RNA–Protein interactions for RNA: ENST00000517490.5

CPNE3-203, Transcript of copine 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE3, Length 4,865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-203ENST00000517490 AKAP2Q9Y2D5 859 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 KLF18A0A0U1RQI7 1052 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 KIAA0754O94854 1291 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 ETF1P62495 437 aaKnown RBP7.66□□□□□ -1.18
CPNE3-203ENST00000517490 PPP2R3AQ06190 1150 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 POLA2Q14181 598 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 KRBA2Q6ZNG9 492 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 NCOA7Q8NI08 942 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 CARD6Q9BX69 1037 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 MYO3AQ8NEV4 1616 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 COL3A1P02461 1466 aaPredicted RBP7.66□□□□□ -1.18
CPNE3-203ENST00000517490 SHPRHQ149N8 1683 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 TXLNAP40222 546 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 CCDC57Q2TAC2 916 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 XPO4Q9C0E2 1151 aaKnown RBP7.66□□□□□ -1.18
CPNE3-203ENST00000517490 PLEKHG3A1L390 1219 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 ARHGAP6O43182 974 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 TUBB2AQ13885 445 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 CWF19L2Q2TBE0 894 aaKnown RBP7.66□□□□□ -1.18
CPNE3-203ENST00000517490 BAG1Q99933 345 aaPredicted RBP7.66□□□□□ -1.18
CPNE3-203ENST00000517490 TUBB2BQ9BVA1 445 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 TRIM34Q9BYJ4 488 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 BICC1Q9H694 974 aaKnown RBP7.66□□□□□ -1.18
CPNE3-203ENST00000517490 AMOTL2Q9Y2J4 779 aa7.66□□□□□ -1.18
CPNE3-203ENST00000517490 EFCAB8A8MWE9 144 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 CAPN2P17655 700 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 RDXP35241 583 aaKnown RBP7.65□□□□□ -1.18
CPNE3-203ENST00000517490 ADALQ6DHV7 355 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 GPR161Q8N6U8 529 aaKnown RBP7.65□□□□□ -1.18
CPNE3-203ENST00000517490 HELLSQ9NRZ9 838 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 A0A087WZG4 1122 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 CTAGE15A4D2H0 777 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 PPFIA3O75145 1194 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 CTAGE8P0CG41 777 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 HOXC9P31274 260 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 MCM6Q14566 821 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 NECTIN1Q15223 517 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 BEND3Q5T5X7 828 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 HDXQ7Z353 690 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 CTAGE6Q86UF2 777 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 CTAGE4Q8IX94 777 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 ZSWIM4Q9H7M6 989 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 KIAA1468Q9P260 1216 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 ADGRB1O14514 1584 aa7.65□□□□□ -1.18
CPNE3-203ENST00000517490 SHTN1A0MZ66 631 aa7.65□□□□□ -1.19
CPNE3-203ENST00000517490 PFKFB2O60825 505 aa7.65□□□□□ -1.19
CPNE3-203ENST00000517490 GIGYF1O75420 1035 aaPredicted RBP7.65□□□□□ -1.19
CPNE3-203ENST00000517490 ZFYP08048 801 aaPredicted RBP7.65□□□□□ -1.19
CPNE3-203ENST00000517490 CDR1P51861 262 aa7.65□□□□□ -1.19
CPNE3-203ENST00000517490 STIM1Q13586 685 aa7.65□□□□□ -1.19
CPNE3-203ENST00000517490 ESCO1Q5FWF5 840 aa7.65□□□□□ -1.19
CPNE3-203ENST00000517490 SMARCC1Q92922 1105 aaPredicted RBP7.65□□□□□ -1.19
CPNE3-203ENST00000517490 YEATS4O95619 227 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 IARSP41252 1262 aaKnown RBP7.64□□□□□ -1.19
CPNE3-203ENST00000517490 METAP2P50579 478 aaKnown RBP eCLIP7.64□□□□□ -1.19
CPNE3-203ENST00000517490 PIP4K2BP78356 416 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 FBXO38Q6PIJ6 1188 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 PPP1R13BQ96KQ4 1090 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 CTAGE1Q96RT6 745 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 A0A0D9SFI3 127 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 OAS2P29728 719 aaKnown RBP7.64□□□□□ -1.19
CPNE3-203ENST00000517490 MARCKSP29966 332 aaPredicted RBP7.64□□□□□ -1.19
CPNE3-203ENST00000517490 SSRP1Q08945 709 aaKnown RBP7.64□□□□□ -1.19
CPNE3-203ENST00000517490 C11orf57Q6ZUT1 292 aaPredicted RBP7.64□□□□□ -1.19
CPNE3-203ENST00000517490 THEMISQ8N1K5 641 aaPredicted RBP7.64□□□□□ -1.19
CPNE3-203ENST00000517490 CPLX3Q8WVH0 158 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 ALG1Q9BT22 464 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 NACAP1Q9BZK3 213 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 RCOR1Q9UKL0 485 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 PPRC1Q5VV67 1664 aaKnown RBP7.64□□□□□ -1.19
CPNE3-203ENST00000517490 CTAGE9A4FU28 777 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 UBE3BQ7Z3V4 1068 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 USP28Q96RU2 1077 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 PAG1Q9NWQ8 432 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 VPS18Q9P253 973 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 INO80Q9ULG1 1556 aaPredicted RBP7.64□□□□□ -1.19
CPNE3-203ENST00000517490 CCDC196A0A1B0GTZ2 297 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 GOLGA8AA7E2F4 631 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 ZNF202O95125 648 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 EIF4A1P60842 406 aaKnown RBP7.64□□□□□ -1.19
CPNE3-203ENST00000517490 RBM6P78332 1123 aaKnown RBP7.64□□□□□ -1.19
CPNE3-203ENST00000517490 SKIDA1Q1XH10 827 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 RRP12Q5JTH9 1297 aaKnown RBP7.64□□□□□ -1.19
CPNE3-203ENST00000517490 ANO1Q5XXA6 986 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 KLHL10Q6JEL2 608 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 KIAA1328Q86T90 577 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 YEATS2Q9ULM3 1422 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 PHLPP2Q6ZVD8 1323 aa7.64□□□□□ -1.19
CPNE3-203ENST00000517490 A0A1W2PQ27 194 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 A0A1W2PQ64 194 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 A0A1W2PQD8 194 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 GTF2A1P52655 376 aaPredicted RBP7.63□□□□□ -1.19
CPNE3-203ENST00000517490 RESTQ13127 1097 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 SMC1AQ14683 1233 aaKnown RBP7.63□□□□□ -1.19
CPNE3-203ENST00000517490 ANKRD13DQ6ZTN6 518 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 FCHSD1Q86WN1 690 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 C10orf67Q8IYJ2 551 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 RNF113AO15541 343 aaKnown RBP7.63□□□□□ -1.19
CPNE3-203ENST00000517490 PRC1O43663 620 aa7.63□□□□□ -1.19
CPNE3-203ENST00000517490 ATP5JP18859 108 aa7.63□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms