RNA–Protein interactions for RNA: ENST00000515005.1

SMAD5-210, Transcript of SMAD family member 5, humanhuman

TSL 1 (best)

Gene SMAD5, Length 368 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD5-210ENST00000515005 ZSWIM8A7E2V4 1837 aa15.69■□□□□ 0.1
SMAD5-210ENST00000515005 USP17L3A6NCW0 530 aa15.69■□□□□ 0.1
SMAD5-210ENST00000515005 USP17L4A6NCW7 530 aa15.69■□□□□ 0.1
SMAD5-210ENST00000515005 HSPA5P11021 654 aaKnown RBP15.69■□□□□ 0.1
SMAD5-210ENST00000515005 GJA5P36382 358 aa15.69■□□□□ 0.1
SMAD5-210ENST00000515005 SF3B3Q15393 1217 aaKnown RBP15.69■□□□□ 0.1
SMAD5-210ENST00000515005 USP17L1Q7RTZ2 530 aa15.69■□□□□ 0.1
SMAD5-210ENST00000515005 UBE2Q1Q7Z7E8 422 aa15.69■□□□□ 0.1
SMAD5-210ENST00000515005 HTATIP2Q9BUP3 242 aa15.69■□□□□ 0.1
SMAD5-210ENST00000515005 PODXL2Q9NZ53 605 aa15.69■□□□□ 0.1
SMAD5-210ENST00000515005 ZNF646O15015 1829 aaPredicted RBP15.68■□□□□ 0.1
SMAD5-210ENST00000515005 RPS8P62241 208 aaKnown RBP15.68■□□□□ 0.1
SMAD5-210ENST00000515005 ARHGEF6Q15052 776 aa15.68■□□□□ 0.1
SMAD5-210ENST00000515005 MTFR1Q15390 333 aa15.68■□□□□ 0.1
SMAD5-210ENST00000515005 MAP3K11Q16584 847 aa15.68■□□□□ 0.1
SMAD5-210ENST00000515005 HSP90AB3PQ58FF7 597 aa15.68■□□□□ 0.1
SMAD5-210ENST00000515005 ANKIB1Q9P2G1 1089 aa15.68■□□□□ 0.1
SMAD5-210ENST00000515005 STAP2Q9UGK3 403 aa15.68■□□□□ 0.1
SMAD5-210ENST00000515005 GGA1Q9UJY5 639 aa15.68■□□□□ 0.1
SMAD5-210ENST00000515005 ANKRD13DQ6ZTN6 518 aa15.67■□□□□ 0.1
SMAD5-210ENST00000515005 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.67■□□□□ 0.1
SMAD5-210ENST00000515005 PNISRQ8TF01 805 aaKnown RBP15.67■□□□□ 0.1
SMAD5-210ENST00000515005 VCANP13611 3396 aa15.67■□□□□ 0.1
SMAD5-210ENST00000515005 TESPA1A2RU30 521 aaPredicted RBP15.66■□□□□ 0.1
SMAD5-210ENST00000515005 GPR153Q6NV75 609 aa15.66■□□□□ 0.1
SMAD5-210ENST00000515005 APOBEC3FQ8IUX4 373 aaKnown RBP15.66■□□□□ 0.1
SMAD5-210ENST00000515005 OGFOD1Q8N543 542 aa15.66■□□□□ 0.1
SMAD5-210ENST00000515005 ARHGAP39Q9C0H5 1083 aa15.66■□□□□ 0.1
SMAD5-210ENST00000515005 PRDM6Q9NQX0 595 aa15.66■□□□□ 0.1
SMAD5-210ENST00000515005 SSC5DA1L4H1 1573 aa15.66■□□□□ 0.1
SMAD5-210ENST00000515005 EIF2S2P20042 333 aaKnown RBP15.65■□□□□ 0.1
SMAD5-210ENST00000515005 EIF4G2P78344 907 aaKnown RBP eCLIP15.65■□□□□ 0.1
SMAD5-210ENST00000515005 AIMP1Q12904 312 aaKnown RBP15.65■□□□□ 0.1
SMAD5-210ENST00000515005 CNGB1Q14028 1251 aaPredicted RBP15.65■□□□□ 0.1
SMAD5-210ENST00000515005 COPS6Q7L5N1 327 aa15.65■□□□□ 0.1
SMAD5-210ENST00000515005 FAM89AQ96GI7 184 aa15.65■□□□□ 0.1
SMAD5-210ENST00000515005 MTMR10Q9NXD2 777 aa15.65■□□□□ 0.1
SMAD5-210ENST00000515005 PER1O15534 1290 aaPredicted RBP15.64■□□□□ 0.09
SMAD5-210ENST00000515005 DACT2Q5SW24 774 aa15.64■□□□□ 0.09
SMAD5-210ENST00000515005 PODNQ7Z5L7 613 aa15.64■□□□□ 0.09
SMAD5-210ENST00000515005 DEFB129Q9H1M3 183 aa15.64■□□□□ 0.09
SMAD5-210ENST00000515005 PPP1R12BO60237 982 aaPredicted RBP15.63■□□□□ 0.09
SMAD5-210ENST00000515005 GJA8P48165 433 aa15.63■□□□□ 0.09
SMAD5-210ENST00000515005 TAF1CQ15572 869 aaPredicted RBP15.63■□□□□ 0.09
SMAD5-210ENST00000515005 NKX2-3Q8TAU0 364 aa15.63■□□□□ 0.09
SMAD5-210ENST00000515005 XAGE3Q8WTP9 111 aa15.63■□□□□ 0.09
SMAD5-210ENST00000515005 SEC31BQ9NQW1 1179 aa15.63■□□□□ 0.09
SMAD5-210ENST00000515005 DLG5Q8TDM6 1919 aa15.62■□□□□ 0.09
SMAD5-210ENST00000515005 U2AF1L5P0DN76 240 aaPredicted RBP15.62■□□□□ 0.09
SMAD5-210ENST00000515005 U2AF1Q01081 240 aaKnown RBP eCLIP15.62■□□□□ 0.09
SMAD5-210ENST00000515005 RTL5Q5HYW3 569 aaPredicted RBP15.62■□□□□ 0.09
SMAD5-210ENST00000515005 MS4A4AQ96JQ5 239 aa15.62■□□□□ 0.09
SMAD5-210ENST00000515005 ZFYVE28Q9HCC9 887 aa15.62■□□□□ 0.09
SMAD5-210ENST00000515005 EVI5O60447 810 aa15.61■□□□□ 0.09
SMAD5-210ENST00000515005 FBXW7Q969H0 707 aa15.61■□□□□ 0.09
SMAD5-210ENST00000515005 ZBED3Q96IU2 234 aaPredicted RBP15.61■□□□□ 0.09
SMAD5-210ENST00000515005 TTC28Q96AY4 2481 aa15.6■□□□□ 0.09
SMAD5-210ENST00000515005 COL1A1P02452 1464 aaPredicted RBP15.6■□□□□ 0.09
SMAD5-210ENST00000515005 UNCXA6NJT0 531 aa15.6■□□□□ 0.09
SMAD5-210ENST00000515005 FARP2O94887 1054 aaPredicted RBP15.6■□□□□ 0.09
SMAD5-210ENST00000515005 GJB1P08034 283 aa15.6■□□□□ 0.09
SMAD5-210ENST00000515005 BRI3BPQ8WY22 251 aa15.6■□□□□ 0.09
SMAD5-210ENST00000515005 IRS4O14654 1257 aaPredicted RBP15.59■□□□□ 0.09
SMAD5-210ENST00000515005 USP2O75604 605 aaPredicted RBP15.59■□□□□ 0.09
SMAD5-210ENST00000515005 ECM2O94769 699 aaPredicted RBP15.59■□□□□ 0.09
SMAD5-210ENST00000515005 CCL5P13501 91 aa15.59■□□□□ 0.09
SMAD5-210ENST00000515005 LACTBP83111 547 aaPredicted RBP15.59■□□□□ 0.09
SMAD5-210ENST00000515005 FAM43AQ8N2R8 423 aa15.59■□□□□ 0.09
SMAD5-210ENST00000515005 OPTNQ96CV9 577 aa15.59■□□□□ 0.09
SMAD5-210ENST00000515005 SPTBN5Q9NRC6 3674 aaKnown RBP15.59■□□□□ 0.09
SMAD5-210ENST00000515005 OTOFQ9HC10 1997 aa15.58■□□□□ 0.09
SMAD5-210ENST00000515005 ATP5J2-PTCD1G3V325 749 aa15.58■□□□□ 0.08
SMAD5-210ENST00000515005 IREB2P48200 963 aaKnown RBP15.58■□□□□ 0.08
SMAD5-210ENST00000515005 KIF22Q14807 665 aa15.58■□□□□ 0.08
SMAD5-210ENST00000515005 KIAA0825Q8IV33 1275 aa15.58■□□□□ 0.08
SMAD5-210ENST00000515005 GDF15Q99988 308 aa15.58■□□□□ 0.08
SMAD5-210ENST00000515005 RNF208Q9H0X6 261 aa15.58■□□□□ 0.08
SMAD5-210ENST00000515005 ELP3Q9H9T3 547 aa15.58■□□□□ 0.08
SMAD5-210ENST00000515005 NUDCQ9Y266 331 aa15.58■□□□□ 0.08
SMAD5-210ENST00000515005 XDHP47989 1333 aa15.58■□□□□ 0.08
SMAD5-210ENST00000515005 MYO3BQ8WXR4 1341 aa15.58■□□□□ 0.08
SMAD5-210ENST00000515005 ALPK3Q96L96 1907 aa15.58■□□□□ 0.08
SMAD5-210ENST00000515005 CCL15-CCL14A0A0B4J2E2 113 aa15.57■□□□□ 0.08
SMAD5-210ENST00000515005 ATP2B4P23634 1241 aa15.57■□□□□ 0.08
SMAD5-210ENST00000515005 BMP8BP34820 402 aa15.57■□□□□ 0.08
SMAD5-210ENST00000515005 PRMT2P55345 433 aa15.57■□□□□ 0.08
SMAD5-210ENST00000515005 CCL15Q16663 113 aa15.57■□□□□ 0.08
SMAD5-210ENST00000515005 NBPF12Q5TAG4 269 aaPredicted RBP15.57■□□□□ 0.08
SMAD5-210ENST00000515005 STRIP1Q5VSL9 837 aa15.57■□□□□ 0.08
SMAD5-210ENST00000515005 ANKRD13AQ8IZ07 590 aa15.57■□□□□ 0.08
SMAD5-210ENST00000515005 CNKSR2Q8WXI2 1034 aa15.57■□□□□ 0.08
SMAD5-210ENST00000515005 CFAP53Q96M91 514 aa15.57■□□□□ 0.08
SMAD5-210ENST00000515005 ISCA1Q9BUE6 129 aa15.57■□□□□ 0.08
SMAD5-210ENST00000515005 GNRH1P01148 92 aa15.56■□□□□ 0.08
SMAD5-210ENST00000515005 COL9A1P20849 921 aa15.56■□□□□ 0.08
SMAD5-210ENST00000515005 CTGFP29279 349 aa15.56■□□□□ 0.08
SMAD5-210ENST00000515005 BCAMP50895 628 aa15.56■□□□□ 0.08
SMAD5-210ENST00000515005 SUPT20HL1Q3ZLR7 823 aa15.56■□□□□ 0.08
SMAD5-210ENST00000515005 U2AF1L4Q8WU68 220 aaKnown RBP15.56■□□□□ 0.08
SMAD5-210ENST00000515005 TLR2O60603 784 aa15.55■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms