RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 C12orf49Q9H741 205 aa8.71□□□□□ -1.02
HMGCS1-207ENST00000514610 METTL12A8MUP2 240 aa8.7□□□□□ -1.02
HMGCS1-207ENST00000514610 OIP5O43482 229 aa8.7□□□□□ -1.02
HMGCS1-207ENST00000514610 SORBS3O60504 671 aa8.7□□□□□ -1.02
HMGCS1-207ENST00000514610 RECKO95980 971 aa8.7□□□□□ -1.02
HMGCS1-207ENST00000514610 CELA2BP08218 269 aaPredicted RBP8.7□□□□□ -1.02
HMGCS1-207ENST00000514610 VAMP1P23763 118 aa8.7□□□□□ -1.02
HMGCS1-207ENST00000514610 PSAPL1Q6NUJ1 521 aa8.7□□□□□ -1.02
HMGCS1-207ENST00000514610 CCNJLQ8IV13 435 aa8.7□□□□□ -1.02
HMGCS1-207ENST00000514610 EDARADDQ8WWZ3 215 aa8.7□□□□□ -1.02
HMGCS1-207ENST00000514610 NXPE3Q969Y0 559 aa8.7□□□□□ -1.02
HMGCS1-207ENST00000514610 FRMD6Q96NE9 622 aa8.7□□□□□ -1.02
HMGCS1-207ENST00000514610 SMG9Q9H0W8 520 aaKnown RBP8.7□□□□□ -1.02
HMGCS1-207ENST00000514610 LIN7BQ9HAP6 207 aa8.7□□□□□ -1.02
HMGCS1-207ENST00000514610 ABCB6Q9NP58 842 aa8.7□□□□□ -1.02
HMGCS1-207ENST00000514610 FAM181BA6NEQ2 426 aa8.69□□□□□ -1.02
HMGCS1-207ENST00000514610 E9PSI1 815 aa8.69□□□□□ -1.02
HMGCS1-207ENST00000514610 ALBP02768 609 aa8.69□□□□□ -1.02
HMGCS1-207ENST00000514610 CTSHP09668 335 aa8.69□□□□□ -1.02
HMGCS1-207ENST00000514610 BCRP11274 1271 aa8.69□□□□□ -1.02
HMGCS1-207ENST00000514610 EIF4BP23588 611 aaKnown RBP8.69□□□□□ -1.02
HMGCS1-207ENST00000514610 PRPF40BQ6NWY9 871 aaKnown RBP8.69□□□□□ -1.02
HMGCS1-207ENST00000514610 C20orf204Q6ZNR8 217 aa8.69□□□□□ -1.02
HMGCS1-207ENST00000514610 TMEM102Q8N9M5 508 aaPredicted RBP8.69□□□□□ -1.02
HMGCS1-207ENST00000514610 GALNT6Q8NCL4 622 aa8.69□□□□□ -1.02
HMGCS1-207ENST00000514610 POP1Q99575 1024 aaKnown RBP8.69□□□□□ -1.02
HMGCS1-207ENST00000514610 BHLHE41Q9C0J9 482 aaPredicted RBP8.69□□□□□ -1.02
HMGCS1-207ENST00000514610 VTI1BQ9UEU0 232 aa8.69□□□□□ -1.02
HMGCS1-207ENST00000514610 PDE2AO00408 941 aaPredicted RBP8.68□□□□□ -1.02
HMGCS1-207ENST00000514610 GIPC1O14908 333 aa8.68□□□□□ -1.02
HMGCS1-207ENST00000514610 GRIA4P48058 902 aa8.68□□□□□ -1.02
HMGCS1-207ENST00000514610 CEP135Q66GS9 1140 aa8.68□□□□□ -1.02
HMGCS1-207ENST00000514610 ELMSAN1Q6PJG2 1045 aa8.68□□□□□ -1.02
HMGCS1-207ENST00000514610 NUDT8Q8WV74 236 aa8.68□□□□□ -1.02
HMGCS1-207ENST00000514610 MRS2Q9HD23 443 aa8.68□□□□□ -1.02
HMGCS1-207ENST00000514610 FRRS1LQ9P0K9 344 aa8.68□□□□□ -1.02
HMGCS1-207ENST00000514610 TRIM33Q9UPN9 1127 aa8.68□□□□□ -1.02
HMGCS1-207ENST00000514610 USP17L7P0C7H9 530 aa8.67□□□□□ -1.02
HMGCS1-207ENST00000514610 ALAS2P22557 587 aa8.67□□□□□ -1.02
HMGCS1-207ENST00000514610 GRIK5Q16478 980 aa8.67□□□□□ -1.02
HMGCS1-207ENST00000514610 SPRED3Q2MJR0 410 aa8.67□□□□□ -1.02
HMGCS1-207ENST00000514610 C3orf58Q8NDZ4 430 aa8.67□□□□□ -1.02
HMGCS1-207ENST00000514610 BTBD6Q96KE9 485 aa8.67□□□□□ -1.02
HMGCS1-207ENST00000514610 BACH2Q9BYV9 841 aa8.67□□□□□ -1.02
HMGCS1-207ENST00000514610 RBSNQ9H1K0 784 aa8.67□□□□□ -1.02
HMGCS1-207ENST00000514610 TMEM238LA0A1B0GVL6 79 aa8.66□□□□□ -1.02
HMGCS1-207ENST00000514610 TSNAXIP1Q2TAA8 658 aa8.66□□□□□ -1.02
HMGCS1-207ENST00000514610 ZNF385CQ66K41 422 aaPredicted RBP8.66□□□□□ -1.02
HMGCS1-207ENST00000514610 C8orf86Q6ZUL3 223 aa8.66□□□□□ -1.02
HMGCS1-207ENST00000514610 CHSY3Q70JA7 882 aa8.66□□□□□ -1.02
HMGCS1-207ENST00000514610 MICALL1Q8N3F8 863 aa8.66□□□□□ -1.02
HMGCS1-207ENST00000514610 TRAK1Q9UPV9 953 aa8.66□□□□□ -1.02
HMGCS1-207ENST00000514610 SMNDC1O75940 238 aaKnown RBP eCLIP8.65□□□□□ -1.02
HMGCS1-207ENST00000514610 FCGRTP55899 365 aa8.65□□□□□ -1.02
HMGCS1-207ENST00000514610 TTC9Q92623 222 aa8.65□□□□□ -1.02
HMGCS1-207ENST00000514610 SRCIN1Q9C0H9 1055 aa8.65□□□□□ -1.02
HMGCS1-207ENST00000514610 LRRC4BQ9NT99 713 aa8.65□□□□□ -1.02
HMGCS1-207ENST00000514610 FAM8A1Q9UBU6 413 aa8.65□□□□□ -1.02
HMGCS1-207ENST00000514610 M0R082 166 aa8.64□□□□□ -1.03
HMGCS1-207ENST00000514610 RGS9O75916 674 aaPredicted RBP8.64□□□□□ -1.03
HMGCS1-207ENST00000514610 HOXB4P17483 251 aaPredicted RBP8.64□□□□□ -1.03
HMGCS1-207ENST00000514610 MEI1Q5TIA1 1274 aa8.64□□□□□ -1.03
HMGCS1-207ENST00000514610 ZNF417Q8TAU3 575 aa8.64□□□□□ -1.03
HMGCS1-207ENST00000514610 ASAP3Q8TDY4 903 aa8.64□□□□□ -1.03
HMGCS1-207ENST00000514610 CRELD1Q96HD1 420 aa8.64□□□□□ -1.03
HMGCS1-207ENST00000514610 ZNF587Q96SQ5 575 aaPredicted RBP8.64□□□□□ -1.03
HMGCS1-207ENST00000514610 LACRTQ9GZZ8 138 aa8.64□□□□□ -1.03
HMGCS1-207ENST00000514610 MUC3BQ9H195 1237 aa8.64□□□□□ -1.03
HMGCS1-207ENST00000514610 JPH1Q9HDC5 661 aaPredicted RBP8.64□□□□□ -1.03
HMGCS1-207ENST00000514610 A0A096LPE4 126 aa8.63□□□□□ -1.03
HMGCS1-207ENST00000514610 A0A1W2PPZ6 126 aa8.63□□□□□ -1.03
HMGCS1-207ENST00000514610 ITPKAP23677 461 aa8.63□□□□□ -1.03
HMGCS1-207ENST00000514610 GDF6Q6KF10 455 aaPredicted RBP8.63□□□□□ -1.03
HMGCS1-207ENST00000514610 KANK3Q6NY19 840 aa8.63□□□□□ -1.03
HMGCS1-207ENST00000514610 ADAM19Q9H013 955 aa8.63□□□□□ -1.03
HMGCS1-207ENST00000514610 SH2B1Q9NRF2 756 aaPredicted RBP8.63□□□□□ -1.03
HMGCS1-207ENST00000514610 IGSF5Q9NSI5 407 aa8.63□□□□□ -1.03
HMGCS1-207ENST00000514610 SOX13Q9UN79 622 aa8.63□□□□□ -1.03
HMGCS1-207ENST00000514610 GSTT1P30711 240 aa8.62□□□□□ -1.03
HMGCS1-207ENST00000514610 BAG6P46379 1132 aa8.62□□□□□ -1.03
HMGCS1-207ENST00000514610 AFF1P51825 1210 aaKnown RBP8.62□□□□□ -1.03
HMGCS1-207ENST00000514610 COL9A3Q14050 684 aaPredicted RBP8.62□□□□□ -1.03
HMGCS1-207ENST00000514610 BCL11AQ9H165 835 aa8.62□□□□□ -1.03
HMGCS1-207ENST00000514610 ARHGEF15O94989 841 aa8.61□□□□□ -1.03
HMGCS1-207ENST00000514610 PTPRAP18433 802 aa8.61□□□□□ -1.03
HMGCS1-207ENST00000514610 DTHD1Q6ZMT9 781 aa8.61□□□□□ -1.03
HMGCS1-207ENST00000514610 VN1R5Q7Z5H4 357 aa8.61□□□□□ -1.03
HMGCS1-207ENST00000514610 BSNDQ8WZ55 320 aa8.61□□□□□ -1.03
HMGCS1-207ENST00000514610 ZNF576Q9H609 170 aa8.61□□□□□ -1.03
HMGCS1-207ENST00000514610 LILRB5O75023 590 aa8.6□□□□□ -1.03
HMGCS1-207ENST00000514610 EPHA1P21709 976 aa8.6□□□□□ -1.03
HMGCS1-207ENST00000514610 AMPD1P23109 780 aa8.6□□□□□ -1.03
HMGCS1-207ENST00000514610 DGKGP49619 791 aa8.6□□□□□ -1.03
HMGCS1-207ENST00000514610 FAAP100Q0VG06 881 aa8.6□□□□□ -1.03
HMGCS1-207ENST00000514610 SVOPQ8N4V2 548 aa8.6□□□□□ -1.03
HMGCS1-207ENST00000514610 TMEM87AQ8NBN3 555 aa8.6□□□□□ -1.03
HMGCS1-207ENST00000514610 PRDM6Q9NQX0 595 aa8.6□□□□□ -1.03
HMGCS1-207ENST00000514610 PPP4R2Q9NY27 417 aa8.6□□□□□ -1.03
HMGCS1-207ENST00000514610 AKAP2Q9Y2D5 859 aa8.6□□□□□ -1.03
HMGCS1-207ENST00000514610 XRCC5P13010 732 aaKnown RBP8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms