RNA–Protein interactions for RNA: ENST00000515662.6

THUMPD3-210, Transcript of THUMP domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene THUMPD3, Length 2,390 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-210ENST00000515662 ZFYP08048 801 aaPredicted RBP18.49■□□□□ 0.55
THUMPD3-210ENST00000515662 CCDC102BQ68D86 513 aa18.49■□□□□ 0.55
THUMPD3-210ENST00000515662 MAST3O60307 1309 aa18.49■□□□□ 0.55
THUMPD3-210ENST00000515662 PKP1Q13835 747 aa18.48■□□□□ 0.55
THUMPD3-210ENST00000515662 SETDB2Q96T68 719 aa18.48■□□□□ 0.55
THUMPD3-210ENST00000515662 COL24A1Q17RW2 1714 aa18.48■□□□□ 0.55
THUMPD3-210ENST00000515662 AKAP11Q9UKA4 1901 aa18.48■□□□□ 0.55
THUMPD3-210ENST00000515662 COL4A1P02462 1669 aa18.48■□□□□ 0.55
THUMPD3-210ENST00000515662 SLC5A1P13866 664 aa18.48■□□□□ 0.55
THUMPD3-210ENST00000515662 ARID4AP29374 1257 aaPredicted RBP18.48■□□□□ 0.55
THUMPD3-210ENST00000515662 PHKA1P46020 1223 aa18.48■□□□□ 0.55
THUMPD3-210ENST00000515662 CLEC17AQ6ZS10 378 aa18.48■□□□□ 0.55
THUMPD3-210ENST00000515662 CDC5LQ99459 802 aaKnown RBP18.48■□□□□ 0.55
THUMPD3-210ENST00000515662 NYXQ9GZU5 481 aa18.48■□□□□ 0.55
THUMPD3-210ENST00000515662 DDX11L8A8MPP1 907 aa18.47■□□□□ 0.55
THUMPD3-210ENST00000515662 UQCRFS1P1P0C7P4 283 aa18.47■□□□□ 0.55
THUMPD3-210ENST00000515662 DSCC1Q9BVC3 393 aa18.47■□□□□ 0.55
THUMPD3-210ENST00000515662 LRRC4BQ9NT99 713 aa18.47■□□□□ 0.55
THUMPD3-210ENST00000515662 M0R2C6 588 aa18.47■□□□□ 0.55
THUMPD3-210ENST00000515662 GTF2E1P29083 439 aaPredicted RBP18.47■□□□□ 0.55
THUMPD3-210ENST00000515662 OSBP2Q969R2 916 aa18.47■□□□□ 0.55
THUMPD3-210ENST00000515662 KRT32Q14532 448 aa18.46■□□□□ 0.55
THUMPD3-210ENST00000515662 FAM196AQ6ZSG2 479 aa18.46■□□□□ 0.55
THUMPD3-210ENST00000515662 LARP6Q9BRS8 491 aaKnown RBP18.46■□□□□ 0.55
THUMPD3-210ENST00000515662 SNAP23O00161 211 aa18.46■□□□□ 0.55
THUMPD3-210ENST00000515662 COL9A3Q14050 684 aaPredicted RBP18.46■□□□□ 0.55
THUMPD3-210ENST00000515662 BLOC1S2Q6QNY1 142 aa18.46■□□□□ 0.55
THUMPD3-210ENST00000515662 KRT27Q7Z3Y8 459 aa18.46■□□□□ 0.55
THUMPD3-210ENST00000515662 NBPF5PQ86XG9 351 aaPredicted RBP18.46■□□□□ 0.55
THUMPD3-210ENST00000515662 ZDHHC9Q9Y397 364 aa18.46■□□□□ 0.55
THUMPD3-210ENST00000515662 CASZ1Q86V15 1759 aa18.46■□□□□ 0.55
THUMPD3-210ENST00000515662 C4AP0C0L4 1744 aa18.46■□□□□ 0.54
THUMPD3-210ENST00000515662 CYP21A2P08686 494 aa18.45■□□□□ 0.54
THUMPD3-210ENST00000515662 HSPD1P10809 573 aaKnown RBP18.45■□□□□ 0.54
THUMPD3-210ENST00000515662 RPS6KB1P23443 525 aa18.45■□□□□ 0.54
THUMPD3-210ENST00000515662 CHRNDQ07001 517 aa18.45■□□□□ 0.54
THUMPD3-210ENST00000515662 TTF1Q15361 905 aaPredicted RBP18.45■□□□□ 0.54
THUMPD3-210ENST00000515662 TRAPPC3LQ5T215 181 aa18.45■□□□□ 0.54
THUMPD3-210ENST00000515662 ANKRD18AQ8IVF6 992 aa18.45■□□□□ 0.54
THUMPD3-210ENST00000515662 ALDH8A1Q9H2A2 487 aaPredicted RBP18.45■□□□□ 0.54
THUMPD3-210ENST00000515662 BRWD3Q6RI45 1802 aa18.44■□□□□ 0.54
THUMPD3-210ENST00000515662 RFC4P35249 363 aa18.44■□□□□ 0.54
THUMPD3-210ENST00000515662 WASHC4Q2M389 1173 aa18.44■□□□□ 0.54
THUMPD3-210ENST00000515662 APPBP2Q92624 585 aa18.44■□□□□ 0.54
THUMPD3-210ENST00000515662 ZSCAN31Q96LW9 406 aaPredicted RBP18.44■□□□□ 0.54
THUMPD3-210ENST00000515662 DDX24Q9GZR7 859 aaKnown RBP eCLIP18.44■□□□□ 0.54
THUMPD3-210ENST00000515662 PIH1D3Q9NQM4 214 aaKnown RBP18.44■□□□□ 0.54
THUMPD3-210ENST00000515662 PHF14O94880 888 aa18.44■□□□□ 0.54
THUMPD3-210ENST00000515662 BAG4O95429 457 aaKnown RBP18.44■□□□□ 0.54
THUMPD3-210ENST00000515662 LARGE1O95461 756 aa18.43■□□□□ 0.54
THUMPD3-210ENST00000515662 TPTE2Q6XPS3 522 aa18.43■□□□□ 0.54
THUMPD3-210ENST00000515662 SH2B1Q9NRF2 756 aaPredicted RBP18.43■□□□□ 0.54
THUMPD3-210ENST00000515662 ZSCAN25Q6NSZ9 544 aa18.42■□□□□ 0.54
THUMPD3-210ENST00000515662 NEK1Q96PY6 1258 aa18.42■□□□□ 0.54
THUMPD3-210ENST00000515662 BSDC1Q9NW68 430 aaPredicted RBP18.42■□□□□ 0.54
THUMPD3-210ENST00000515662 MYH7P12883 1935 aa18.42■□□□□ 0.54
THUMPD3-210ENST00000515662 ADD2P35612 726 aa18.42■□□□□ 0.54
THUMPD3-210ENST00000515662 SPATA5Q8NB90 893 aa18.42■□□□□ 0.54
THUMPD3-210ENST00000515662 NLRP3Q96P20 1036 aa18.42■□□□□ 0.54
THUMPD3-210ENST00000515662 ADRA2BP18089 450 aa18.41■□□□□ 0.54
THUMPD3-210ENST00000515662 RASGRF1Q13972 1273 aa18.41■□□□□ 0.54
THUMPD3-210ENST00000515662 PUS7LQ9H0K6 701 aaKnown RBP18.41■□□□□ 0.54
THUMPD3-210ENST00000515662 TRAK2O60296 914 aa18.41■□□□□ 0.54
THUMPD3-210ENST00000515662 ANKRD1Q15327 319 aa18.41■□□□□ 0.54
THUMPD3-210ENST00000515662 SLC27A3Q5K4L6 730 aa18.41■□□□□ 0.54
THUMPD3-210ENST00000515662 SLC9C2Q5TAH2 1124 aa18.41■□□□□ 0.54
THUMPD3-210ENST00000515662 TPCN1Q9ULQ1 816 aa18.41■□□□□ 0.54
THUMPD3-210ENST00000515662 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.41■□□□□ 0.54
THUMPD3-210ENST00000515662 FOXP2O15409 715 aa18.4■□□□□ 0.54
THUMPD3-210ENST00000515662 TRIM37O94972 964 aa18.4■□□□□ 0.54
THUMPD3-210ENST00000515662 BRD1O95696 1058 aa18.4■□□□□ 0.54
THUMPD3-210ENST00000515662 BCAMP50895 628 aa18.4■□□□□ 0.54
THUMPD3-210ENST00000515662 ME3Q16798 604 aa18.4■□□□□ 0.54
THUMPD3-210ENST00000515662 CELF1Q92879 486 aaKnown RBP18.4■□□□□ 0.54
THUMPD3-210ENST00000515662 TCEANC2Q96MN5 208 aa18.4■□□□□ 0.54
THUMPD3-210ENST00000515662 TAF1P21675 1872 aa18.4■□□□□ 0.54
THUMPD3-210ENST00000515662 A0A1B0GUL6 1792 aa18.4■□□□□ 0.54
THUMPD3-210ENST00000515662 IDH1O75874 414 aaKnown RBP18.4■□□□□ 0.54
THUMPD3-210ENST00000515662 PTMSP20962 102 aa18.4■□□□□ 0.54
THUMPD3-210ENST00000515662 TOB2Q14106 344 aaPredicted RBP18.4■□□□□ 0.54
THUMPD3-210ENST00000515662 STOX1Q6ZVD7 989 aa18.4■□□□□ 0.54
THUMPD3-210ENST00000515662 UBE3CQ15386 1083 aa18.39■□□□□ 0.53
THUMPD3-210ENST00000515662 CCDC24Q8N4L8 307 aa18.39■□□□□ 0.53
THUMPD3-210ENST00000515662 MINPP1Q9UNW1 487 aa18.39■□□□□ 0.53
THUMPD3-210ENST00000515662 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.39■□□□□ 0.53
THUMPD3-210ENST00000515662 NFIXQ14938 502 aa18.39■□□□□ 0.53
THUMPD3-210ENST00000515662 CCDC83Q8IWF9 413 aa18.39■□□□□ 0.53
THUMPD3-210ENST00000515662 UBR3Q6ZT12 1888 aa18.38■□□□□ 0.53
THUMPD3-210ENST00000515662 CARMIL3Q8ND23 1372 aa18.38■□□□□ 0.53
THUMPD3-210ENST00000515662 A0A0G2JLW4 131 aa18.38■□□□□ 0.53
THUMPD3-210ENST00000515662 GPAA1O43292 621 aa18.38■□□□□ 0.53
THUMPD3-210ENST00000515662 PDE6AP16499 860 aa18.38■□□□□ 0.53
THUMPD3-210ENST00000515662 ST3GAL1Q11201 340 aa18.38■□□□□ 0.53
THUMPD3-210ENST00000515662 GOLGA6L22H0YM25 854 aa18.38■□□□□ 0.53
THUMPD3-210ENST00000515662 RPS8P62241 208 aaKnown RBP18.38■□□□□ 0.53
THUMPD3-210ENST00000515662 UBE4AQ14139 1066 aa18.38■□□□□ 0.53
THUMPD3-210ENST00000515662 TTLL5Q6EMB2 1281 aa18.38■□□□□ 0.53
THUMPD3-210ENST00000515662 CTNNA3Q9UI47 895 aa18.38■□□□□ 0.53
THUMPD3-210ENST00000515662 WWC3Q9ULE0 1092 aa18.38■□□□□ 0.53
THUMPD3-210ENST00000515662 MYO5AQ9Y4I1 1855 aaKnown RBP18.37■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms