RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 IRS2Q9Y4H2 1338 aa17.72■□□□□ 0.43
PDGFRB-202ENST00000517488 FMR1Q06787 632 aaKnown RBP eCLIP17.71■□□□□ 0.43
PDGFRB-202ENST00000517488 TBC1D10BQ4KMP7 808 aaPredicted RBP17.71■□□□□ 0.43
PDGFRB-202ENST00000517488 KLRG1Q96E93 195 aa17.71■□□□□ 0.43
PDGFRB-202ENST00000517488 CREBZFQ9NS37 354 aa17.71■□□□□ 0.43
PDGFRB-202ENST00000517488 TNNQ9UQP3 1299 aa17.71■□□□□ 0.43
PDGFRB-202ENST00000517488 RBM26Q5T8P6 1007 aaKnown RBP17.7■□□□□ 0.42
PDGFRB-202ENST00000517488 KLHDC4Q8TBB5 520 aa17.7■□□□□ 0.42
PDGFRB-202ENST00000517488 FRAT1Q92837 279 aaPredicted RBP17.7■□□□□ 0.42
PDGFRB-202ENST00000517488 GMLQ99445 158 aa17.7■□□□□ 0.42
PDGFRB-202ENST00000517488 MXD3Q9BW11 206 aa17.7■□□□□ 0.42
PDGFRB-202ENST00000517488 PGAP2Q9UHJ9 254 aa17.7■□□□□ 0.42
PDGFRB-202ENST00000517488 RIPOR2Q9Y4F9 1068 aa17.7■□□□□ 0.42
PDGFRB-202ENST00000517488 SPEF2Q9C093 1822 aa17.7■□□□□ 0.42
PDGFRB-202ENST00000517488 SCN9AQ15858 1988 aa17.7■□□□□ 0.42
PDGFRB-202ENST00000517488 TRAF5O00463 557 aa17.69■□□□□ 0.42
PDGFRB-202ENST00000517488 IPO8O15397 1037 aaKnown RBP17.69■□□□□ 0.42
PDGFRB-202ENST00000517488 UBTFL1P0CB47 393 aaPredicted RBP17.69■□□□□ 0.42
PDGFRB-202ENST00000517488 TRIM27P14373 513 aa17.69■□□□□ 0.42
PDGFRB-202ENST00000517488 LRRC24Q50LG9 513 aa17.69■□□□□ 0.42
PDGFRB-202ENST00000517488 DACT2Q5SW24 774 aa17.69■□□□□ 0.42
PDGFRB-202ENST00000517488 INTS3Q68E01 1043 aaKnown RBP17.69■□□□□ 0.42
PDGFRB-202ENST00000517488 C15orf52Q6ZUT6 534 aaKnown RBP17.69■□□□□ 0.42
PDGFRB-202ENST00000517488 AGBL3Q8NEM8 1001 aa17.69■□□□□ 0.42
PDGFRB-202ENST00000517488 FBXW7Q969H0 707 aa17.69■□□□□ 0.42
PDGFRB-202ENST00000517488 MEIS3Q99687 375 aa17.69■□□□□ 0.42
PDGFRB-202ENST00000517488 TMEM88BA6NKF7 163 aa17.68■□□□□ 0.42
PDGFRB-202ENST00000517488 ATF7IPQ6VMQ6 1270 aa17.68■□□□□ 0.42
PDGFRB-202ENST00000517488 ZC3H15Q8WU90 426 aaKnown RBP17.68■□□□□ 0.42
PDGFRB-202ENST00000517488 GLIS2Q9BZE0 524 aaPredicted RBP17.68■□□□□ 0.42
PDGFRB-202ENST00000517488 CD209Q9NNX6 404 aa17.68■□□□□ 0.42
PDGFRB-202ENST00000517488 RFX5P48382 616 aaPredicted RBP17.67■□□□□ 0.42
PDGFRB-202ENST00000517488 ZNF280AP59817 542 aaPredicted RBP17.67■□□□□ 0.42
PDGFRB-202ENST00000517488 STRIP1Q5VSL9 837 aa17.67■□□□□ 0.42
PDGFRB-202ENST00000517488 LRRFIP2Q9Y608 721 aaKnown RBP17.67■□□□□ 0.42
PDGFRB-202ENST00000517488 ZNF609O15014 1411 aa17.66■□□□□ 0.42
PDGFRB-202ENST00000517488 USP17L8P0C7I0 530 aa17.66■□□□□ 0.42
PDGFRB-202ENST00000517488 GTF2IP78347 998 aa17.66■□□□□ 0.42
PDGFRB-202ENST00000517488 KIF4BQ2VIQ3 1234 aa17.66■□□□□ 0.42
PDGFRB-202ENST00000517488 TTLL5Q6EMB2 1281 aa17.66■□□□□ 0.42
PDGFRB-202ENST00000517488 CLUAP1Q96AJ1 413 aa17.66■□□□□ 0.42
PDGFRB-202ENST00000517488 MKRN1Q9UHC7 482 aaKnown RBP17.66■□□□□ 0.42
PDGFRB-202ENST00000517488 MROH5Q6ZUA9 1318 aa17.66■□□□□ 0.42
PDGFRB-202ENST00000517488 UBE4AQ14139 1066 aa17.65■□□□□ 0.42
PDGFRB-202ENST00000517488 METTL24Q5JXM2 366 aa17.65■□□□□ 0.42
PDGFRB-202ENST00000517488 CST9Q5W186 159 aa17.65■□□□□ 0.42
PDGFRB-202ENST00000517488 DLK2Q6UY11 383 aa17.65■□□□□ 0.42
PDGFRB-202ENST00000517488 ASTN2O75129 1339 aaPredicted RBP17.65■□□□□ 0.42
PDGFRB-202ENST00000517488 PCNTO95613 3336 aa17.64■□□□□ 0.41
PDGFRB-202ENST00000517488 IL1R1P14778 569 aa17.64■□□□□ 0.41
PDGFRB-202ENST00000517488 PTPN12Q05209 780 aaKnown RBP17.64■□□□□ 0.41
PDGFRB-202ENST00000517488 ZKSCAN2Q63HK3 967 aa17.64■□□□□ 0.41
PDGFRB-202ENST00000517488 CDC37L1Q7L3B6 337 aa17.64■□□□□ 0.41
PDGFRB-202ENST00000517488 ZNF804AQ7Z570 1209 aa17.64■□□□□ 0.41
PDGFRB-202ENST00000517488 USP48Q86UV5 1035 aa17.64■□□□□ 0.41
PDGFRB-202ENST00000517488 JMYQ8N9B5 988 aa17.64■□□□□ 0.41
PDGFRB-202ENST00000517488 GYG1P46976 350 aa17.63■□□□□ 0.41
PDGFRB-202ENST00000517488 VGLL2Q8N8G2 317 aa17.63■□□□□ 0.41
PDGFRB-202ENST00000517488 FAM84BQ96KN1 310 aaPredicted RBP17.63■□□□□ 0.41
PDGFRB-202ENST00000517488 MYOZ2Q9NPC6 264 aa17.63■□□□□ 0.41
PDGFRB-202ENST00000517488 EYA2O00167 538 aa17.62■□□□□ 0.41
PDGFRB-202ENST00000517488 PDE8BO95263 885 aa17.62■□□□□ 0.41
PDGFRB-202ENST00000517488 GNAI3P08754 354 aa17.62■□□□□ 0.41
PDGFRB-202ENST00000517488 SCARF1Q14162 830 aa17.62■□□□□ 0.41
PDGFRB-202ENST00000517488 CERS5Q8N5B7 392 aa17.62■□□□□ 0.41
PDGFRB-202ENST00000517488 TMEM57Q8N5G2 664 aa17.62■□□□□ 0.41
PDGFRB-202ENST00000517488 HDAC5Q9UQL6 1122 aa17.62■□□□□ 0.41
PDGFRB-202ENST00000517488 JAG2Q9Y219 1238 aa17.62■□□□□ 0.41
PDGFRB-202ENST00000517488 CNTNAP1P78357 1384 aa17.62■□□□□ 0.41
PDGFRB-202ENST00000517488 ADM5C9JUS6 153 aa17.61■□□□□ 0.41
PDGFRB-202ENST00000517488 CELF2O95319 508 aaKnown RBP17.61■□□□□ 0.41
PDGFRB-202ENST00000517488 HIBADHP31937 336 aaKnown RBP17.61■□□□□ 0.41
PDGFRB-202ENST00000517488 ATG9AQ7Z3C6 839 aa17.61■□□□□ 0.41
PDGFRB-202ENST00000517488 KRT26Q7Z3Y9 468 aa17.61■□□□□ 0.41
PDGFRB-202ENST00000517488 KIAA0825Q8IV33 1275 aa17.61■□□□□ 0.41
PDGFRB-202ENST00000517488 GGA3Q9NZ52 723 aa17.61■□□□□ 0.41
PDGFRB-202ENST00000517488 ABT1Q9ULW3 272 aaKnown RBP17.61■□□□□ 0.41
PDGFRB-202ENST00000517488 MYO3BQ8WXR4 1341 aa17.61■□□□□ 0.41
PDGFRB-202ENST00000517488 FBXO33Q7Z6M2 555 aa17.6■□□□□ 0.41
PDGFRB-202ENST00000517488 OGFOD1Q8N543 542 aa17.6■□□□□ 0.41
PDGFRB-202ENST00000517488 TDRD7Q8NHU6 1098 aaKnown RBP17.6■□□□□ 0.41
PDGFRB-202ENST00000517488 DCPSQ96C86 337 aaKnown RBP17.6■□□□□ 0.41
PDGFRB-202ENST00000517488 SIL1Q9H173 461 aa17.6■□□□□ 0.41
PDGFRB-202ENST00000517488 ZNF408Q9H9D4 720 aa17.6■□□□□ 0.41
PDGFRB-202ENST00000517488 PA2G4Q9UQ80 394 aaKnown RBP17.6■□□□□ 0.41
PDGFRB-202ENST00000517488 RASSF10A6NK89 507 aa17.59■□□□□ 0.41
PDGFRB-202ENST00000517488 SASH1O94885 1247 aa17.59■□□□□ 0.41
PDGFRB-202ENST00000517488 RLBP1P12271 317 aa17.59■□□□□ 0.41
PDGFRB-202ENST00000517488 FGFR2P21802 821 aa17.59■□□□□ 0.41
PDGFRB-202ENST00000517488 VEGFBP49765 207 aa17.59■□□□□ 0.41
PDGFRB-202ENST00000517488 NBPF9Q3BBW0 867 aa17.59■□□□□ 0.41
PDGFRB-202ENST00000517488 ANGEL2Q5VTE6 544 aaKnown RBP17.59■□□□□ 0.41
PDGFRB-202ENST00000517488 PUM3Q15397 648 aaKnown RBP17.58■□□□□ 0.4
PDGFRB-202ENST00000517488 DEFB115Q30KQ5 88 aa17.58■□□□□ 0.4
PDGFRB-202ENST00000517488 SCAF8Q9UPN6 1271 aaKnown RBP17.58■□□□□ 0.4
PDGFRB-202ENST00000517488 FAM205AQ6ZU69 1335 aa17.57■□□□□ 0.4
PDGFRB-202ENST00000517488 F8W031 263 aaPredicted RBP17.57■□□□□ 0.4
PDGFRB-202ENST00000517488 WNT10BO00744 389 aa17.57■□□□□ 0.4
PDGFRB-202ENST00000517488 SRGAP3O43295 1099 aa17.57■□□□□ 0.4
PDGFRB-202ENST00000517488 CIAO1O76071 339 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms