RNA–Protein interactions for RNA: ENST00000518716.1

PABPC1-207, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2

Gene PABPC1, Length 694 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-207ENST00000518716 ARMC2Q8NEN0 867 aa8.52□□□□□ -1.05
PABPC1-207ENST00000518716 TMC1Q8TDI8 760 aa8.52□□□□□ -1.05
PABPC1-207ENST00000518716 SIN3AQ96ST3 1273 aa8.52□□□□□ -1.05
PABPC1-207ENST00000518716 BEGAINQ9BUH8 593 aa8.52□□□□□ -1.05
PABPC1-207ENST00000518716 CARD14Q9BXL6 1004 aa8.52□□□□□ -1.05
PABPC1-207ENST00000518716 POLMQ9NP87 494 aaPredicted RBP8.52□□□□□ -1.05
PABPC1-207ENST00000518716 C4BP0C0L5 1744 aa8.51□□□□□ -1.05
PABPC1-207ENST00000518716 RTL1A6NKG5 1358 aa8.51□□□□□ -1.05
PABPC1-207ENST00000518716 SSFA2P28290 1259 aa8.51□□□□□ -1.05
PABPC1-207ENST00000518716 COL13A1Q5TAT6 717 aaPredicted RBP8.51□□□□□ -1.05
PABPC1-207ENST00000518716 PIGBQ92521 554 aa8.51□□□□□ -1.05
PABPC1-207ENST00000518716 TESK2Q96S53 571 aa8.51□□□□□ -1.05
PABPC1-207ENST00000518716 KIAA1551Q9HCM1 1747 aa8.51□□□□□ -1.05
PABPC1-207ENST00000518716 PXDNLA1KZ92 1463 aa8.51□□□□□ -1.05
PABPC1-207ENST00000518716 KIF13BQ9NQT8 1826 aa8.5□□□□□ -1.05
PABPC1-207ENST00000518716 AMPHP49418 695 aa8.5□□□□□ -1.05
PABPC1-207ENST00000518716 TTLL12Q14166 644 aaPredicted RBP8.5□□□□□ -1.05
PABPC1-207ENST00000518716 LINC00116Q8NCU8 138 aa8.5□□□□□ -1.05
PABPC1-207ENST00000518716 SMARCC1Q92922 1105 aaPredicted RBP8.5□□□□□ -1.05
PABPC1-207ENST00000518716 NSD3Q9BZ95 1437 aa8.5□□□□□ -1.05
PABPC1-207ENST00000518716 WWC3Q9ULE0 1092 aa8.5□□□□□ -1.05
PABPC1-207ENST00000518716 NCAPD2Q15021 1401 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 FYB1O15117 783 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 TGFB2P61812 414 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 ITPK1Q13572 414 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 RRS1Q15050 365 aaKnown RBP8.49□□□□□ -1.05
PABPC1-207ENST00000518716 PRPF38BQ5VTL8 546 aaKnown RBP8.49□□□□□ -1.05
PABPC1-207ENST00000518716 MPRIPQ6WCQ1 1025 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 GIGYF2Q6Y7W6 1299 aaKnown RBP8.49□□□□□ -1.05
PABPC1-207ENST00000518716 PODNQ7Z5L7 613 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 USHBP1Q8N6Y0 703 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 RAPGEF4Q8WZA2 1011 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 KLRG1Q96E93 195 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 COG3Q96JB2 828 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 ZNF395Q9H8N7 513 aaPredicted RBP8.49□□□□□ -1.05
PABPC1-207ENST00000518716 NMRK2Q9NPI5 230 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 MBIPQ9NS73 344 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 ITGB4P16144 1822 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 PCDH11XQ9BZA7 1347 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 PCDH11YQ9BZA8 1340 aa8.49□□□□□ -1.05
PABPC1-207ENST00000518716 INSRP06213 1382 aa8.48□□□□□ -1.05
PABPC1-207ENST00000518716 LOC102724428A0A0B4J2F2 783 aa8.48□□□□□ -1.05
PABPC1-207ENST00000518716 BCRP11274 1271 aa8.48□□□□□ -1.05
PABPC1-207ENST00000518716 TATP17735 454 aaPredicted RBP8.48□□□□□ -1.05
PABPC1-207ENST00000518716 KCNA3P22001 575 aa8.48□□□□□ -1.05
PABPC1-207ENST00000518716 SIK1P57059 783 aa8.48□□□□□ -1.05
PABPC1-207ENST00000518716 HSP90AB2PQ58FF8 381 aa8.48□□□□□ -1.05
PABPC1-207ENST00000518716 FOXD4L5Q5VV16 416 aaPredicted RBP8.48□□□□□ -1.05
PABPC1-207ENST00000518716 NEDD1Q8NHV4 660 aa8.48□□□□□ -1.05
PABPC1-207ENST00000518716 AK7Q96M32 723 aa8.48□□□□□ -1.05
PABPC1-207ENST00000518716 C10orf71Q711Q0 1435 aa8.47□□□□□ -1.05
PABPC1-207ENST00000518716 KRBA1A5PL33 1030 aa8.47□□□□□ -1.05
PABPC1-207ENST00000518716 MMP10P09238 476 aa8.47□□□□□ -1.05
PABPC1-207ENST00000518716 FURINP09958 794 aa8.47□□□□□ -1.05
PABPC1-207ENST00000518716 PRELPP51888 382 aa8.47□□□□□ -1.05
PABPC1-207ENST00000518716 HTRA3P83110 453 aa8.47□□□□□ -1.05
PABPC1-207ENST00000518716 FSTL1Q12841 308 aa8.47□□□□□ -1.05
PABPC1-207ENST00000518716 TSC1Q92574 1164 aa8.47□□□□□ -1.05
PABPC1-207ENST00000518716 ACDQ96AP0 544 aa8.47□□□□□ -1.05
PABPC1-207ENST00000518716 KCTD15Q96SI1 283 aaPredicted RBP8.47□□□□□ -1.05
PABPC1-207ENST00000518716 CARD11Q9BXL7 1154 aa8.47□□□□□ -1.05
PABPC1-207ENST00000518716 KIF24Q5T7B8 1368 aa8.47□□□□□ -1.05
PABPC1-207ENST00000518716 WDR90Q96KV7 1748 aa8.46□□□□□ -1.05
PABPC1-207ENST00000518716 A0A0G2JLW4 131 aa8.46□□□□□ -1.06
PABPC1-207ENST00000518716 GPR25O00155 361 aa8.46□□□□□ -1.06
PABPC1-207ENST00000518716 CSPP1Q1MSJ5 1256 aa8.46□□□□□ -1.06
PABPC1-207ENST00000518716 ZNF837Q96EG3 531 aaPredicted RBP8.46□□□□□ -1.06
PABPC1-207ENST00000518716 SLC4A9Q96Q91 983 aa8.46□□□□□ -1.06
PABPC1-207ENST00000518716 ASAP1Q9ULH1 1129 aa8.46□□□□□ -1.06
PABPC1-207ENST00000518716 BRCA1P38398 1863 aaKnown RBP8.46□□□□□ -1.06
PABPC1-207ENST00000518716 PKD1L3Q7Z443 1732 aa8.46□□□□□ -1.06
PABPC1-207ENST00000518716 TULP1O00294 542 aaPredicted RBP8.45□□□□□ -1.06
PABPC1-207ENST00000518716 DPEP1P16444 411 aa8.45□□□□□ -1.06
PABPC1-207ENST00000518716 AMHR2Q16671 573 aa8.45□□□□□ -1.06
PABPC1-207ENST00000518716 RIC3Q7Z5B4 369 aa8.45□□□□□ -1.06
PABPC1-207ENST00000518716 NLGN1Q8N2Q7 840 aa8.45□□□□□ -1.06
PABPC1-207ENST00000518716 ATG3Q9NT62 314 aa8.45□□□□□ -1.06
PABPC1-207ENST00000518716 BCS1LQ9Y276 419 aa8.45□□□□□ -1.06
PABPC1-207ENST00000518716 KDRP35968 1356 aa8.45□□□□□ -1.06
PABPC1-207ENST00000518716 N4BP2Q86UW6 1770 aaPredicted RBP8.45□□□□□ -1.06
PABPC1-207ENST00000518716 GYS1P13807 737 aa8.44□□□□□ -1.06
PABPC1-207ENST00000518716 NEUROD1Q13562 356 aa8.44□□□□□ -1.06
PABPC1-207ENST00000518716 DIXDC1Q155Q3 683 aa8.44□□□□□ -1.06
PABPC1-207ENST00000518716 INTS6LQ5JSJ4 861 aaKnown RBP8.44□□□□□ -1.06
PABPC1-207ENST00000518716 C9orf131Q5VYM1 1079 aa8.44□□□□□ -1.06
PABPC1-207ENST00000518716 ARHGAP27Q6ZUM4 889 aa8.44□□□□□ -1.06
PABPC1-207ENST00000518716 GGNBP2Q9H3C7 697 aa8.44□□□□□ -1.06
PABPC1-207ENST00000518716 FLT4P35916 1363 aa8.44□□□□□ -1.06
PABPC1-207ENST00000518716 TONSLQ96HA7 1378 aa8.44□□□□□ -1.06
PABPC1-207ENST00000518716 ST20-MTHFSA0A0A6YYL1 179 aa8.43□□□□□ -1.06
PABPC1-207ENST00000518716 TMF1P82094 1093 aa8.43□□□□□ -1.06
PABPC1-207ENST00000518716 DHX9Q08211 1270 aaKnown RBP8.43□□□□□ -1.06
PABPC1-207ENST00000518716 QPCTQ16769 361 aa8.43□□□□□ -1.06
PABPC1-207ENST00000518716 TRAPPC3LQ5T215 181 aa8.43□□□□□ -1.06
PABPC1-207ENST00000518716 KDF1Q8NAX2 398 aaPredicted RBP8.43□□□□□ -1.06
PABPC1-207ENST00000518716 PLEKHG2Q9H7P9 1386 aa8.43□□□□□ -1.06
PABPC1-207ENST00000518716 SMG6Q86US8 1419 aaKnown RBP8.43□□□□□ -1.06
PABPC1-207ENST00000518716 ARFGEF1Q9Y6D6 1849 aa8.43□□□□□ -1.06
PABPC1-207ENST00000518716 SNRPNP63162 240 aaKnown RBP8.42□□□□□ -1.06
PABPC1-207ENST00000518716 LYSMD3Q7Z3D4 306 aa8.42□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms