RNA–Protein interactions for RNA: ENST00000515233.5

DDR1-278, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 580 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-278ENST00000515233 CWF19L2Q2TBE0 894 aaKnown RBP19.29■□□□□ 0.68
DDR1-278ENST00000515233 TWISTNBQ3B726 338 aaPredicted RBP19.29■□□□□ 0.68
DDR1-278ENST00000515233 NCBP3Q53F19 620 aaKnown RBP19.29■□□□□ 0.68
DDR1-278ENST00000515233 TSR2Q969E8 191 aaKnown RBP19.29■□□□□ 0.68
DDR1-278ENST00000515233 CSRNP1Q96S65 589 aa19.29■□□□□ 0.68
DDR1-278ENST00000515233 RNF186Q9NXI6 227 aa19.29■□□□□ 0.68
DDR1-278ENST00000515233 SLC4A2P04920 1241 aa19.28■□□□□ 0.68
DDR1-278ENST00000515233 WWC1Q8IX03 1113 aa19.28■□□□□ 0.68
DDR1-278ENST00000515233 AKAP11Q9UKA4 1901 aa19.27■□□□□ 0.68
DDR1-278ENST00000515233 TRPA1O75762 1119 aa19.27■□□□□ 0.68
DDR1-278ENST00000515233 MMP14P50281 582 aa19.27■□□□□ 0.68
DDR1-278ENST00000515233 DACT2Q5SW24 774 aa19.27■□□□□ 0.68
DDR1-278ENST00000515233 STRIP1Q5VSL9 837 aa19.27■□□□□ 0.68
DDR1-278ENST00000515233 G2E3Q7L622 706 aa19.27■□□□□ 0.68
DDR1-278ENST00000515233 PLA2G12BQ9BX93 195 aa19.27■□□□□ 0.68
DDR1-278ENST00000515233 COA1Q9GZY4 146 aa19.27■□□□□ 0.68
DDR1-278ENST00000515233 LEMD3Q9Y2U8 911 aa19.27■□□□□ 0.68
DDR1-278ENST00000515233 IL16Q14005 1332 aa19.26■□□□□ 0.67
DDR1-278ENST00000515233 MYO3BQ8WXR4 1341 aa19.26■□□□□ 0.67
DDR1-278ENST00000515233 CSF1RP07333 972 aa19.25■□□□□ 0.67
DDR1-278ENST00000515233 IGHMBP2P38935 993 aaKnown RBP19.25■□□□□ 0.67
DDR1-278ENST00000515233 GCKRQ14397 625 aa19.25■□□□□ 0.67
DDR1-278ENST00000515233 CCDC184Q52MB2 194 aa19.25■□□□□ 0.67
DDR1-278ENST00000515233 UBE3BQ7Z3V4 1068 aa19.25■□□□□ 0.67
DDR1-278ENST00000515233 OGFOD1Q8N543 542 aa19.25■□□□□ 0.67
DDR1-278ENST00000515233 PAPPA2Q9BXP8 1791 aa19.24■□□□□ 0.67
DDR1-278ENST00000515233 ZNF646O15015 1829 aaPredicted RBP19.24■□□□□ 0.67
DDR1-278ENST00000515233 SPEF2Q9C093 1822 aa19.24■□□□□ 0.67
DDR1-278ENST00000515233 NBPF9Q3BBW0 867 aa19.24■□□□□ 0.67
DDR1-278ENST00000515233 TXNRD3Q86VQ6 643 aa19.24■□□□□ 0.67
DDR1-278ENST00000515233 RASAL3Q86YV0 1011 aa19.24■□□□□ 0.67
DDR1-278ENST00000515233 ANKRD2Q9GZV1 360 aa19.24■□□□□ 0.67
DDR1-278ENST00000515233 WNT10BO00744 389 aa19.23■□□□□ 0.67
DDR1-278ENST00000515233 ITGA6P23229 1130 aa19.23■□□□□ 0.67
DDR1-278ENST00000515233 CASP7P55210 303 aa19.23■□□□□ 0.67
DDR1-278ENST00000515233 FLIIQ13045 1269 aa19.23■□□□□ 0.67
DDR1-278ENST00000515233 CACNA1FO60840 1977 aa19.23■□□□□ 0.67
DDR1-278ENST00000515233 LINS1Q8NG48 757 aa19.22■□□□□ 0.67
DDR1-278ENST00000515233 MXD3Q9BW11 206 aa19.22■□□□□ 0.67
DDR1-278ENST00000515233 MYH16Q9H6N6 1097 aa19.22■□□□□ 0.67
DDR1-278ENST00000515233 ZNF804BA4D1E1 1349 aa19.22■□□□□ 0.67
DDR1-278ENST00000515233 TTLL5Q6EMB2 1281 aa19.21■□□□□ 0.67
DDR1-278ENST00000515233 MOB2Q70IA6 237 aa19.21■□□□□ 0.67
DDR1-278ENST00000515233 DNAAF4Q8WXU2 420 aa19.21■□□□□ 0.67
DDR1-278ENST00000515233 MPHOSPH8Q99549 860 aa19.21■□□□□ 0.67
DDR1-278ENST00000515233 SCAF8Q9UPN6 1271 aaKnown RBP19.21■□□□□ 0.67
DDR1-278ENST00000515233 PRAMEF18Q5VWM3 479 aa19.2■□□□□ 0.66
DDR1-278ENST00000515233 UBE2Q2LH0YL09 131 aa19.19■□□□□ 0.66
DDR1-278ENST00000515233 VAMP4O75379 141 aa19.19■□□□□ 0.66
DDR1-278ENST00000515233 NF2P35240 595 aa19.19■□□□□ 0.66
DDR1-278ENST00000515233 FKBP5Q13451 457 aaPredicted RBP19.19■□□□□ 0.66
DDR1-278ENST00000515233 FBXW7Q969H0 707 aa19.19■□□□□ 0.66
DDR1-278ENST00000515233 TM4SF4P48230 202 aa19.18■□□□□ 0.66
DDR1-278ENST00000515233 CHRNDQ07001 517 aa19.18■□□□□ 0.66
DDR1-278ENST00000515233 CTU1Q7Z7A3 348 aaKnown RBP19.18■□□□□ 0.66
DDR1-278ENST00000515233 WDR63Q8IWG1 891 aa19.18■□□□□ 0.66
DDR1-278ENST00000515233 ZBED3Q96IU2 234 aaPredicted RBP19.18■□□□□ 0.66
DDR1-278ENST00000515233 HDAC9Q9UKV0 1011 aa19.18■□□□□ 0.66
DDR1-278ENST00000515233 KLRK1P26718 216 aa19.17■□□□□ 0.66
DDR1-278ENST00000515233 GTF2IP78347 998 aa19.17■□□□□ 0.66
DDR1-278ENST00000515233 C15orf52Q6ZUT6 534 aaKnown RBP19.17■□□□□ 0.66
DDR1-278ENST00000515233 CD209Q9NNX6 404 aa19.17■□□□□ 0.66
DDR1-278ENST00000515233 FANCIQ9NVI1 1328 aa19.17■□□□□ 0.66
DDR1-278ENST00000515233 ANKRD18BA2A2Z9 1011 aa19.16■□□□□ 0.66
DDR1-278ENST00000515233 APOBEC3FQ8IUX4 373 aaKnown RBP19.16■□□□□ 0.66
DDR1-278ENST00000515233 KIAA0825Q8IV33 1275 aa19.16■□□□□ 0.66
DDR1-278ENST00000515233 IRS2Q9Y4H2 1338 aa19.16■□□□□ 0.66
DDR1-278ENST00000515233 SASH1O94885 1247 aa19.15■□□□□ 0.66
DDR1-278ENST00000515233 KCNJ4P48050 445 aa19.15■□□□□ 0.66
DDR1-278ENST00000515233 FOXO4P98177 505 aa19.15■□□□□ 0.66
DDR1-278ENST00000515233 TTLL12Q14166 644 aaPredicted RBP19.15■□□□□ 0.66
DDR1-278ENST00000515233 SLC34A2O95436 690 aa19.14■□□□□ 0.65
DDR1-278ENST00000515233 IFIT5Q13325 482 aaKnown RBP19.14■□□□□ 0.65
DDR1-278ENST00000515233 NOM1Q5C9Z4 860 aaKnown RBP19.14■□□□□ 0.65
DDR1-278ENST00000515233 BEND3Q5T5X7 828 aa19.14■□□□□ 0.65
DDR1-278ENST00000515233 LDLRAD1Q5T700 205 aa19.14■□□□□ 0.65
DDR1-278ENST00000515233 ARMC9Q7Z3E5 817 aa19.14■□□□□ 0.65
DDR1-278ENST00000515233 MTMR14Q8NCE2 650 aa19.14■□□□□ 0.65
DDR1-278ENST00000515233 TBC1D8O95759 1140 aa19.13■□□□□ 0.65
DDR1-278ENST00000515233 EXOSC9Q06265 439 aaKnown RBP19.13■□□□□ 0.65
DDR1-278ENST00000515233 PKN2Q16513 984 aaKnown RBP19.13■□□□□ 0.65
DDR1-278ENST00000515233 TNRC18O15417 2968 aaPredicted RBP19.12■□□□□ 0.65
DDR1-278ENST00000515233 SNAP23O00161 211 aa19.12■□□□□ 0.65
DDR1-278ENST00000515233 TAF5LO75529 589 aa19.12■□□□□ 0.65
DDR1-278ENST00000515233 IL1R1P14778 569 aa19.12■□□□□ 0.65
DDR1-278ENST00000515233 FKBP1AP62942 108 aaKnown RBP19.12■□□□□ 0.65
DDR1-278ENST00000515233 PTPN12Q05209 780 aaKnown RBP19.12■□□□□ 0.65
DDR1-278ENST00000515233 CFHR5Q9BXR6 569 aa19.12■□□□□ 0.65
DDR1-278ENST00000515233 MRS2Q9HD23 443 aa19.12■□□□□ 0.65
DDR1-278ENST00000515233 COL1A1P02452 1464 aaPredicted RBP19.11■□□□□ 0.65
DDR1-278ENST00000515233 SREBF2Q12772 1141 aa19.11■□□□□ 0.65
DDR1-278ENST00000515233 DLGAP5Q15398 846 aa19.11■□□□□ 0.65
DDR1-278ENST00000515233 CERS5Q8N5B7 392 aa19.11■□□□□ 0.65
DDR1-278ENST00000515233 ZNF296Q8WUU4 475 aaPredicted RBP19.11■□□□□ 0.65
DDR1-278ENST00000515233 DEFB129Q9H1M3 183 aa19.11■□□□□ 0.65
DDR1-278ENST00000515233 F6X3S4 739 aa19.1■□□□□ 0.65
DDR1-278ENST00000515233 MAP3K11Q16584 847 aa19.1■□□□□ 0.65
DDR1-278ENST00000515233 HELBQ8NG08 1087 aaPredicted RBP19.1■□□□□ 0.65
DDR1-278ENST00000515233 PPP2R3BQ9Y5P8 575 aa19.1■□□□□ 0.65
DDR1-278ENST00000515233 UNCXA6NJT0 531 aa19.09■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms