RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 TRIM33Q9UPN9 1127 aa10.75□□□□□ -0.69
PTPN12-213ENST00000519553 PRPF40AO75400 957 aaKnown RBP10.74□□□□□ -0.69
PTPN12-213ENST00000519553 ATP2B2Q01814 1243 aa10.74□□□□□ -0.69
PTPN12-213ENST00000519553 ADAMTS8Q9UP79 889 aa10.74□□□□□ -0.69
PTPN12-213ENST00000519553 LILRB5O75023 590 aa10.73□□□□□ -0.69
PTPN12-213ENST00000519553 NID1P14543 1247 aa10.73□□□□□ -0.69
PTPN12-213ENST00000519553 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.73□□□□□ -0.69
PTPN12-213ENST00000519553 CEP135Q66GS9 1140 aa10.73□□□□□ -0.69
PTPN12-213ENST00000519553 LINC00114Q6XXX2 140 aa10.73□□□□□ -0.69
PTPN12-213ENST00000519553 TMEM102Q8N9M5 508 aaPredicted RBP10.73□□□□□ -0.69
PTPN12-213ENST00000519553 TCF12Q99081 682 aa10.73□□□□□ -0.69
PTPN12-213ENST00000519553 POP1Q99575 1024 aaKnown RBP10.73□□□□□ -0.69
PTPN12-213ENST00000519553 RRAGCQ9HB90 399 aa10.73□□□□□ -0.69
PTPN12-213ENST00000519553 RNF19AQ9NV58 838 aa10.73□□□□□ -0.69
PTPN12-213ENST00000519553 SMNDC1O75940 238 aaKnown RBP eCLIP10.72□□□□□ -0.69
PTPN12-213ENST00000519553 NXPE3Q969Y0 559 aa10.72□□□□□ -0.69
PTPN12-213ENST00000519553 BCL2L13Q9BXK5 485 aa10.72□□□□□ -0.69
PTPN12-213ENST00000519553 BHLHE41Q9C0J9 482 aaPredicted RBP10.72□□□□□ -0.69
PTPN12-213ENST00000519553 SUV39H2Q9H5I1 410 aa10.72□□□□□ -0.69
PTPN12-213ENST00000519553 PDE2AO00408 941 aaPredicted RBP10.71□□□□□ -0.69
PTPN12-213ENST00000519553 GRM2Q14416 872 aa10.71□□□□□ -0.69
PTPN12-213ENST00000519553 ILDR2Q71H61 639 aa10.71□□□□□ -0.69
PTPN12-213ENST00000519553 GLIS3Q8NEA6 775 aa10.71□□□□□ -0.69
PTPN12-213ENST00000519553 BAG6P46379 1132 aa10.7□□□□□ -0.7
PTPN12-213ENST00000519553 GDF6Q6KF10 455 aaPredicted RBP10.7□□□□□ -0.7
PTPN12-213ENST00000519553 CCNJLQ8IV13 435 aa10.7□□□□□ -0.7
PTPN12-213ENST00000519553 GIPC2Q8TF65 315 aa10.7□□□□□ -0.7
PTPN12-213ENST00000519553 TRIM11Q96F44 468 aa10.7□□□□□ -0.7
PTPN12-213ENST00000519553 DUSP9Q99956 384 aaKnown RBP10.7□□□□□ -0.7
PTPN12-213ENST00000519553 LIN7BQ9HAP6 207 aa10.7□□□□□ -0.7
PTPN12-213ENST00000519553 NLRP2Q9NX02 1062 aa10.7□□□□□ -0.7
PTPN12-213ENST00000519553 METTL12A8MUP2 240 aa10.69□□□□□ -0.7
PTPN12-213ENST00000519553 GADD45BO75293 160 aaPredicted RBP10.69□□□□□ -0.7
PTPN12-213ENST00000519553 PRPF40BQ6NWY9 871 aaKnown RBP10.69□□□□□ -0.7
PTPN12-213ENST00000519553 FOXD4L4Q8WXT5 416 aaPredicted RBP10.69□□□□□ -0.7
PTPN12-213ENST00000519553 EHD4Q9H223 541 aa10.69□□□□□ -0.7
PTPN12-213ENST00000519553 ABCB6Q9NP58 842 aa10.69□□□□□ -0.7
PTPN12-213ENST00000519553 GRIA4P48058 902 aa10.68□□□□□ -0.7
PTPN12-213ENST00000519553 BCO2Q9BYV7 579 aa10.68□□□□□ -0.7
PTPN12-213ENST00000519553 LACRTQ9GZZ8 138 aa10.68□□□□□ -0.7
PTPN12-213ENST00000519553 ADAM19Q9H013 955 aa10.68□□□□□ -0.7
PTPN12-213ENST00000519553 CNTNAP5Q8WYK1 1306 aa10.67□□□□□ -0.7
PTPN12-213ENST00000519553 ZNF16P17020 682 aaPredicted RBP10.67□□□□□ -0.7
PTPN12-213ENST00000519553 GNA15P30679 374 aa10.67□□□□□ -0.7
PTPN12-213ENST00000519553 FGD1P98174 961 aa10.67□□□□□ -0.7
PTPN12-213ENST00000519553 MSL1Q68DK7 614 aa10.67□□□□□ -0.7
PTPN12-213ENST00000519553 OSBPL7Q9BZF2 842 aa10.67□□□□□ -0.7
PTPN12-213ENST00000519553 PARP2Q9UGN5 583 aa10.67□□□□□ -0.7
PTPN12-213ENST00000519553 MKL2Q9ULH7 1088 aa10.67□□□□□ -0.7
PTPN12-213ENST00000519553 RBM47A0AV96 593 aaKnown RBP10.66□□□□□ -0.7
PTPN12-213ENST00000519553 GNB5O14775 395 aa10.66□□□□□ -0.7
PTPN12-213ENST00000519553 PTPRAP18433 802 aa10.66□□□□□ -0.7
PTPN12-213ENST00000519553 SOX13Q9UN79 622 aa10.66□□□□□ -0.7
PTPN12-213ENST00000519553 EPHA1P21709 976 aa10.65□□□□□ -0.7
PTPN12-213ENST00000519553 NXPE4Q6UWF7 544 aa10.65□□□□□ -0.7
PTPN12-213ENST00000519553 CACTIN-AS1Q8N1I8 211 aa10.65□□□□□ -0.7
PTPN12-213ENST00000519553 IL22RA1Q8N6P7 574 aa10.65□□□□□ -0.7
PTPN12-213ENST00000519553 SH2B1Q9NRF2 756 aaPredicted RBP10.65□□□□□ -0.7
PTPN12-213ENST00000519553 STK17AQ9UEE5 414 aa10.65□□□□□ -0.7
PTPN12-213ENST00000519553 TRAK1Q9UPV9 953 aa10.65□□□□□ -0.7
PTPN12-213ENST00000519553 SPG7Q9UQ90 795 aa10.65□□□□□ -0.7
PTPN12-213ENST00000519553 DAB2P98082 770 aa10.64□□□□□ -0.71
PTPN12-213ENST00000519553 SPRED3Q2MJR0 410 aa10.64□□□□□ -0.71
PTPN12-213ENST00000519553 WFDC8Q8IUA0 241 aa10.64□□□□□ -0.71
PTPN12-213ENST00000519553 ASAP3Q8TDY4 903 aa10.64□□□□□ -0.71
PTPN12-213ENST00000519553 BSNDQ8WZ55 320 aa10.64□□□□□ -0.71
PTPN12-213ENST00000519553 FAM161BQ96MY7 647 aa10.64□□□□□ -0.71
PTPN12-213ENST00000519553 MUC3BQ9H195 1237 aa10.64□□□□□ -0.71
PTPN12-213ENST00000519553 ITPKAP23677 461 aa10.63□□□□□ -0.71
PTPN12-213ENST00000519553 CDC27P30260 824 aa10.63□□□□□ -0.71
PTPN12-213ENST00000519553 TMC4Q7Z404 712 aa10.63□□□□□ -0.71
PTPN12-213ENST00000519553 VN1R5Q7Z5H4 357 aa10.63□□□□□ -0.71
PTPN12-213ENST00000519553 PODNQ7Z5L7 613 aa10.63□□□□□ -0.71
PTPN12-213ENST00000519553 FRMD6Q96NE9 622 aa10.63□□□□□ -0.71
PTPN12-213ENST00000519553 C12orf49Q9H741 205 aa10.63□□□□□ -0.71
PTPN12-213ENST00000519553 A0A096LPE4 126 aa10.62□□□□□ -0.71
PTPN12-213ENST00000519553 TMEM238LA0A1B0GVL6 79 aa10.62□□□□□ -0.71
PTPN12-213ENST00000519553 A0A1W2PPZ6 126 aa10.62□□□□□ -0.71
PTPN12-213ENST00000519553 FAM181BA6NEQ2 426 aa10.62□□□□□ -0.71
PTPN12-213ENST00000519553 GIPC1O14908 333 aa10.62□□□□□ -0.71
PTPN12-213ENST00000519553 ZNF326Q5BKZ1 582 aaKnown RBP10.62□□□□□ -0.71
PTPN12-213ENST00000519553 DMRTC2Q8IXT2 367 aaPredicted RBP10.62□□□□□ -0.71
PTPN12-213ENST00000519553 BEND7Q8N7W2 519 aaPredicted RBP10.62□□□□□ -0.71
PTPN12-213ENST00000519553 PLVAPQ9BX97 442 aa10.62□□□□□ -0.71
PTPN12-213ENST00000519553 SRCIN1Q9C0H9 1055 aa10.62□□□□□ -0.71
PTPN12-213ENST00000519553 C3orf58Q8NDZ4 430 aa10.61□□□□□ -0.71
PTPN12-213ENST00000519553 SCARF2Q96GP6 870 aaPredicted RBP10.61□□□□□ -0.71
PTPN12-213ENST00000519553 PPME1Q9Y570 386 aa10.61□□□□□ -0.71
PTPN12-213ENST00000519553 AK5Q9Y6K8 562 aa10.61□□□□□ -0.71
PTPN12-213ENST00000519553 XPCQ01831 940 aaPredicted RBP10.6□□□□□ -0.71
PTPN12-213ENST00000519553 PTPN12Q05209 780 aaKnown RBP10.6□□□□□ -0.71
PTPN12-213ENST00000519553 TXNDC11Q6PKC3 985 aa10.6□□□□□ -0.71
PTPN12-213ENST00000519553 ZNF576Q9H609 170 aa10.6□□□□□ -0.71
PTPN12-213ENST00000519553 A0A0A0MRY4 1105 aa10.59□□□□□ -0.71
PTPN12-213ENST00000519553 H3BRJ5 948 aa10.59□□□□□ -0.71
PTPN12-213ENST00000519553 PIK3R2O00459 728 aa10.59□□□□□ -0.71
PTPN12-213ENST00000519553 TM4SF5O14894 197 aa10.59□□□□□ -0.71
PTPN12-213ENST00000519553 COL8A1P27658 744 aa10.59□□□□□ -0.71
PTPN12-213ENST00000519553 FCGRTP55899 365 aa10.59□□□□□ -0.71
PTPN12-213ENST00000519553 PSMD2Q13200 908 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms