENST00000520571 IRS2Q9Y4H2 1338 aa17.18■□□□□ 0.34
DENND3-213ENST00000520571 HIBADHP31937 336 aaKnown RBP17.17■□□□□ 0.34
DENND3-213ENST00000520571 C1orf115Q9H7X2 142 aa17.17■□□□□ 0.34
DENND3-213ENST00000520571 PUM3Q15397 648 aaKnown RBP17.16■□□□□ 0.34
DENND3-213ENST00000520571 KIF4BQ2VIQ3 1234 aa17.16■□□□□ 0.34
DENND3-213ENST00000520571 ATG9AQ7Z3C6 839 aa17.16■□□□□ 0.34
DENND3-213ENST00000520571 OGFOD1Q8N543 542 aa17.16■□□□□ 0.34
DENND3-213ENST00000520571 VGLL2Q8N8G2 317 aa17.16■□□□□ 0.34
DENND3-213ENST00000520571 FAM84BQ96KN1 310 aaPredicted RBP17.16■□□□□ 0.34
DENND3-213ENST00000520571 GMLQ99445 158 aa17.16■□□□□ 0.34
DENND3-213ENST00000520571 TRAF5O00463 557 aa17.15■□□□□ 0.34
DENND3-213ENST00000520571 CIAO1O76071 339 aa17.15■□□□□ 0.34
DENND3-213ENST00000520571 IFIT1P09914 478 aaKnown RBP17.15■□□□□ 0.34
DENND3-213ENST00000520571 MS4A1P11836 297 aa17.15■□□□□ 0.34
DENND3-213ENST00000520571 IL1R1P14778 569 aa17.15■□□□□ 0.34
DENND3-213ENST00000520571 IL15P40933 162 aaPredicted RBP17.15■□□□□ 0.34
DENND3-213ENST00000520571 ZNF280AP59817 542 aaPredicted RBP17.15■□□□□ 0.34
DENND3-213ENST00000520571 CAVIN4Q5BKX8 364 aa17.15■□□□□ 0.34
DENND3-213ENST00000520571 KIAA0825Q8IV33 1275 aa17.15■□□□□ 0.34
DENND3-213ENST00000520571 ZC3H15Q8WU90 426 aaKnown RBP17.15■□□□□ 0.34
DENND3-213ENST00000520571 GLIS2Q9BZE0 524 aaPredicted RBP17.15■□□□□ 0.34
DENND3-213ENST00000520571 COPRSQ9NQ92 184 aa17.15■□□□□ 0.34
DENND3-213ENST00000520571 CEP126Q9P2H0 1117 aa17.15■□□□□ 0.34
DENND3-213ENST00000520571 IQSEC3Q9UPP2 1182 aaPredicted RBP17.15■□□□□ 0.34
DENND3-213ENST00000520571 MYO3BQ8WXR4 1341 aa17.15■□□□□ 0.34
DENND3-213ENST00000520571 PASKQ96RG2 1323 aa17.15■□□□□ 0.34
DENND3-213ENST00000520571 POLR2AP24928 1970 aaKnown RBP17.15■□□□□ 0.34
DENND3-213ENST00000520571 F8W031 263 aaPredicted RBP17.14■□□□□ 0.33
DENND3-213ENST00000520571 FRAT2O75474 233 aaPredicted RBP17.14■□□□□ 0.33
DENND3-213ENST00000520571 SLC5A1P13866 664 aa17.14■□□□□ 0.33
DENND3-213ENST00000520571 FMR1Q06787 632 aaKnown RBP eCLIP17.14■□□□□ 0.33
DENND3-213ENST00000520571 MYOZ2Q9NPC6 264 aa17.14■□□□□ 0.33
DENND3-213ENST00000520571 ZBTB7BO15156 539 aaPredicted RBP17.13■□□□□ 0.33
DENND3-213ENST00000520571 BCAMP50895 628 aa17.13■□□□□ 0.33
DENND3-213ENST00000520571 MTX1Q13505 466 aa17.13■□□□□ 0.33
DENND3-213ENST00000520571 SCARF1Q14162 830 aa17.13■□□□□ 0.33
DENND3-213ENST00000520571 USP48Q86UV5 1035 aa17.13■□□□□ 0.33
DENND3-213ENST00000520571 DCPSQ96C86 337 aaKnown RBP17.13■□□□□ 0.33
DENND3-213ENST00000520571 PGAP2Q9UHJ9 254 aa17.13■□□□□ 0.33
DENND3-213ENST00000520571 FBXO3Q9UK99 471 aa17.13■□□□□ 0.33
DENND3-213ENST00000520571 HDAC9Q9UKV0 1011 aa17.13■□□□□ 0.33
DENND3-213ENST00000520571 PCNTO95613 3336 aa17.13■□□□□ 0.33
DENND3-213ENST00000520571 PNMA6EA0A0J9YXQ4 647 aa17.12■□□□□ 0.33
DENND3-213ENST00000520571 TMEM88BA6NKF7 163 aa17.12■□□□□ 0.33
DENND3-213ENST00000520571 SASH1O94885 1247 aa17.12■□□□□ 0.33
DENND3-213ENST00000520571 CHAF1AQ13111 956 aaPredicted RBP17.12■□□□□ 0.33
DENND3-213ENST00000520571 ATP2B3Q16720 1220 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms