RNA–Protein interactions for RNA: ENST00000517275.3

RNU6-840P-201, Transcript of RNA, U6 small nuclear 840, pseudogene, humanhuman

BASIC

Gene RNU6-840P, Length 65 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-840P-201ENST00000517275 GTF2F1P35269 517 aaKnown RBP eCLIP5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 LIG3P49916 1009 aa5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 FCGRTP55899 365 aa5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 GIMAP6Q6P9H5 292 aa5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 CCDC84Q86UT8 332 aaPredicted RBP5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 PHC3Q8NDX5 983 aa5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 MKL1Q969V6 931 aa5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 GAS2L1Q99501 681 aaPredicted RBP5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 OSBPL2Q9H1P3 480 aa5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 STRN4Q9NRL3 753 aa5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.07□□□□□ -1.6
RNU6-840P-201ENST00000517275 ENC1O14682 589 aa5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 KHNYNO15037 678 aaKnown RBP5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 MAN1A2O60476 641 aa5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 STK10O94804 968 aaKnown RBP5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 EIF4A3P38919 411 aaKnown RBP5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 LMNB2Q03252 620 aa5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 PTSQ03393 145 aa5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 PCSK7Q16549 785 aa5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 COL13A1Q5TAT6 717 aaPredicted RBP5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 SCARA3Q6AZY7 606 aa5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 DTHD1Q6ZMT9 781 aa5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 AGMOQ6ZNB7 445 aa5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 DHX32Q7L7V1 743 aaKnown RBP5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 RELL1Q8IUW5 271 aa5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 ZNF837Q96EG3 531 aaPredicted RBP5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 NECAB3Q96P71 396 aaPredicted RBP5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 OSMRQ99650 979 aa5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 ZNF576Q9H609 170 aa5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 ATP13A2Q9NQ11 1180 aa5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 AVENQ9NQS1 362 aaPredicted RBP5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 TBX22Q9Y458 520 aa5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 SUPT16HQ9Y5B9 1047 aaKnown RBP5.06□□□□□ -1.6
RNU6-840P-201ENST00000517275 GRIA4P48058 902 aa5.05□□□□□ -1.6
RNU6-840P-201ENST00000517275 NEUROD1Q13562 356 aa5.05□□□□□ -1.6
RNU6-840P-201ENST00000517275 CCDC144BQ3MJ40 725 aa5.05□□□□□ -1.6
RNU6-840P-201ENST00000517275 PKDCCQ504Y2 493 aa5.05□□□□□ -1.6
RNU6-840P-201ENST00000517275 NCAPG2Q86XI2 1143 aa5.05□□□□□ -1.6
RNU6-840P-201ENST00000517275 KIFC2Q96AC6 838 aa5.05□□□□□ -1.6
RNU6-840P-201ENST00000517275 EAF1Q96JC9 268 aaPredicted RBP5.05□□□□□ -1.6
RNU6-840P-201ENST00000517275 PNMA5Q96PV4 448 aa5.05□□□□□ -1.6
RNU6-840P-201ENST00000517275 PHF24Q9UPV7 400 aa5.05□□□□□ -1.6
RNU6-840P-201ENST00000517275 TMA7Q9Y2S6 64 aaKnown RBP5.05□□□□□ -1.6
RNU6-840P-201ENST00000517275 ROBO2Q9HCK4 1378 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 SIN3BO75182 1162 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 CELA3AP09093 270 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 ITGA6P23229 1130 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 NFX1Q12986 1120 aaKnown RBP5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 GRIN2CQ14957 1233 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 LAPTM4AQ15012 233 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 DBN1Q16643 649 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 ZNF746Q6NUN9 644 aaPredicted RBP5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 FBXL19Q6PCT2 694 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 FAM196AQ6ZSG2 479 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 KRT25Q7Z3Z0 450 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 SLITRK4Q8IW52 837 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 TRIM42Q8IWZ5 723 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 CCDC155Q8N6L0 562 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 ZNF296Q8WUU4 475 aaPredicted RBP5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 NXPE3Q969Y0 559 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 SLC30A3Q99726 388 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 MDFIQ99750 246 aa5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 TRIM56Q9BRZ2 755 aaKnown RBP5.04□□□□□ -1.6
RNU6-840P-201ENST00000517275 A0A096LPE4 126 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 A0A1W2PPZ6 126 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 TLDC2A0PJX2 215 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 B3GALT4O96024 378 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 ACPPP15309 386 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 FGFR3P22607 806 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 GBP2P32456 591 aaPredicted RBP5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 NFE2L2Q16236 605 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 ZNF468Q5VIY5 522 aaPredicted RBP5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 PCNX4Q63HM2 1172 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 LRP10Q7Z4F1 713 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 CKAP2LQ8IYA6 745 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 TNFRSF25Q93038 417 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 ABHD17AQ96GS6 310 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 PBX4Q9BYU1 374 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 ZNF408Q9H9D4 720 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 SENP2Q9HC62 589 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 AAASQ9NRG9 546 aa5.03□□□□□ -1.6
RNU6-840P-201ENST00000517275 PDE2AO00408 941 aaPredicted RBP5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 KLF4O43474 513 aa5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 NASPP49321 788 aaPredicted RBP5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 FAAP100Q0VG06 881 aa5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 CAMK2GQ13555 558 aaPredicted RBP5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 TTBK2Q6IQ55 1244 aa5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 RIPOR1Q6ZS17 1223 aa5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 BHMTQ93088 406 aa5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 SPACA7Q96KW9 195 aa5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 TRIM47Q96LD4 638 aa5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 CLEC4MQ9H2X3 399 aaPredicted RBP5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 PIF1Q9H611 641 aa5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 SEC31BQ9NQW1 1179 aa5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 GINM1Q9NU53 330 aa5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 FRRS1LQ9P0K9 344 aa5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 SOX13Q9UN79 622 aa5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 AKAP2Q9Y2D5 859 aa5.02□□□□□ -1.61
RNU6-840P-201ENST00000517275 LOC102724428A0A0B4J2F2 783 aa5.01□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms