RNA–Protein interactions for RNA: ENST00000518451.1

HOXA3-203, Transcript of homeobox A3, humanhuman

TSL 4

Gene HOXA3, Length 541 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-203ENST00000518451 KIF4BQ2VIQ3 1234 aa23.36■■□□□ 1.33
HOXA3-203ENST00000518451 OGFOD1Q8N543 542 aa23.36■■□□□ 1.33
HOXA3-203ENST00000518451 SUCLG2Q96I99 432 aa23.36■■□□□ 1.33
HOXA3-203ENST00000518451 ZNF609O15014 1411 aa23.35■■□□□ 1.33
HOXA3-203ENST00000518451 CELF2O95319 508 aaKnown RBP23.35■■□□□ 1.33
HOXA3-203ENST00000518451 FMR1Q06787 632 aaKnown RBP eCLIP23.35■■□□□ 1.33
HOXA3-203ENST00000518451 C15orf52Q6ZUT6 534 aaKnown RBP23.35■■□□□ 1.33
HOXA3-203ENST00000518451 USP48Q86UV5 1035 aa23.35■■□□□ 1.33
HOXA3-203ENST00000518451 GMLQ99445 158 aa23.35■■□□□ 1.33
HOXA3-203ENST00000518451 TAF5LO75529 589 aa23.34■■□□□ 1.33
HOXA3-203ENST00000518451 ECE1P42892 770 aa23.34■■□□□ 1.33
HOXA3-203ENST00000518451 TTLL5Q6EMB2 1281 aa23.34■■□□□ 1.33
HOXA3-203ENST00000518451 KRT26Q7Z3Y9 468 aa23.34■■□□□ 1.33
HOXA3-203ENST00000518451 TXNRD3Q86VQ6 643 aa23.34■■□□□ 1.33
HOXA3-203ENST00000518451 HELBQ8NG08 1087 aaPredicted RBP23.34■■□□□ 1.33
HOXA3-203ENST00000518451 FBXW7Q969H0 707 aa23.34■■□□□ 1.33
HOXA3-203ENST00000518451 ZNF594Q96JF6 807 aaPredicted RBP23.34■■□□□ 1.33
HOXA3-203ENST00000518451 EGFRP00533 1210 aa23.33■■□□□ 1.33
HOXA3-203ENST00000518451 HSPA1AP0DMV8 641 aaKnown RBP23.33■■□□□ 1.33
HOXA3-203ENST00000518451 HSPA1BP0DMV9 641 aaKnown RBP23.33■■□□□ 1.33
HOXA3-203ENST00000518451 BRPF1P55201 1214 aaPredicted RBP23.33■■□□□ 1.33
HOXA3-203ENST00000518451 DACT2Q5SW24 774 aa23.33■■□□□ 1.33
HOXA3-203ENST00000518451 MIER1Q8N108 512 aa23.33■■□□□ 1.33
HOXA3-203ENST00000518451 KAZALD1Q96I82 304 aa23.33■■□□□ 1.33
HOXA3-203ENST00000518451 MYOZ2Q9NPC6 264 aa23.33■■□□□ 1.33
HOXA3-203ENST00000518451 TLL2Q9Y6L7 1015 aa23.33■■□□□ 1.33
HOXA3-203ENST00000518451 PLIN1O60240 522 aa23.32■■□□□ 1.32
HOXA3-203ENST00000518451 RABL6Q3YEC7 729 aaPredicted RBP23.32■■□□□ 1.32
HOXA3-203ENST00000518451 ZNF804AQ7Z570 1209 aa23.32■■□□□ 1.32
HOXA3-203ENST00000518451 SULF1Q8IWU6 871 aa23.32■■□□□ 1.32
HOXA3-203ENST00000518451 API5Q9BZZ5 524 aaKnown RBP23.32■■□□□ 1.32
HOXA3-203ENST00000518451 USP44Q9H0E7 712 aa23.32■■□□□ 1.32
HOXA3-203ENST00000518451 BICC1Q9H694 974 aaKnown RBP23.32■■□□□ 1.32
HOXA3-203ENST00000518451 CD209Q9NNX6 404 aa23.32■■□□□ 1.32
HOXA3-203ENST00000518451 HDAC5Q9UQL6 1122 aa23.32■■□□□ 1.32
HOXA3-203ENST00000518451 WDR33Q9C0J8 1336 aaKnown RBP23.32■■□□□ 1.32
HOXA3-203ENST00000518451 SCARF1Q14162 830 aa23.31■■□□□ 1.32
HOXA3-203ENST00000518451 PAXIP1Q6ZW49 1069 aaPredicted RBP23.31■■□□□ 1.32
HOXA3-203ENST00000518451 ZNF408Q9H9D4 720 aa23.31■■□□□ 1.32
HOXA3-203ENST00000518451 NOB1Q9ULX3 412 aaKnown RBP23.31■■□□□ 1.32
HOXA3-203ENST00000518451 HHIPL1Q96JK4 782 aa23.3■■□□□ 1.32
HOXA3-203ENST00000518451 HDAC9Q9UKV0 1011 aa23.3■■□□□ 1.32
HOXA3-203ENST00000518451 KLRK1P26718 216 aa23.29■■□□□ 1.32
HOXA3-203ENST00000518451 GTF2IP78347 998 aa23.29■■□□□ 1.32
HOXA3-203ENST00000518451 UBE4AQ14139 1066 aa23.29■■□□□ 1.32
HOXA3-203ENST00000518451 SAPCD2Q86UD0 394 aa23.29■■□□□ 1.32
HOXA3-203ENST00000518451 AIDAQ96BJ3 306 aa23.29■■□□□ 1.32
HOXA3-203ENST00000518451 GGA3Q9NZ52 723 aa23.29■■□□□ 1.32
HOXA3-203ENST00000518451 MROH5Q6ZUA9 1318 aa23.29■■□□□ 1.32
HOXA3-203ENST00000518451 SCN9AQ15858 1988 aa23.29■■□□□ 1.32
HOXA3-203ENST00000518451 RARSP54136 660 aaKnown RBP23.28■■□□□ 1.32
HOXA3-203ENST00000518451 MAP2K1Q02750 393 aaPredicted RBP23.28■■□□□ 1.32
HOXA3-203ENST00000518451 ARHGAP45Q92619 1136 aa23.28■■□□□ 1.32
HOXA3-203ENST00000518451 CAPNS2Q96L46 248 aa23.28■■□□□ 1.32
HOXA3-203ENST00000518451 SPEF2Q9C093 1822 aa23.28■■□□□ 1.32
HOXA3-203ENST00000518451 SNAP23O00161 211 aa23.27■■□□□ 1.32
HOXA3-203ENST00000518451 IL1R1P14778 569 aa23.27■■□□□ 1.32
HOXA3-203ENST00000518451 ANKRD44Q8N8A2 993 aa23.27■■□□□ 1.32
HOXA3-203ENST00000518451 C2orf69Q8N8R5 385 aa23.27■■□□□ 1.32
HOXA3-203ENST00000518451 RIPOR2Q9Y4F9 1068 aa23.27■■□□□ 1.32
HOXA3-203ENST00000518451 IPO8O15397 1037 aaKnown RBP23.26■■□□□ 1.31
HOXA3-203ENST00000518451 ANGEL2Q5VTE6 544 aaKnown RBP23.26■■□□□ 1.31
HOXA3-203ENST00000518451 KIF16BQ96L93 1317 aa23.26■■□□□ 1.31
HOXA3-203ENST00000518451 PITPNM2Q9BZ72 1349 aa23.26■■□□□ 1.31
HOXA3-203ENST00000518451 UBTFL1P0CB47 393 aaPredicted RBP23.25■■□□□ 1.31
HOXA3-203ENST00000518451 IFFO2Q5TF58 517 aa23.25■■□□□ 1.31
HOXA3-203ENST00000518451 CYP4F22Q6NT55 531 aa23.25■■□□□ 1.31
HOXA3-203ENST00000518451 MXD3Q9BW11 206 aa23.25■■□□□ 1.31
HOXA3-203ENST00000518451 PUS3Q9BZE2 481 aaKnown RBP23.25■■□□□ 1.31
HOXA3-203ENST00000518451 IRS2Q9Y4H2 1338 aa23.25■■□□□ 1.31
HOXA3-203ENST00000518451 ADM5C9JUS6 153 aa23.24■■□□□ 1.31
HOXA3-203ENST00000518451 SASH1O94885 1247 aa23.24■■□□□ 1.31
HOXA3-203ENST00000518451 MAP2K2P36507 400 aa23.24■■□□□ 1.31
HOXA3-203ENST00000518451 FKBP1AP62942 108 aaKnown RBP23.24■■□□□ 1.31
HOXA3-203ENST00000518451 GRM1Q13255 1194 aa23.24■■□□□ 1.31
HOXA3-203ENST00000518451 GBA2Q9HCG7 927 aaPredicted RBP23.24■■□□□ 1.31
HOXA3-203ENST00000518451 WBP1LQ9NX94 342 aa23.24■■□□□ 1.31
HOXA3-203ENST00000518451 HIBADHP31937 336 aaKnown RBP23.23■■□□□ 1.31
HOXA3-203ENST00000518451 HNRNPUQ00839 825 aaKnown RBP eCLIP23.23■■□□□ 1.31
HOXA3-203ENST00000518451 METTL24Q5JXM2 366 aa23.23■■□□□ 1.31
HOXA3-203ENST00000518451 KIAA0825Q8IV33 1275 aa23.23■■□□□ 1.31
HOXA3-203ENST00000518451 BEGAINQ9BUH8 593 aa23.23■■□□□ 1.31
HOXA3-203ENST00000518451 TRPM7Q96QT4 1865 aa23.23■■□□□ 1.31
HOXA3-203ENST00000518451 PCNTO95613 3336 aa23.23■■□□□ 1.31
HOXA3-203ENST00000518451 HUNKP57058 714 aa23.22■■□□□ 1.31
HOXA3-203ENST00000518451 ASTN2O75129 1339 aaPredicted RBP23.22■■□□□ 1.31
HOXA3-203ENST00000518451 WNT10BO00744 389 aa23.21■■□□□ 1.31
HOXA3-203ENST00000518451 CTCFP49711 727 aaPredicted RBP23.21■■□□□ 1.31
HOXA3-203ENST00000518451 NBPF9Q3BBW0 867 aa23.21■■□□□ 1.31
HOXA3-203ENST00000518451 CAVIN4Q5BKX8 364 aa23.21■■□□□ 1.31
HOXA3-203ENST00000518451 COL13A1Q5TAT6 717 aaPredicted RBP23.21■■□□□ 1.31
HOXA3-203ENST00000518451 VPS37DQ86XT2 251 aa23.21■■□□□ 1.31
HOXA3-203ENST00000518451 PSME4Q14997 1843 aa23.21■■□□□ 1.31
HOXA3-203ENST00000518451 PDE8BO95263 885 aa23.2■■□□□ 1.3
HOXA3-203ENST00000518451 LRRC24Q50LG9 513 aa23.2■■□□□ 1.3
HOXA3-203ENST00000518451 DLK2Q6UY11 383 aa23.2■■□□□ 1.3
HOXA3-203ENST00000518451 CDCA5Q96FF9 252 aa23.2■■□□□ 1.3
HOXA3-203ENST00000518451 FOXN1O15353 648 aa23.19■■□□□ 1.3
HOXA3-203ENST00000518451 DLGAP5Q15398 846 aa23.19■■□□□ 1.3
HOXA3-203ENST00000518451 INTS3Q68E01 1043 aaKnown RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms