RNA–Protein interactions for RNA: ENST00000517921.1

PABPC1-203, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 5

Gene PABPC1, Length 885 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-203ENST00000517921 MAP4K4O95819 1239 aaPredicted RBP12.9□□□□□ -0.34
PABPC1-203ENST00000517921 STYK1Q6J9G0 422 aa12.9□□□□□ -0.34
PABPC1-203ENST00000517921 TMC4Q7Z404 712 aa12.9□□□□□ -0.34
PABPC1-203ENST00000517921 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.9□□□□□ -0.34
PABPC1-203ENST00000517921 BOLA2Q9H3K6 86 aa12.9□□□□□ -0.34
PABPC1-203ENST00000517921 FER1L6Q2WGJ9 1857 aa12.9□□□□□ -0.34
PABPC1-203ENST00000517921 H0YIN7 160 aa12.89□□□□□ -0.35
PABPC1-203ENST00000517921 CDC45O75419 566 aa12.89□□□□□ -0.35
PABPC1-203ENST00000517921 IFIT1P09914 478 aaKnown RBP12.89□□□□□ -0.35
PABPC1-203ENST00000517921 CHRNA5P30532 468 aa12.89□□□□□ -0.35
PABPC1-203ENST00000517921 PHKA1P46020 1223 aa12.89□□□□□ -0.35
PABPC1-203ENST00000517921 TTC39AQ5SRH9 613 aa12.89□□□□□ -0.35
PABPC1-203ENST00000517921 TBC1D9Q6ZT07 1266 aa12.89□□□□□ -0.35
PABPC1-203ENST00000517921 CNTROBQ8N137 903 aa12.89□□□□□ -0.35
PABPC1-203ENST00000517921 HAUS7Q99871 368 aa12.89□□□□□ -0.35
PABPC1-203ENST00000517921 TSHZ2Q9NRE2 1034 aa12.89□□□□□ -0.35
PABPC1-203ENST00000517921 XDHP47989 1333 aa12.88□□□□□ -0.35
PABPC1-203ENST00000517921 IRS2Q9Y4H2 1338 aa12.88□□□□□ -0.35
PABPC1-203ENST00000517921 WTIPA6NIX2 430 aaPredicted RBP12.88□□□□□ -0.35
PABPC1-203ENST00000517921 ARID4AP29374 1257 aaPredicted RBP12.88□□□□□ -0.35
PABPC1-203ENST00000517921 ALDH1B1P30837 517 aa12.88□□□□□ -0.35
PABPC1-203ENST00000517921 CCDC158Q5M9N0 1113 aa12.88□□□□□ -0.35
PABPC1-203ENST00000517921 GORABQ5T7V8 394 aa12.88□□□□□ -0.35
PABPC1-203ENST00000517921 RILPL2Q969X0 211 aa12.88□□□□□ -0.35
PABPC1-203ENST00000517921 ZNF512BQ96KM6 892 aaPredicted RBP12.88□□□□□ -0.35
PABPC1-203ENST00000517921 ZNF804BA4D1E1 1349 aa12.88□□□□□ -0.35
PABPC1-203ENST00000517921 SCN9AQ15858 1988 aa12.87□□□□□ -0.35
PABPC1-203ENST00000517921 COL1A1P02452 1464 aaPredicted RBP12.87□□□□□ -0.35
PABPC1-203ENST00000517921 RFX7Q2KHR2 1363 aa12.87□□□□□ -0.35
PABPC1-203ENST00000517921 YBX3P16989 372 aaKnown RBP eCLIP12.87□□□□□ -0.353e-36■□□□□ 10.8
PABPC1-203ENST00000517921 KLRK1P26718 216 aa12.87□□□□□ -0.35
PABPC1-203ENST00000517921 KCNJ4P48050 445 aa12.87□□□□□ -0.35
PABPC1-203ENST00000517921 GPSM2P81274 684 aa12.87□□□□□ -0.35
PABPC1-203ENST00000517921 SCARF1Q14162 830 aa12.87□□□□□ -0.35
PABPC1-203ENST00000517921 CCDC102BQ68D86 513 aa12.87□□□□□ -0.35
PABPC1-203ENST00000517921 PRPF40BQ6NWY9 871 aaKnown RBP12.87□□□□□ -0.35
PABPC1-203ENST00000517921 ZNF622Q969S3 477 aaKnown RBP eCLIP12.87□□□□□ -0.35
PABPC1-203ENST00000517921 EVI5LQ96CN4 794 aa12.87□□□□□ -0.35
PABPC1-203ENST00000517921 EDC3Q96F86 508 aaKnown RBP12.87□□□□□ -0.35
PABPC1-203ENST00000517921 DNAJC2Q99543 621 aaKnown RBP12.87□□□□□ -0.35
PABPC1-203ENST00000517921 WWC3Q9ULE0 1092 aa12.87□□□□□ -0.35
PABPC1-203ENST00000517921 ATP6V0A2Q9Y487 856 aa12.87□□□□□ -0.35
PABPC1-203ENST00000517921 NDUFB9Q9Y6M9 179 aa12.87□□□□□ -0.35
PABPC1-203ENST00000517921 SNED1Q8TER0 1413 aa12.87□□□□□ -0.35
PABPC1-203ENST00000517921 SEC24BO95487 1268 aa12.86□□□□□ -0.35
PABPC1-203ENST00000517921 UQCRFS1P1P0C7P4 283 aa12.86□□□□□ -0.35
PABPC1-203ENST00000517921 MCAMP43121 646 aa12.86□□□□□ -0.35
PABPC1-203ENST00000517921 SP8Q8IXZ3 490 aa12.86□□□□□ -0.35
PABPC1-203ENST00000517921 PODXL2Q9NZ53 605 aa12.86□□□□□ -0.35
PABPC1-203ENST00000517921 ANKIB1Q9P2G1 1089 aa12.86□□□□□ -0.35
PABPC1-203ENST00000517921 LEMD3Q9Y2U8 911 aa12.86□□□□□ -0.35
PABPC1-203ENST00000517921 MYH2Q9UKX2 1941 aa12.86□□□□□ -0.35
PABPC1-203ENST00000517921 ATP2B4P23634 1241 aa12.85□□□□□ -0.35
PABPC1-203ENST00000517921 GYG1P46976 350 aa12.85□□□□□ -0.35
PABPC1-203ENST00000517921 BCAMP50895 628 aa12.85□□□□□ -0.35
PABPC1-203ENST00000517921 PI16Q6UXB8 463 aa12.85□□□□□ -0.35
PABPC1-203ENST00000517921 ZNF784Q8NCA9 323 aaPredicted RBP12.85□□□□□ -0.35
PABPC1-203ENST00000517921 CNKSR1Q969H4 720 aa12.85□□□□□ -0.35
PABPC1-203ENST00000517921 PAG1Q9NWQ8 432 aa12.85□□□□□ -0.35
PABPC1-203ENST00000517921 MED23Q9ULK4 1368 aa12.84□□□□□ -0.35
PABPC1-203ENST00000517921 GOLIM4O00461 696 aa12.84□□□□□ -0.35
PABPC1-203ENST00000517921 UFL1O94874 794 aa12.84□□□□□ -0.35
PABPC1-203ENST00000517921 DPEP1P16444 411 aa12.84□□□□□ -0.35
PABPC1-203ENST00000517921 KCNA3P22001 575 aa12.84□□□□□ -0.35
PABPC1-203ENST00000517921 CHMLP26374 656 aa12.84□□□□□ -0.35
PABPC1-203ENST00000517921 RASGRF1Q13972 1273 aa12.84□□□□□ -0.35
PABPC1-203ENST00000517921 OLFM4Q6UX06 510 aa12.84□□□□□ -0.35
PABPC1-203ENST00000517921 C15orf52Q6ZUT6 534 aaKnown RBP12.84□□□□□ -0.35
PABPC1-203ENST00000517921 FBXO33Q7Z6M2 555 aa12.84□□□□□ -0.35
PABPC1-203ENST00000517921 TXNRD3Q86VQ6 643 aa12.84□□□□□ -0.35
PABPC1-203ENST00000517921 TBC1D16Q8TBP0 767 aa12.84□□□□□ -0.35
PABPC1-203ENST00000517921 FAM84BQ96KN1 310 aaPredicted RBP12.84□□□□□ -0.35
PABPC1-203ENST00000517921 FSD1Q9BTV5 496 aa12.84□□□□□ -0.35
PABPC1-203ENST00000517921 GGA1Q9UJY5 639 aa12.84□□□□□ -0.35
PABPC1-203ENST00000517921 NSFL1CQ9UNZ2 370 aaKnown RBP12.84□□□□□ -0.35
PABPC1-203ENST00000517921 CDK5RAP2Q96SN8 1893 aa12.84□□□□□ -0.35
PABPC1-203ENST00000517921 GOLGB1Q14789 3259 aaKnown RBP12.84□□□□□ -0.35
PABPC1-203ENST00000517921 ZBTB22O15209 634 aa12.83□□□□□ -0.36
PABPC1-203ENST00000517921 ZAP70P43403 619 aa12.83□□□□□ -0.36
PABPC1-203ENST00000517921 TGFB2P61812 414 aa12.83□□□□□ -0.36
PABPC1-203ENST00000517921 CAVIN4Q5BKX8 364 aa12.83□□□□□ -0.36
PABPC1-203ENST00000517921 CASC1Q6TDU7 716 aa12.83□□□□□ -0.36
PABPC1-203ENST00000517921 KBTBD3Q8NAB2 608 aa12.83□□□□□ -0.36
PABPC1-203ENST00000517921 GPR101Q96P66 508 aaPredicted RBP12.83□□□□□ -0.36
PABPC1-203ENST00000517921 ANTXR1Q9H6X2 564 aa12.83□□□□□ -0.36
PABPC1-203ENST00000517921 SNRKQ9NRH2 765 aa12.83□□□□□ -0.36
PABPC1-203ENST00000517921 HMG20BQ9P0W2 317 aa12.83□□□□□ -0.36
PABPC1-203ENST00000517921 POLLQ9UGP5 575 aa12.83□□□□□ -0.36
PABPC1-203ENST00000517921 DICER1Q9UPY3 1922 aaKnown RBP12.82□□□□□ -0.36
PABPC1-203ENST00000517921 A0A0G2JLW4 131 aa12.82□□□□□ -0.36
PABPC1-203ENST00000517921 FKBP4Q02790 459 aaKnown RBP eCLIP12.82□□□□□ -0.36
PABPC1-203ENST00000517921 TTLL6Q8N841 843 aa12.82□□□□□ -0.36
PABPC1-203ENST00000517921 SPATA5Q8NB90 893 aa12.82□□□□□ -0.36
PABPC1-203ENST00000517921 C7orf43Q8WVR3 580 aa12.82□□□□□ -0.36
PABPC1-203ENST00000517921 ESYT1Q9BSJ8 1104 aa12.82□□□□□ -0.36
PABPC1-203ENST00000517921 IL25Q9H293 177 aa12.82□□□□□ -0.36
PABPC1-203ENST00000517921 LAMA4Q16363 1823 aa12.82□□□□□ -0.36
PABPC1-203ENST00000517921 HIP1O00291 1037 aa12.81□□□□□ -0.36
PABPC1-203ENST00000517921 CYP2E1P05181 493 aaPredicted RBP12.81□□□□□ -0.36
PABPC1-203ENST00000517921 HIBADHP31937 336 aaKnown RBP12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms