RNA–Protein interactions for RNA: ENST00000520228.1

SDCBP-208, Transcript of syndecan binding protein, human

TSL 2

Gene SDCBP, Length 564 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SDCBP-208	ENST00000520228	SHISA8	B8ZZ34	492 aa		11.22	□□□□□ -0.61
SDCBP-208	ENST00000520228		J3QW42	95 aa		11.22	□□□□□ -0.61
SDCBP-208	ENST00000520228	ARHGEF11	O15085	1522 aa		11.22	□□□□□ -0.61
SDCBP-208	ENST00000520228	POLR3D	P05423	398 aa	Predicted RBP	11.22	□□□□□ -0.61
SDCBP-208	ENST00000520228	TBC1D8B	Q0IIM8	1120 aa		11.22	□□□□□ -0.61
SDCBP-208	ENST00000520228	NUP160	Q12769	1436 aa		11.22	□□□□□ -0.61
SDCBP-208	ENST00000520228	CARMIL1	Q5VZK9	1371 aa		11.22	□□□□□ -0.61
SDCBP-208	ENST00000520228	ZNF385C	Q66K41	422 aa	Predicted RBP	11.22	□□□□□ -0.61
SDCBP-208	ENST00000520228	CYB5RL	Q6IPT4	315 aa		11.22	□□□□□ -0.61
SDCBP-208	ENST00000520228	CCDC74A	Q96AQ1	378 aa		11.22	□□□□□ -0.61
SDCBP-208	ENST00000520228	STARD13	Q9Y3M8	1113 aa		11.22	□□□□□ -0.61
SDCBP-208	ENST00000520228	CLASP1	Q7Z460	1538 aa		11.21	□□□□□ -0.61
SDCBP-208	ENST00000520228	TAGLN	Q01995	201 aa	Known RBP	11.21	□□□□□ -0.61
SDCBP-208	ENST00000520228	PEAR1	Q5VY43	1037 aa	Predicted RBP	11.21	□□□□□ -0.61
SDCBP-208	ENST00000520228	HFE2	Q6ZVN8	426 aa		11.21	□□□□□ -0.61
SDCBP-208	ENST00000520228	LDHB	P07195	334 aa	Known RBP	11.2	□□□□□ -0.62
SDCBP-208	ENST00000520228	FAM35A	Q86V20	835 aa		11.2	□□□□□ -0.62
SDCBP-208	ENST00000520228	NCAPG2	Q86XI2	1143 aa		11.2	□□□□□ -0.62
SDCBP-208	ENST00000520228	FBF1	Q8TES7	1133 aa		11.2	□□□□□ -0.62
SDCBP-208	ENST00000520228	EDN3	P14138	238 aa		11.19	□□□□□ -0.62
SDCBP-208	ENST00000520228	ALAS2	P22557	587 aa		11.19	□□□□□ -0.62
SDCBP-208	ENST00000520228	PERM1	Q5SV97	790 aa		11.19	□□□□□ -0.62
SDCBP-208	ENST00000520228	ALG1L	Q6GMV1	187 aa		11.19	□□□□□ -0.62
SDCBP-208	ENST00000520228	C20orf204	Q6ZNR8	217 aa		11.19	□□□□□ -0.62
SDCBP-208	ENST00000520228	BTBD6	Q96KE9	485 aa		11.19	□□□□□ -0.62
SDCBP-208	ENST00000520228	BCL2L13	Q9BXK5	485 aa		11.19	□□□□□ -0.62
SDCBP-208	ENST00000520228	NPHS2	Q9NP85	383 aa		11.19	□□□□□ -0.62
SDCBP-208	ENST00000520228	FRRS1L	Q9P0K9	344 aa		11.19	□□□□□ -0.62
SDCBP-208	ENST00000520228	RUSC2	Q8N2Y8	1516 aa		11.19	□□□□□ -0.62
SDCBP-208	ENST00000520228	RBM47	A0AV96	593 aa	Known RBP	11.18	□□□□□ -0.62
SDCBP-208	ENST00000520228	NFKBIE	O00221	500 aa		11.18	□□□□□ -0.62
SDCBP-208	ENST00000520228	PRPF40A	O75400	957 aa	Known RBP	11.18	□□□□□ -0.62
SDCBP-208	ENST00000520228	CPB1	P15086	417 aa		11.18	□□□□□ -0.62
SDCBP-208	ENST00000520228	ACPP	P15309	386 aa		11.18	□□□□□ -0.62
SDCBP-208	ENST00000520228	FOXD4L4	Q8WXT5	416 aa	Predicted RBP	11.18	□□□□□ -0.62
SDCBP-208	ENST00000520228	LPIN3	Q9BQK8	851 aa		11.18	□□□□□ -0.62
SDCBP-208	ENST00000520228	LATS2	Q9NRM7	1088 aa		11.18	□□□□□ -0.62
SDCBP-208	ENST00000520228	DZANK1	Q9NVP4	752 aa		11.18	□□□□□ -0.62
SDCBP-208	ENST00000520228	RIMBP3C	A6NJZ7	1639 aa		11.17	□□□□□ -0.62
SDCBP-208	ENST00000520228	RIMBP3B	A6NNM3	1639 aa		11.17	□□□□□ -0.62
SDCBP-208	ENST00000520228	RIMBP3	Q9UFD9	1639 aa		11.17	□□□□□ -0.62
SDCBP-208	ENST00000520228		A0A1W2PP55	124 aa		11.17	□□□□□ -0.62
SDCBP-208	ENST00000520228	ARHGEF15	O94989	841 aa		11.17	□□□□□ -0.62
SDCBP-208	ENST00000520228	IRS1	P35568	1242 aa		11.17	□□□□□ -0.62
SDCBP-208	ENST00000520228	ATP2B2	Q01814	1243 aa		11.17	□□□□□ -0.62
SDCBP-208	ENST00000520228	CHSY3	Q70JA7	882 aa		11.17	□□□□□ -0.62
SDCBP-208	ENST00000520228	EPS8L3	Q8TE67	593 aa	Known RBP	11.17	□□□□□ -0.62
SDCBP-208	ENST00000520228	CEP170	Q5SW79	1584 aa		11.16	□□□□□ -0.62
SDCBP-208	ENST00000520228	HOXB4	P17483	251 aa	Predicted RBP	11.16	□□□□□ -0.62
SDCBP-208	ENST00000520228	ATP11A	P98196	1134 aa		11.16	□□□□□ -0.62
SDCBP-208	ENST00000520228	KIAA0319	Q5VV43	1072 aa		11.16	□□□□□ -0.62
SDCBP-208	ENST00000520228	KANK3	Q6NY19	840 aa		11.16	□□□□□ -0.62
SDCBP-208	ENST00000520228	TTC9	Q92623	222 aa		11.16	□□□□□ -0.62
SDCBP-208	ENST00000520228	SPACA7	Q96KW9	195 aa		11.16	□□□□□ -0.62
SDCBP-208	ENST00000520228	ZKSCAN3	Q9BRR0	538 aa		11.16	□□□□□ -0.62
SDCBP-208	ENST00000520228	GHRH	P01286	108 aa		11.15	□□□□□ -0.62
SDCBP-208	ENST00000520228	ZNF16	P17020	682 aa	Predicted RBP	11.15	□□□□□ -0.62
SDCBP-208	ENST00000520228	EIF2AK2	P19525	551 aa	Known RBP	11.15	□□□□□ -0.62
SDCBP-208	ENST00000520228	FGD1	P98174	961 aa		11.15	□□□□□ -0.62
SDCBP-208	ENST00000520228	PSAPL1	Q6NUJ1	521 aa		11.15	□□□□□ -0.62
SDCBP-208	ENST00000520228	PI16	Q6UXB8	463 aa		11.15	□□□□□ -0.62
SDCBP-208	ENST00000520228	GIPC2	Q8TF65	315 aa		11.15	□□□□□ -0.62
SDCBP-208	ENST00000520228	PBX4	Q9BYU1	374 aa		11.15	□□□□□ -0.62
SDCBP-208	ENST00000520228	RASSF4	Q9H2L5	321 aa		11.15	□□□□□ -0.62
SDCBP-208	ENST00000520228	ARAP1	Q96P48	1450 aa		11.14	□□□□□ -0.63
SDCBP-208	ENST00000520228	ALB	P02768	609 aa		11.14	□□□□□ -0.63
SDCBP-208	ENST00000520228	LARP7	Q4G0J3	582 aa	Known RBP eCLIP	11.14	□□□□□ -0.63
SDCBP-208	ENST00000520228	MICALL1	Q8N3F8	863 aa		11.14	□□□□□ -0.63
SDCBP-208	ENST00000520228	SVOP	Q8N4V2	548 aa		11.14	□□□□□ -0.63
SDCBP-208	ENST00000520228	PLD4	Q96BZ4	506 aa		11.14	□□□□□ -0.63
SDCBP-208	ENST00000520228	OSMR	Q99650	979 aa		11.14	□□□□□ -0.63
SDCBP-208	ENST00000520228	RNF19A	Q9NV58	838 aa		11.14	□□□□□ -0.63
SDCBP-208	ENST00000520228	CUL7	Q14999	1698 aa		11.14	□□□□□ -0.63
SDCBP-208	ENST00000520228	GRIK5	Q16478	980 aa		11.13	□□□□□ -0.63
SDCBP-208	ENST00000520228	ELMSAN1	Q6PJG2	1045 aa		11.13	□□□□□ -0.63
SDCBP-208	ENST00000520228	TMEM102	Q8N9M5	508 aa	Predicted RBP	11.13	□□□□□ -0.63
SDCBP-208	ENST00000520228	DUSP9	Q99956	384 aa	Known RBP	11.13	□□□□□ -0.63
SDCBP-208	ENST00000520228	SMG9	Q9H0W8	520 aa	Known RBP	11.13	□□□□□ -0.63
SDCBP-208	ENST00000520228	RBSN	Q9H1K0	784 aa		11.13	□□□□□ -0.63
SDCBP-208	ENST00000520228	KIAA0586	Q9BVV6	1533 aa		11.13	□□□□□ -0.63
SDCBP-208	ENST00000520228	RAPGEF2	Q9Y4G8	1499 aa		11.12	□□□□□ -0.63
SDCBP-208	ENST00000520228	PRG4	Q92954	1404 aa	Predicted RBP	11.12	□□□□□ -0.63
SDCBP-208	ENST00000520228	TRPA1	O75762	1119 aa		11.12	□□□□□ -0.63
SDCBP-208	ENST00000520228	MAP3K10	Q02779	954 aa		11.12	□□□□□ -0.63
SDCBP-208	ENST00000520228	ZSCAN1	Q8NBB4	408 aa		11.12	□□□□□ -0.63
SDCBP-208	ENST00000520228	GLIS3	Q8NEA6	775 aa		11.12	□□□□□ -0.63
SDCBP-208	ENST00000520228	NXPE3	Q969Y0	559 aa		11.12	□□□□□ -0.63
SDCBP-208	ENST00000520228	HHIP	Q96QV1	700 aa		11.12	□□□□□ -0.63
SDCBP-208	ENST00000520228	SUV39H2	Q9H5I1	410 aa		11.12	□□□□□ -0.63
SDCBP-208	ENST00000520228	PRDM6	Q9NQX0	595 aa		11.12	□□□□□ -0.63
SDCBP-208	ENST00000520228	COL9A3	Q14050	684 aa	Predicted RBP	11.11	□□□□□ -0.63
SDCBP-208	ENST00000520228	ADAMTSL4	Q6UY14	1074 aa		11.11	□□□□□ -0.63
SDCBP-208	ENST00000520228	FAM9A	Q8IZU1	332 aa	Predicted RBP	11.11	□□□□□ -0.63
SDCBP-208	ENST00000520228	TCF12	Q99081	682 aa		11.11	□□□□□ -0.63
SDCBP-208	ENST00000520228	BHLHE41	Q9C0J9	482 aa	Predicted RBP	11.11	□□□□□ -0.63
SDCBP-208	ENST00000520228	NLRP2	Q9NX02	1062 aa		11.11	□□□□□ -0.63
SDCBP-208	ENST00000520228	PARP2	Q9UGN5	583 aa		11.11	□□□□□ -0.63
SDCBP-208	ENST00000520228		M0R082	166 aa		11.1	□□□□□ -0.63
SDCBP-208	ENST00000520228	RGS9	O75916	674 aa	Predicted RBP	11.1	□□□□□ -0.63
SDCBP-208	ENST00000520228	GNA15	P30679	374 aa		11.1	□□□□□ -0.63

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