RNA–Protein interactions for RNA: ENST00000517979.1

CCDC25-202, Transcript of coiled-coil domain containing 25, humanhuman

TSL 1 (best)

Gene CCDC25, Length 877 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC25-202ENST00000517979 LMBR1LQ6UX01 489 aa17.33■□□□□ 0.36
CCDC25-202ENST00000517979 ANKRD2Q9GZV1 360 aa17.33■□□□□ 0.36
CCDC25-202ENST00000517979 SMC4Q9NTJ3 1288 aa17.33■□□□□ 0.36
CCDC25-202ENST00000517979 WTIPA6NIX2 430 aaPredicted RBP17.32■□□□□ 0.36
CCDC25-202ENST00000517979 KCNJ4P48050 445 aa17.32■□□□□ 0.36
CCDC25-202ENST00000517979 ALDH1L2Q3SY69 923 aa17.32■□□□□ 0.36
CCDC25-202ENST00000517979 TAF7LQ5H9L4 462 aa17.32■□□□□ 0.36
CCDC25-202ENST00000517979 EPHA10Q5JZY3 1008 aa17.32■□□□□ 0.36
CCDC25-202ENST00000517979 TRMT2AQ8IZ69 625 aaKnown RBP17.32■□□□□ 0.36
CCDC25-202ENST00000517979 RTN4Q9NQC3 1192 aaKnown RBP17.32■□□□□ 0.36
CCDC25-202ENST00000517979 LEMD3Q9Y2U8 911 aa17.32■□□□□ 0.36
CCDC25-202ENST00000517979 CNTNAP1P78357 1384 aa17.31■□□□□ 0.36
CCDC25-202ENST00000517979 ZNF804BA4D1E1 1349 aa17.31■□□□□ 0.36
CCDC25-202ENST00000517979 TRAF5O00463 557 aa17.31■□□□□ 0.36
CCDC25-202ENST00000517979 VIL1P09327 827 aaKnown RBP17.31■□□□□ 0.36
CCDC25-202ENST00000517979 HIRAP54198 1017 aaPredicted RBP17.31■□□□□ 0.36
CCDC25-202ENST00000517979 CHRNDQ07001 517 aa17.31■□□□□ 0.36
CCDC25-202ENST00000517979 CCDC57Q2TAC2 916 aa17.31■□□□□ 0.36
CCDC25-202ENST00000517979 TBC1D10BQ4KMP7 808 aaPredicted RBP17.31■□□□□ 0.36
CCDC25-202ENST00000517979 SAMD7Q7Z3H4 446 aa17.31■□□□□ 0.36
CCDC25-202ENST00000517979 PCNTO95613 3336 aa17.31■□□□□ 0.36
CCDC25-202ENST00000517979 CT47B1P0C2W7 299 aaPredicted RBP17.3■□□□□ 0.36
CCDC25-202ENST00000517979 FMR1Q06787 632 aaKnown RBP eCLIP17.3■□□□□ 0.36
CCDC25-202ENST00000517979 RSBN1LQ6PCB5 846 aaPredicted RBP17.3■□□□□ 0.36
CCDC25-202ENST00000517979 PODNQ7Z5L7 613 aa17.3■□□□□ 0.36
CCDC25-202ENST00000517979 ZC3H15Q8WU90 426 aaKnown RBP17.3■□□□□ 0.36
CCDC25-202ENST00000517979 SUCLG2Q96I99 432 aa17.3■□□□□ 0.36
CCDC25-202ENST00000517979 ABT1Q9ULW3 272 aaKnown RBP17.3■□□□□ 0.36
CCDC25-202ENST00000517979 PSME4Q14997 1843 aa17.29■□□□□ 0.36
CCDC25-202ENST00000517979 USP17L3A6NCW0 530 aa17.29■□□□□ 0.36
CCDC25-202ENST00000517979 USP17L4A6NCW7 530 aa17.29■□□□□ 0.36
CCDC25-202ENST00000517979 NBPF7P0C2Y1 421 aaPredicted RBP17.29■□□□□ 0.36
CCDC25-202ENST00000517979 RBM26Q5T8P6 1007 aaKnown RBP17.29■□□□□ 0.36
CCDC25-202ENST00000517979 USP17L1Q7RTZ2 530 aa17.29■□□□□ 0.36
CCDC25-202ENST00000517979 FBXW7Q969H0 707 aa17.29■□□□□ 0.36
CCDC25-202ENST00000517979 GLIS2Q9BZE0 524 aaPredicted RBP17.29■□□□□ 0.36
CCDC25-202ENST00000517979 UTYO14607 1347 aa17.28■□□□□ 0.36
CCDC25-202ENST00000517979 KLRK1P26718 216 aa17.28■□□□□ 0.36
CCDC25-202ENST00000517979 KIF4BQ2VIQ3 1234 aa17.28■□□□□ 0.36
CCDC25-202ENST00000517979 AGBL3Q8NEM8 1001 aa17.28■□□□□ 0.36
CCDC25-202ENST00000517979 HELBQ8NG08 1087 aaPredicted RBP17.28■□□□□ 0.36
CCDC25-202ENST00000517979 ZNF594Q96JF6 807 aaPredicted RBP17.28■□□□□ 0.36
CCDC25-202ENST00000517979 COA1Q9GZY4 146 aa17.28■□□□□ 0.36
CCDC25-202ENST00000517979 CNNM1Q9NRU3 951 aa17.28■□□□□ 0.36
CCDC25-202ENST00000517979 PGAP2Q9UHJ9 254 aa17.28■□□□□ 0.36
CCDC25-202ENST00000517979 TRPM7Q96QT4 1865 aa17.28■□□□□ 0.36
CCDC25-202ENST00000517979 ZNF609O15014 1411 aa17.28■□□□□ 0.36
CCDC25-202ENST00000517979 TAF5LO75529 589 aa17.27■□□□□ 0.36
CCDC25-202ENST00000517979 EGFRP00533 1210 aa17.27■□□□□ 0.36
CCDC25-202ENST00000517979 LDHAL6AQ6ZMR3 332 aa17.27■□□□□ 0.36
CCDC25-202ENST00000517979 TXNRD3Q86VQ6 643 aa17.27■□□□□ 0.36
CCDC25-202ENST00000517979 A0A1B0GUL6 1792 aa17.26■□□□□ 0.35
CCDC25-202ENST00000517979 CDC37L1Q7L3B6 337 aa17.26■□□□□ 0.35
CCDC25-202ENST00000517979 KAZALD1Q96I82 304 aa17.26■□□□□ 0.35
CCDC25-202ENST00000517979 BICC1Q9H694 974 aaKnown RBP17.26■□□□□ 0.35
CCDC25-202ENST00000517979 RASSF10A6NK89 507 aa17.25■□□□□ 0.35
CCDC25-202ENST00000517979 SNAP23O00161 211 aa17.25■□□□□ 0.35
CCDC25-202ENST00000517979 PLIN1O60240 522 aa17.25■□□□□ 0.35
CCDC25-202ENST00000517979 CELF2O95319 508 aaKnown RBP17.25■□□□□ 0.35
CCDC25-202ENST00000517979 USP17L8P0C7I0 530 aa17.25■□□□□ 0.35
CCDC25-202ENST00000517979 HSPA1AP0DMV8 641 aaKnown RBP17.25■□□□□ 0.35
CCDC25-202ENST00000517979 HSPA1BP0DMV9 641 aaKnown RBP17.25■□□□□ 0.35
CCDC25-202ENST00000517979 VEGFBP49765 207 aa17.25■□□□□ 0.35
CCDC25-202ENST00000517979 DEFB115Q30KQ5 88 aa17.25■□□□□ 0.35
CCDC25-202ENST00000517979 CST9Q5W186 159 aa17.25■□□□□ 0.35
CCDC25-202ENST00000517979 ZNF408Q9H9D4 720 aa17.25■□□□□ 0.35
CCDC25-202ENST00000517979 NUBP1P53384 320 aa17.24■□□□□ 0.35
CCDC25-202ENST00000517979 ZNF280AP59817 542 aaPredicted RBP17.24■□□□□ 0.35
CCDC25-202ENST00000517979 STRIP1Q5VSL9 837 aa17.24■□□□□ 0.35
CCDC25-202ENST00000517979 PAXIP1Q6ZW49 1069 aaPredicted RBP17.24■□□□□ 0.35
CCDC25-202ENST00000517979 KRT26Q7Z3Y9 468 aa17.24■□□□□ 0.35
CCDC25-202ENST00000517979 USP48Q86UV5 1035 aa17.24■□□□□ 0.35
CCDC25-202ENST00000517979 DCPSQ96C86 337 aaKnown RBP17.24■□□□□ 0.35
CCDC25-202ENST00000517979 GMLQ99445 158 aa17.24■□□□□ 0.35
CCDC25-202ENST00000517979 MXD3Q9BW11 206 aa17.24■□□□□ 0.35
CCDC25-202ENST00000517979 GGA3Q9NZ52 723 aa17.24■□□□□ 0.35
CCDC25-202ENST00000517979 NOB1Q9ULX3 412 aaKnown RBP17.24■□□□□ 0.35
CCDC25-202ENST00000517979 MYO3BQ8WXR4 1341 aa17.23■□□□□ 0.35
CCDC25-202ENST00000517979 HNRNPUQ00839 825 aaKnown RBP eCLIP17.23■□□□□ 0.35
CCDC25-202ENST00000517979 RABL6Q3YEC7 729 aaPredicted RBP17.23■□□□□ 0.35
CCDC25-202ENST00000517979 DACT2Q5SW24 774 aa17.23■□□□□ 0.35
CCDC25-202ENST00000517979 ANKRD44Q8N8A2 993 aa17.23■□□□□ 0.35
CCDC25-202ENST00000517979 API5Q9BZZ5 524 aaKnown RBP17.23■□□□□ 0.35
CCDC25-202ENST00000517979 USP44Q9H0E7 712 aa17.23■□□□□ 0.35
CCDC25-202ENST00000517979 MYOZ2Q9NPC6 264 aa17.23■□□□□ 0.35
CCDC25-202ENST00000517979 RARSP54136 660 aaKnown RBP17.22■□□□□ 0.35
CCDC25-202ENST00000517979 TTLL5Q6EMB2 1281 aa17.22■□□□□ 0.35
CCDC25-202ENST00000517979 C15orf52Q6ZUT6 534 aaKnown RBP17.22■□□□□ 0.35
CCDC25-202ENST00000517979 ZNF804AQ7Z570 1209 aa17.22■□□□□ 0.35
CCDC25-202ENST00000517979 CD209Q9NNX6 404 aa17.22■□□□□ 0.35
CCDC25-202ENST00000517979 TLL2Q9Y6L7 1015 aa17.22■□□□□ 0.35
CCDC25-202ENST00000517979 ASTN2O75129 1339 aaPredicted RBP17.21■□□□□ 0.35
CCDC25-202ENST00000517979 KIF16BQ96L93 1317 aa17.21■□□□□ 0.35
CCDC25-202ENST00000517979 IRS2Q9Y4H2 1338 aa17.21■□□□□ 0.35
CCDC25-202ENST00000517979 ZNF646O15015 1829 aaPredicted RBP17.21■□□□□ 0.35
CCDC25-202ENST00000517979 ADM5C9JUS6 153 aa17.21■□□□□ 0.35
CCDC25-202ENST00000517979 BRPF1P55201 1214 aaPredicted RBP17.21■□□□□ 0.35
CCDC25-202ENST00000517979 GTF2IP78347 998 aa17.21■□□□□ 0.35
CCDC25-202ENST00000517979 GRM1Q13255 1194 aa17.21■□□□□ 0.35
CCDC25-202ENST00000517979 SCARF1Q14162 830 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms