RNA–Protein interactions for RNA: ENST00000515332.5

SGMS2-209, Transcript of sphingomyelin synthase 2, human

TSL 3

Gene SGMS2, Length 498 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SGMS2-209	ENST00000515332	CFHR5	Q9BXR6	569 aa		31.53	■■■□□ 2.64
SGMS2-209	ENST00000515332	SASH1	O94885	1247 aa		31.52	■■■□□ 2.64
SGMS2-209	ENST00000515332	CCDC191	Q8NCU4	936 aa		31.52	■■■□□ 2.64
SGMS2-209	ENST00000515332	ARMC9	Q7Z3E5	817 aa		31.51	■■■□□ 2.63
SGMS2-209	ENST00000515332	CWC25	Q9NXE8	425 aa	Predicted RBP	31.5	■■■□□ 2.63
SGMS2-209	ENST00000515332	MED23	Q9ULK4	1368 aa		31.5	■■■□□ 2.63
SGMS2-209	ENST00000515332	MKI67	P46013	3256 aa	Known RBP	31.49	■■■□□ 2.63
SGMS2-209	ENST00000515332	HABP4	Q5JVS0	413 aa	Known RBP	31.49	■■■□□ 2.63
SGMS2-209	ENST00000515332	ZNF646	O15015	1829 aa	Predicted RBP	31.48	■■■□□ 2.63
SGMS2-209	ENST00000515332	SPRYD7	Q5W111	196 aa		31.48	■■■□□ 2.63
SGMS2-209	ENST00000515332	MBIP	Q9NS73	344 aa		31.48	■■■□□ 2.63
SGMS2-209	ENST00000515332	HTT	P42858	3142 aa		31.48	■■■□□ 2.63
SGMS2-209	ENST00000515332	RUNDC1	Q96C34	613 aa		31.47	■■■□□ 2.63
SGMS2-209	ENST00000515332	MINPP1	Q9UNW1	487 aa		31.47	■■■□□ 2.63
SGMS2-209	ENST00000515332	TRIM17	Q9Y577	477 aa		31.47	■■■□□ 2.63
SGMS2-209	ENST00000515332	MYO3B	Q8WXR4	1341 aa		31.47	■■■□□ 2.63
SGMS2-209	ENST00000515332	POTEF	A5A3E0	1075 aa		31.46	■■■□□ 2.63
SGMS2-209	ENST00000515332	LDLRAD1	Q5T700	205 aa		31.46	■■■□□ 2.63
SGMS2-209	ENST00000515332	STRIP1	Q5VSL9	837 aa		31.46	■■■□□ 2.63
SGMS2-209	ENST00000515332	CDC5L	Q99459	802 aa	Known RBP	31.46	■■■□□ 2.63
SGMS2-209	ENST00000515332	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	31.46	■■■□□ 2.63
SGMS2-209	ENST00000515332	ANGEL1	Q9UNK9	670 aa	Known RBP	31.46	■■■□□ 2.63
SGMS2-209	ENST00000515332	FZD1	Q9UP38	647 aa		31.46	■■■□□ 2.63
SGMS2-209	ENST00000515332	ALDH1A1	P00352	501 aa		31.44	■■■□□ 2.62
SGMS2-209	ENST00000515332	CCT4	P50991	539 aa	Known RBP	31.44	■■■□□ 2.62
SGMS2-209	ENST00000515332	CTSW	P56202	376 aa		31.44	■■■□□ 2.62
SGMS2-209	ENST00000515332	APOBEC3F	Q8IUX4	373 aa	Known RBP	31.44	■■■□□ 2.62
SGMS2-209	ENST00000515332	ELL2	O00472	640 aa	Predicted RBP	31.43	■■■□□ 2.62
SGMS2-209	ENST00000515332	RALBP1	Q15311	655 aa		31.43	■■■□□ 2.62
SGMS2-209	ENST00000515332	OTOP1	Q7RTM1	612 aa		31.43	■■■□□ 2.62
SGMS2-209	ENST00000515332	TXNRD3	Q86VQ6	643 aa		31.43	■■■□□ 2.62
SGMS2-209	ENST00000515332	METTL22	Q9BUU2	404 aa	Predicted RBP	31.43	■■■□□ 2.62
SGMS2-209	ENST00000515332	COA1	Q9GZY4	146 aa		31.43	■■■□□ 2.62
SGMS2-209	ENST00000515332	BSDC1	Q9NW68	430 aa	Predicted RBP	31.43	■■■□□ 2.62
SGMS2-209	ENST00000515332	SPEF2	Q9C093	1822 aa		31.42	■■■□□ 2.62
SGMS2-209	ENST00000515332	IFNL1	Q8IU54	200 aa		31.42	■■■□□ 2.62
SGMS2-209	ENST00000515332	KIAA0825	Q8IV33	1275 aa		31.41	■■■□□ 2.62
SGMS2-209	ENST00000515332	GREM2	Q9H772	168 aa		31.41	■■■□□ 2.62
SGMS2-209	ENST00000515332	MANSC4	A6NHS7	340 aa	Predicted RBP	31.4	■■■□□ 2.62
SGMS2-209	ENST00000515332	INTS3	Q68E01	1043 aa	Known RBP	31.4	■■■□□ 2.62
SGMS2-209	ENST00000515332	TTLL11	Q8NHH1	800 aa		31.4	■■■□□ 2.62
SGMS2-209	ENST00000515332	SLC10A4	Q96EP9	437 aa		31.4	■■■□□ 2.62
SGMS2-209	ENST00000515332	CENPF	P49454	3210 aa		31.39	■■■□□ 2.62
SGMS2-209	ENST00000515332	ZEB1	P37275	1124 aa	Predicted RBP	31.39	■■■□□ 2.62
SGMS2-209	ENST00000515332	TTLL5	Q6EMB2	1281 aa		31.39	■■■□□ 2.62
SGMS2-209	ENST00000515332	MMP14	P50281	582 aa		31.38	■■■□□ 2.61
SGMS2-209	ENST00000515332	ZBED3	Q96IU2	234 aa	Predicted RBP	31.38	■■■□□ 2.61
SGMS2-209	ENST00000515332	IGF2BP3	O00425	579 aa	Known RBP eCLIP	31.37	■■■□□ 2.61
SGMS2-209	ENST00000515332	INHBE	P58166	350 aa		31.37	■■■□□ 2.61
SGMS2-209	ENST00000515332	WDR43	Q15061	677 aa	Known RBP eCLIP	31.37	■■■□□ 2.61
SGMS2-209	ENST00000515332	CLMN	Q96JQ2	1002 aa		31.37	■■■□□ 2.61
SGMS2-209	ENST00000515332	MAP3K2	Q9Y2U5	619 aa		31.37	■■■□□ 2.61
SGMS2-209	ENST00000515332	DDX58	O95786	925 aa	Known RBP	31.36	■■■□□ 2.61
SGMS2-209	ENST00000515332	ZNF853	P0CG23	659 aa		31.36	■■■□□ 2.61
SGMS2-209	ENST00000515332	KLRK1	P26718	216 aa		31.36	■■■□□ 2.61
SGMS2-209	ENST00000515332	DEFB129	Q9H1M3	183 aa		31.36	■■■□□ 2.61
SGMS2-209	ENST00000515332	GTF2I	P78347	998 aa		31.35	■■■□□ 2.61
SGMS2-209	ENST00000515332	WNK4	Q96J92	1243 aa		31.35	■■■□□ 2.61
SGMS2-209	ENST00000515332	LEMD3	Q9Y2U8	911 aa		31.35	■■■□□ 2.61
SGMS2-209	ENST00000515332	ZBTB48	P10074	688 aa	Predicted RBP	31.34	■■■□□ 2.61
SGMS2-209	ENST00000515332	CD99L2	Q8TCZ2	262 aa		31.34	■■■□□ 2.61
SGMS2-209	ENST00000515332	ADAMTS8	Q9UP79	889 aa		31.34	■■■□□ 2.61
SGMS2-209	ENST00000515332	PTPN22	Q9Y2R2	807 aa		31.34	■■■□□ 2.61
SGMS2-209	ENST00000515332	COL1A1	P02452	1464 aa	Predicted RBP	31.33	■■■□□ 2.61
SGMS2-209	ENST00000515332	IGKV5-2	P06315	115 aa		31.33	■■■□□ 2.61
SGMS2-209	ENST00000515332	MAP3K11	Q16584	847 aa		31.33	■■■□□ 2.61
SGMS2-209	ENST00000515332	ERO1A	Q96HE7	468 aa		31.33	■■■□□ 2.61
SGMS2-209	ENST00000515332	SSC5D	A1L4H1	1573 aa		31.33	■■■□□ 2.61
SGMS2-209	ENST00000515332	MYH3	P11055	1940 aa		31.32	■■■□□ 2.6
SGMS2-209	ENST00000515332	ZNF804B	A4D1E1	1349 aa		31.32	■■■□□ 2.6
SGMS2-209	ENST00000515332	C8orf58	Q8NAV2	365 aa		31.32	■■■□□ 2.6
SGMS2-209	ENST00000515332	MYBBP1A	Q9BQG0	1328 aa	Known RBP	31.31	■■■□□ 2.6
SGMS2-209	ENST00000515332	RBBP6	Q7Z6E9	1792 aa	Known RBP	31.31	■■■□□ 2.6
SGMS2-209	ENST00000515332	BRCA2	P51587	3418 aa		31.31	■■■□□ 2.6
SGMS2-209	ENST00000515332	EN2	P19622	333 aa	Predicted RBP	31.31	■■■□□ 2.6
SGMS2-209	ENST00000515332	DLGAP5	Q15398	846 aa		31.31	■■■□□ 2.6
SGMS2-209	ENST00000515332	IFT57	Q9NWB7	429 aa		31.31	■■■□□ 2.6
SGMS2-209	ENST00000515332	IGHMBP2	P38935	993 aa	Known RBP	31.3	■■■□□ 2.6
SGMS2-209	ENST00000515332	PPP1R12B	O60237	982 aa	Predicted RBP	31.29	■■■□□ 2.6
SGMS2-209	ENST00000515332	CRHR2	Q13324	411 aa		31.29	■■■□□ 2.6
SGMS2-209	ENST00000515332	PCDHAC2	Q9Y5I4	1007 aa		31.29	■■■□□ 2.6
SGMS2-209	ENST00000515332	PI4KAP2	A4QPH2	592 aa		31.28	■■■□□ 2.6
SGMS2-209	ENST00000515332	FXR1	P51114	621 aa	Known RBP eCLIP	31.28	■■■□□ 2.6
SGMS2-209	ENST00000515332	GNAI1	P63096	354 aa		31.28	■■■□□ 2.6
SGMS2-209	ENST00000515332	KSR2	Q6VAB6	950 aa		31.28	■■■□□ 2.6
SGMS2-209	ENST00000515332	PI4KAP1	Q8N8J0	262 aa		31.28	■■■□□ 2.6
SGMS2-209	ENST00000515332	ARMC5	Q96C12	935 aa		31.28	■■■□□ 2.6
SGMS2-209	ENST00000515332	EFCC1	Q9HA90	598 aa		31.28	■■■□□ 2.6
SGMS2-209	ENST00000515332	KIAA0100	Q14667	2235 aa	Known RBP	31.28	■■■□□ 2.6
SGMS2-209	ENST00000515332	CWF19L2	Q2TBE0	894 aa	Known RBP	31.27	■■■□□ 2.6
SGMS2-209	ENST00000515332	CCDC30	Q5VVM6	783 aa		31.27	■■■□□ 2.6
SGMS2-209	ENST00000515332	ANKRD2	Q9GZV1	360 aa		31.27	■■■□□ 2.6
SGMS2-209	ENST00000515332	LAMB1	P07942	1786 aa		31.27	■■■□□ 2.6
SGMS2-209	ENST00000515332	GJA5	P36382	358 aa		31.26	■■■□□ 2.59
SGMS2-209	ENST00000515332	CERS5	Q8N5B7	392 aa		31.26	■■■□□ 2.59
SGMS2-209	ENST00000515332	PPP2R3B	Q9Y5P8	575 aa		31.26	■■■□□ 2.59
SGMS2-209	ENST00000515332	CLRN2	A0PK11	232 aa		31.25	■■■□□ 2.59
SGMS2-209	ENST00000515332	CAP1	Q01518	475 aa		31.25	■■■□□ 2.59
SGMS2-209	ENST00000515332	OTUD7B	Q6GQQ9	843 aa		31.25	■■■□□ 2.59
SGMS2-209	ENST00000515332	UBE3B	Q7Z3V4	1068 aa		31.25	■■■□□ 2.59

Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms