RNA–Protein interactions for RNA: ENST00000515562.1

DDX41-217, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 1,184 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-217ENST00000515562 WTIPA6NIX2 430 aaPredicted RBP22.16■■□□□ 1.14
DDX41-217ENST00000515562 CTCFP49711 727 aaPredicted RBP22.16■■□□□ 1.14
DDX41-217ENST00000515562 FOXO4P98177 505 aa22.16■■□□□ 1.14
DDX41-217ENST00000515562 CYP4F22Q6NT55 531 aa22.16■■□□□ 1.14
DDX41-217ENST00000515562 GMLQ99445 158 aa22.16■■□□□ 1.14
DDX41-217ENST00000515562 SRCIN1Q9C0H9 1055 aa22.16■■□□□ 1.14
DDX41-217ENST00000515562 CHMP3Q9Y3E7 222 aa22.16■■□□□ 1.14
DDX41-217ENST00000515562 A0A1B0GUL6 1792 aa22.15■■□□□ 1.14
DDX41-217ENST00000515562 MYO3BQ8WXR4 1341 aa22.15■■□□□ 1.14
DDX41-217ENST00000515562 USP17L8P0C7I0 530 aa22.15■■□□□ 1.14
DDX41-217ENST00000515562 KCNJ4P48050 445 aa22.15■■□□□ 1.14
DDX41-217ENST00000515562 CHRNDQ07001 517 aa22.15■■□□□ 1.14
DDX41-217ENST00000515562 SLC4A10Q6U841 1118 aa22.15■■□□□ 1.14
DDX41-217ENST00000515562 GGA3Q9NZ52 723 aa22.15■■□□□ 1.14
DDX41-217ENST00000515562 C9orf78Q9NZ63 289 aaPredicted RBP22.15■■□□□ 1.14
DDX41-217ENST00000515562 GRM1Q13255 1194 aa22.14■■□□□ 1.13
DDX41-217ENST00000515562 SULF1Q8IWU6 871 aa22.14■■□□□ 1.13
DDX41-217ENST00000515562 PRDM10Q9NQV6 1147 aa22.14■■□□□ 1.13
DDX41-217ENST00000515562 CCDC57Q2TAC2 916 aa22.13■■□□□ 1.13
DDX41-217ENST00000515562 DACT2Q5SW24 774 aa22.13■■□□□ 1.13
DDX41-217ENST00000515562 STRIP1Q5VSL9 837 aa22.13■■□□□ 1.13
DDX41-217ENST00000515562 LMBR1LQ6UX01 489 aa22.13■■□□□ 1.13
DDX41-217ENST00000515562 MYOZ2Q9NPC6 264 aa22.13■■□□□ 1.13
DDX41-217ENST00000515562 PTPRCP08575 1304 aa22.12■■□□□ 1.13
DDX41-217ENST00000515562 ADM5C9JUS6 153 aa22.12■■□□□ 1.13
DDX41-217ENST00000515562 MAP2K2P36507 400 aa22.12■■□□□ 1.13
DDX41-217ENST00000515562 TXNRD3Q86VQ6 643 aa22.12■■□□□ 1.13
DDX41-217ENST00000515562 FBXW7Q969H0 707 aa22.12■■□□□ 1.13
DDX41-217ENST00000515562 BEGAINQ9BUH8 593 aa22.12■■□□□ 1.13
DDX41-217ENST00000515562 POLR2AP24928 1970 aaKnown RBP22.12■■□□□ 1.13
DDX41-217ENST00000515562 TAF7LQ5H9L4 462 aa22.11■■□□□ 1.13
DDX41-217ENST00000515562 OGFOD1Q8N543 542 aa22.11■■□□□ 1.13
DDX41-217ENST00000515562 PITPNM2Q9BZ72 1349 aa22.1■■□□□ 1.13
DDX41-217ENST00000515562 KLRK1P26718 216 aa22.1■■□□□ 1.13
DDX41-217ENST00000515562 MMP14P50281 582 aa22.1■■□□□ 1.13
DDX41-217ENST00000515562 SLFN5Q08AF3 891 aa22.1■■□□□ 1.13
DDX41-217ENST00000515562 SCARF1Q14162 830 aa22.1■■□□□ 1.13
DDX41-217ENST00000515562 EPHA10Q5JZY3 1008 aa22.1■■□□□ 1.13
DDX41-217ENST00000515562 ANGEL2Q5VTE6 544 aaKnown RBP22.1■■□□□ 1.13
DDX41-217ENST00000515562 MRPL50Q8N5N7 158 aaKnown RBP22.1■■□□□ 1.13
DDX41-217ENST00000515562 GBA2Q9HCG7 927 aaPredicted RBP22.1■■□□□ 1.13
DDX41-217ENST00000515562 HUNKP57058 714 aa22.09■■□□□ 1.13
DDX41-217ENST00000515562 C15orf52Q6ZUT6 534 aaKnown RBP22.09■■□□□ 1.13
DDX41-217ENST00000515562 C2orf69Q8N8R5 385 aa22.09■■□□□ 1.13
DDX41-217ENST00000515562 ASTN2O75129 1339 aaPredicted RBP22.08■■□□□ 1.13
DDX41-217ENST00000515562 CCER2I3L3R5 266 aa22.08■■□□□ 1.13
DDX41-217ENST00000515562 DLK2Q6UY11 383 aa22.08■■□□□ 1.13
DDX41-217ENST00000515562 LDHAL6AQ6ZMR3 332 aa22.08■■□□□ 1.13
DDX41-217ENST00000515562 UTYO14607 1347 aa22.07■■□□□ 1.12
DDX41-217ENST00000515562 AOC2O75106 756 aa22.07■■□□□ 1.12
DDX41-217ENST00000515562 TAF5LO75529 589 aa22.07■■□□□ 1.12
DDX41-217ENST00000515562 HSPA8P11142 646 aaKnown RBP22.07■■□□□ 1.12
DDX41-217ENST00000515562 LBX1P52954 281 aa22.07■■□□□ 1.12
DDX41-217ENST00000515562 TTLL5Q6EMB2 1281 aa22.07■■□□□ 1.12
DDX41-217ENST00000515562 SSH1Q8WYL5 1049 aa22.07■■□□□ 1.12
DDX41-217ENST00000515562 CDCA5Q96FF9 252 aa22.07■■□□□ 1.12
DDX41-217ENST00000515562 CNNM1Q9NRU3 951 aa22.07■■□□□ 1.12
DDX41-217ENST00000515562 IRS2Q9Y4H2 1338 aa22.06■■□□□ 1.12
DDX41-217ENST00000515562 BRPF1P55201 1214 aaPredicted RBP22.06■■□□□ 1.12
DDX41-217ENST00000515562 NOGQ13253 232 aa22.06■■□□□ 1.12
DDX41-217ENST00000515562 ZNF804AQ7Z570 1209 aa22.06■■□□□ 1.12
DDX41-217ENST00000515562 HELBQ8NG08 1087 aaPredicted RBP22.06■■□□□ 1.12
DDX41-217ENST00000515562 SUCLG2Q96I99 432 aa22.06■■□□□ 1.12
DDX41-217ENST00000515562 MXD3Q9BW11 206 aa22.06■■□□□ 1.12
DDX41-217ENST00000515562 CD209Q9NNX6 404 aa22.06■■□□□ 1.12
DDX41-217ENST00000515562 CA12O43570 354 aa22.05■■□□□ 1.12
DDX41-217ENST00000515562 NBPF7P0C2Y1 421 aaPredicted RBP22.05■■□□□ 1.12
DDX41-217ENST00000515562 GTF2IP78347 998 aa22.05■■□□□ 1.12
DDX41-217ENST00000515562 ALDH1L2Q3SY69 923 aa22.05■■□□□ 1.12
DDX41-217ENST00000515562 ZNF594Q96JF6 807 aaPredicted RBP22.05■■□□□ 1.12
DDX41-217ENST00000515562 HDAC9Q9UKV0 1011 aa22.05■■□□□ 1.12
DDX41-217ENST00000515562 PAPPA2Q9BXP8 1791 aa22.04■■□□□ 1.12
DDX41-217ENST00000515562 RGMBQ6NW40 437 aa22.04■■□□□ 1.12
DDX41-217ENST00000515562 KAZALD1Q96I82 304 aa22.04■■□□□ 1.12
DDX41-217ENST00000515562 SNAP23O00161 211 aa22.03■■□□□ 1.12
DDX41-217ENST00000515562 WNT10BO00744 389 aa22.03■■□□□ 1.12
DDX41-217ENST00000515562 FKBP1BP68106 108 aa22.03■■□□□ 1.12
DDX41-217ENST00000515562 NBPF9Q3BBW0 867 aa22.03■■□□□ 1.12
DDX41-217ENST00000515562 RABL6Q3YEC7 729 aaPredicted RBP22.03■■□□□ 1.12
DDX41-217ENST00000515562 CT47B1P0C2W7 299 aaPredicted RBP22.02■■□□□ 1.12
DDX41-217ENST00000515562 IL1R1P14778 569 aa22.02■■□□□ 1.12
DDX41-217ENST00000515562 KIAA0825Q8IV33 1275 aa22.02■■□□□ 1.12
DDX41-217ENST00000515562 CCDC102AQ96A19 550 aa22.02■■□□□ 1.12
DDX41-217ENST00000515562 CDCA7LQ96GN5 454 aa22.02■■□□□ 1.12
DDX41-217ENST00000515562 BICC1Q9H694 974 aaKnown RBP22.02■■□□□ 1.12
DDX41-217ENST00000515562 SMC4Q9NTJ3 1288 aa22.02■■□□□ 1.12
DDX41-217ENST00000515562 PLIN1O60240 522 aa22.01■■□□□ 1.11
DDX41-217ENST00000515562 TRMT2AQ8IZ69 625 aaKnown RBP22.01■■□□□ 1.11
DDX41-217ENST00000515562 SASH1O94885 1247 aa22■■□□□ 1.11
DDX41-217ENST00000515562 ZNF157P51786 506 aaPredicted RBP22■■□□□ 1.11
DDX41-217ENST00000515562 UBE4AQ14139 1066 aa22■■□□□ 1.11
DDX41-217ENST00000515562 FAM155AB1AL88 458 aaPredicted RBP21.99■■□□□ 1.11
DDX41-217ENST00000515562 CAPN15O75808 1086 aa21.99■■□□□ 1.11
DDX41-217ENST00000515562 FKBP1AP62942 108 aaKnown RBP21.99■■□□□ 1.11
DDX41-217ENST00000515562 APOBEC3FQ8IUX4 373 aaKnown RBP21.99■■□□□ 1.11
DDX41-217ENST00000515562 MROH5Q6ZUA9 1318 aa21.99■■□□□ 1.11
DDX41-217ENST00000515562 COL1A1P02452 1464 aaPredicted RBP21.98■■□□□ 1.11
DDX41-217ENST00000515562 ANKRD44Q8N8A2 993 aa21.98■■□□□ 1.11
DDX41-217ENST00000515562 ECM29Q5VYK3 1845 aa21.97■■□□□ 1.11
DDX41-217ENST00000515562 SLC10A3P09131 477 aa21.97■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 93.6 ms