RNA–Protein interactions for RNA: ENST00000519481.5

PVT1-208, Transcript of Pvt1 oncogene, humanhuman

TSL 2

Gene PVT1, Length 542 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PVT1-208ENST00000519481 THSD7BQ9C0I4 1608 aa13.86□□□□□ -0.19
PVT1-208ENST00000519481 MED23Q9ULK4 1368 aa13.85□□□□□ -0.19
PVT1-208ENST00000519481 ZNF609O15014 1411 aa13.85□□□□□ -0.19
PVT1-208ENST00000519481 ADM5C9JUS6 153 aa13.85□□□□□ -0.19
PVT1-208ENST00000519481 ITGA6P23229 1130 aa13.85□□□□□ -0.19
PVT1-208ENST00000519481 SCARF1Q14162 830 aa13.85□□□□□ -0.19
PVT1-208ENST00000519481 RGMBQ6NW40 437 aa13.85□□□□□ -0.19
PVT1-208ENST00000519481 OGFOD1Q8N543 542 aa13.85□□□□□ -0.19
PVT1-208ENST00000519481 FBXW7Q969H0 707 aa13.85□□□□□ -0.19
PVT1-208ENST00000519481 CCDC102AQ96A19 550 aa13.85□□□□□ -0.19
PVT1-208ENST00000519481 PLA2G12BQ9BX93 195 aa13.85□□□□□ -0.19
PVT1-208ENST00000519481 VAMP4O75379 141 aa13.84□□□□□ -0.19
PVT1-208ENST00000519481 KCNJ4P48050 445 aa13.84□□□□□ -0.19
PVT1-208ENST00000519481 EXOSC9Q06265 439 aaKnown RBP13.84□□□□□ -0.19
PVT1-208ENST00000519481 COA1Q9GZY4 146 aa13.84□□□□□ -0.19
PVT1-208ENST00000519481 MYOZ2Q9NPC6 264 aa13.84□□□□□ -0.19
PVT1-208ENST00000519481 MYO3BQ8WXR4 1341 aa13.84□□□□□ -0.19
PVT1-208ENST00000519481 MYH3P11055 1940 aa13.84□□□□□ -0.19
PVT1-208ENST00000519481 SCN9AQ15858 1988 aa13.83□□□□□ -0.19
PVT1-208ENST00000519481 ANKRD18BA2A2Z9 1011 aa13.83□□□□□ -0.2
PVT1-208ENST00000519481 MMP14P50281 582 aa13.83□□□□□ -0.2
PVT1-208ENST00000519481 ZNF157P51786 506 aaPredicted RBP13.83□□□□□ -0.2
PVT1-208ENST00000519481 ANGEL2Q5VTE6 544 aaKnown RBP13.83□□□□□ -0.2
PVT1-208ENST00000519481 DLK2Q6UY11 383 aa13.83□□□□□ -0.2
PVT1-208ENST00000519481 CDCA5Q96FF9 252 aa13.83□□□□□ -0.2
PVT1-208ENST00000519481 GMLQ99445 158 aa13.83□□□□□ -0.2
PVT1-208ENST00000519481 TSKSQ9UJT2 592 aa13.83□□□□□ -0.2
PVT1-208ENST00000519481 PITPNM2Q9BZ72 1349 aa13.83□□□□□ -0.2
PVT1-208ENST00000519481 CACNA1FO60840 1977 aa13.82□□□□□ -0.2
PVT1-208ENST00000519481 POLR2AP24928 1970 aaKnown RBP13.82□□□□□ -0.2
PVT1-208ENST00000519481 CSF1RP07333 972 aa13.82□□□□□ -0.2
PVT1-208ENST00000519481 FAM161AQ3B820 660 aa13.82□□□□□ -0.2
PVT1-208ENST00000519481 STRIP1Q5VSL9 837 aa13.82□□□□□ -0.2
PVT1-208ENST00000519481 ABHD8Q96I13 439 aa13.82□□□□□ -0.2
PVT1-208ENST00000519481 HDAC9Q9UKV0 1011 aa13.82□□□□□ -0.2
PVT1-208ENST00000519481 CHMP3Q9Y3E7 222 aa13.82□□□□□ -0.2
PVT1-208ENST00000519481 ZNF804BA4D1E1 1349 aa13.82□□□□□ -0.2
PVT1-208ENST00000519481 CASP7P55210 303 aa13.81□□□□□ -0.2
PVT1-208ENST00000519481 FKBP1BP68106 108 aa13.81□□□□□ -0.2
PVT1-208ENST00000519481 IFIT5Q13325 482 aaKnown RBP13.81□□□□□ -0.2
PVT1-208ENST00000519481 DACT2Q5SW24 774 aa13.81□□□□□ -0.2
PVT1-208ENST00000519481 FAM9BQ8IZU0 186 aa13.81□□□□□ -0.2
PVT1-208ENST00000519481 ASTN2O75129 1339 aaPredicted RBP13.81□□□□□ -0.2
PVT1-208ENST00000519481 WTIPA6NIX2 430 aaPredicted RBP13.8□□□□□ -0.2
PVT1-208ENST00000519481 CHRNDQ07001 517 aa13.8□□□□□ -0.2
PVT1-208ENST00000519481 TAF7LQ5H9L4 462 aa13.8□□□□□ -0.2
PVT1-208ENST00000519481 TTLL5Q6EMB2 1281 aa13.8□□□□□ -0.2
PVT1-208ENST00000519481 PSME4Q14997 1843 aa13.79□□□□□ -0.2
PVT1-208ENST00000519481 F6X3S4 739 aa13.79□□□□□ -0.2
PVT1-208ENST00000519481 NF2P35240 595 aa13.79□□□□□ -0.2
PVT1-208ENST00000519481 KIF23Q02241 960 aaPredicted RBP13.79□□□□□ -0.2
PVT1-208ENST00000519481 REM2Q8IYK8 340 aaPredicted RBP13.79□□□□□ -0.2
PVT1-208ENST00000519481 C9orf78Q9NZ63 289 aaPredicted RBP13.79□□□□□ -0.2
PVT1-208ENST00000519481 SPEF2Q9C093 1822 aa13.78□□□□□ -0.2
PVT1-208ENST00000519481 FAM155AB1AL88 458 aaPredicted RBP13.78□□□□□ -0.2
PVT1-208ENST00000519481 SLC10A3P09131 477 aa13.78□□□□□ -0.2
PVT1-208ENST00000519481 GTF2IP78347 998 aa13.78□□□□□ -0.2
PVT1-208ENST00000519481 TTLL12Q14166 644 aaPredicted RBP13.78□□□□□ -0.2
PVT1-208ENST00000519481 CCDC57Q2TAC2 916 aa13.78□□□□□ -0.2
PVT1-208ENST00000519481 BEND3Q5T5X7 828 aa13.78□□□□□ -0.2
PVT1-208ENST00000519481 TXNRD3Q86VQ6 643 aa13.78□□□□□ -0.2
PVT1-208ENST00000519481 ZIC5Q96T25 663 aa13.78□□□□□ -0.2
PVT1-208ENST00000519481 MXD3Q9BW11 206 aa13.78□□□□□ -0.2
PVT1-208ENST00000519481 SAGE1Q9NXZ1 904 aa13.78□□□□□ -0.2
PVT1-208ENST00000519481 CCDC85CA6NKD9 419 aa13.77□□□□□ -0.21
PVT1-208ENST00000519481 GRM8O00222 908 aa13.77□□□□□ -0.21
PVT1-208ENST00000519481 NBPF9Q3BBW0 867 aa13.77□□□□□ -0.21
PVT1-208ENST00000519481 SLC4A10Q6U841 1118 aa13.77□□□□□ -0.21
PVT1-208ENST00000519481 LMBR1LQ6UX01 489 aa13.77□□□□□ -0.21
PVT1-208ENST00000519481 ZNF804AQ7Z570 1209 aa13.77□□□□□ -0.21
PVT1-208ENST00000519481 APOBEC3FQ8IUX4 373 aaKnown RBP13.77□□□□□ -0.21
PVT1-208ENST00000519481 WNT10BO00744 389 aa13.76□□□□□ -0.21
PVT1-208ENST00000519481 ALDH1L1O75891 902 aa13.76□□□□□ -0.21
PVT1-208ENST00000519481 FOXO4P98177 505 aa13.76□□□□□ -0.21
PVT1-208ENST00000519481 LDHAL6AQ6ZMR3 332 aa13.76□□□□□ -0.21
PVT1-208ENST00000519481 KIAA0825Q8IV33 1275 aa13.76□□□□□ -0.21
PVT1-208ENST00000519481 SRCIN1Q9C0H9 1055 aa13.76□□□□□ -0.21
PVT1-208ENST00000519481 CD209Q9NNX6 404 aa13.76□□□□□ -0.21
PVT1-208ENST00000519481 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
PVT1-208ENST00000519481 CNNM1Q9NRU3 951 aa13.76□□□□□ -0.21
PVT1-208ENST00000519481 TAF5LO75529 589 aa13.75□□□□□ -0.21
PVT1-208ENST00000519481 TRPA1O75762 1119 aa13.75□□□□□ -0.21
PVT1-208ENST00000519481 SASH1O94885 1247 aa13.75□□□□□ -0.21
PVT1-208ENST00000519481 KLRK1P26718 216 aa13.75□□□□□ -0.21
PVT1-208ENST00000519481 DGKZQ13574 1117 aa13.75□□□□□ -0.21
PVT1-208ENST00000519481 C15orf52Q6ZUT6 534 aaKnown RBP13.75□□□□□ -0.21
PVT1-208ENST00000519481 RASAL3Q86YV0 1011 aa13.75□□□□□ -0.21
PVT1-208ENST00000519481 HELBQ8NG08 1087 aaPredicted RBP13.75□□□□□ -0.21
PVT1-208ENST00000519481 MCOLN1Q9GZU1 580 aa13.75□□□□□ -0.21
PVT1-208ENST00000519481 PAPPA2Q9BXP8 1791 aa13.75□□□□□ -0.21
PVT1-208ENST00000519481 CASP8AP2Q9UKL3 1982 aa13.74□□□□□ -0.21
PVT1-208ENST00000519481 UBE2Q2LH0YL09 131 aa13.74□□□□□ -0.21
PVT1-208ENST00000519481 PLIN1O60240 522 aa13.74□□□□□ -0.21
PVT1-208ENST00000519481 DLGAP5Q15398 846 aa13.74□□□□□ -0.21
PVT1-208ENST00000519481 ARMC9Q7Z3E5 817 aa13.74□□□□□ -0.21
PVT1-208ENST00000519481 CSRNP1Q96S65 589 aa13.74□□□□□ -0.21
PVT1-208ENST00000519481 RNF186Q9NXI6 227 aa13.74□□□□□ -0.21
PVT1-208ENST00000519481 SCAF8Q9UPN6 1271 aaKnown RBP13.74□□□□□ -0.21
PVT1-208ENST00000519481 MYO1BO43795 1136 aa13.73□□□□□ -0.21
PVT1-208ENST00000519481 PRAMEF18Q5VWM3 479 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms