RNA–Protein interactions for RNA: ENST00000514497.6

SNCAIP-220, Transcript of synuclein alpha interacting protein, humanhuman

TSL 5

Gene SNCAIP, Length 468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCAIP-220ENST00000514497 KIF1BPQ96EK5 621 aa20.52■□□□□ 0.88
SNCAIP-220ENST00000514497 LTBP1Q14766 1721 aa20.52■□□□□ 0.88
SNCAIP-220ENST00000514497 NUCB1Q02818 461 aa20.51■□□□□ 0.87
SNCAIP-220ENST00000514497 CYP4F22Q6NT55 531 aa20.51■□□□□ 0.87
SNCAIP-220ENST00000514497 LDHAL6AQ6ZMR3 332 aa20.51■□□□□ 0.87
SNCAIP-220ENST00000514497 C3orf67Q6ZVT6 689 aa20.51■□□□□ 0.87
SNCAIP-220ENST00000514497 ANKRD18AQ8IVF6 992 aa20.51■□□□□ 0.87
SNCAIP-220ENST00000514497 MPHOSPH8Q99549 860 aa20.51■□□□□ 0.87
SNCAIP-220ENST00000514497 LRRCC1Q9C099 1032 aa20.51■□□□□ 0.87
SNCAIP-220ENST00000514497 TRPM7Q96QT4 1865 aa20.5■□□□□ 0.87
SNCAIP-220ENST00000514497 BBOX1O75936 387 aa20.5■□□□□ 0.87
SNCAIP-220ENST00000514497 SRGNP10124 158 aa20.5■□□□□ 0.87
SNCAIP-220ENST00000514497 RPS8P62241 208 aaKnown RBP20.5■□□□□ 0.87
SNCAIP-220ENST00000514497 OS9Q13438 667 aaPredicted RBP20.5■□□□□ 0.87
SNCAIP-220ENST00000514497 MASTLQ96GX5 879 aa20.5■□□□□ 0.87
SNCAIP-220ENST00000514497 BSDC1Q9NW68 430 aaPredicted RBP20.5■□□□□ 0.87
SNCAIP-220ENST00000514497 EXOC6BQ9Y2D4 811 aa20.5■□□□□ 0.87
SNCAIP-220ENST00000514497 STYK1Q6J9G0 422 aa20.49■□□□□ 0.87
SNCAIP-220ENST00000514497 CCDC85AQ96PX6 553 aaPredicted RBP20.49■□□□□ 0.87
SNCAIP-220ENST00000514497 SEC31BQ9NQW1 1179 aa20.49■□□□□ 0.87
SNCAIP-220ENST00000514497 PA2G4Q9UQ80 394 aaKnown RBP20.49■□□□□ 0.87
SNCAIP-220ENST00000514497 MROH5Q6ZUA9 1318 aa20.49■□□□□ 0.87
SNCAIP-220ENST00000514497 SPEF2Q9C093 1822 aa20.48■□□□□ 0.87
SNCAIP-220ENST00000514497 TAF1P21675 1872 aa20.48■□□□□ 0.87
SNCAIP-220ENST00000514497 DGKZQ13574 1117 aa20.48■□□□□ 0.87
SNCAIP-220ENST00000514497 GRAPQ13588 217 aa20.48■□□□□ 0.87
SNCAIP-220ENST00000514497 GRAPLQ8TC17 118 aaPredicted RBP20.48■□□□□ 0.87
SNCAIP-220ENST00000514497 RHPN1Q8TCX5 695 aa20.48■□□□□ 0.87
SNCAIP-220ENST00000514497 CNNM1Q9NRU3 951 aa20.48■□□□□ 0.87
SNCAIP-220ENST00000514497 RIPOR2Q9Y4F9 1068 aa20.48■□□□□ 0.87
SNCAIP-220ENST00000514497 ANKRD45Q5TZF3 282 aa20.47■□□□□ 0.87
SNCAIP-220ENST00000514497 ATG9AQ7Z3C6 839 aa20.47■□□□□ 0.87
SNCAIP-220ENST00000514497 CHD1LQ86WJ1 897 aa20.47■□□□□ 0.87
SNCAIP-220ENST00000514497 KLHDC4Q8TBB5 520 aa20.47■□□□□ 0.87
SNCAIP-220ENST00000514497 ZNF594Q96JF6 807 aaPredicted RBP20.47■□□□□ 0.87
SNCAIP-220ENST00000514497 GPR108Q9NPR9 543 aa20.47■□□□□ 0.87
SNCAIP-220ENST00000514497 CCDC93Q567U6 631 aa20.46■□□□□ 0.87
SNCAIP-220ENST00000514497 SIL1Q9H173 461 aa20.46■□□□□ 0.87
SNCAIP-220ENST00000514497 ZNF277Q9NRM2 450 aaPredicted RBP20.46■□□□□ 0.87
SNCAIP-220ENST00000514497 CEP126Q9P2H0 1117 aa20.46■□□□□ 0.87
SNCAIP-220ENST00000514497 CA12O43570 354 aa20.45■□□□□ 0.86
SNCAIP-220ENST00000514497 AOC2O75106 756 aa20.45■□□□□ 0.86
SNCAIP-220ENST00000514497 SASH1O94885 1247 aa20.45■□□□□ 0.86
SNCAIP-220ENST00000514497 MAP2K2P36507 400 aa20.45■□□□□ 0.86
SNCAIP-220ENST00000514497 FMR1Q06787 632 aaKnown RBP eCLIP20.45■□□□□ 0.86
SNCAIP-220ENST00000514497 CLASRPQ8N2M8 674 aaKnown RBP20.45■□□□□ 0.86
SNCAIP-220ENST00000514497 AKAP2Q9Y2D5 859 aa20.45■□□□□ 0.86
SNCAIP-220ENST00000514497 FKBP4Q02790 459 aaKnown RBP eCLIP20.44■□□□□ 0.86
SNCAIP-220ENST00000514497 CELF1Q92879 486 aaKnown RBP20.44■□□□□ 0.86
SNCAIP-220ENST00000514497 GRIPAP1Q4V328 841 aa20.43■□□□□ 0.86
SNCAIP-220ENST00000514497 LRRC24Q50LG9 513 aa20.43■□□□□ 0.86
SNCAIP-220ENST00000514497 PUS3Q9BZE2 481 aaKnown RBP20.43■□□□□ 0.86
SNCAIP-220ENST00000514497 ANKRD2Q9GZV1 360 aa20.43■□□□□ 0.86
SNCAIP-220ENST00000514497 A0A1B0GUL6 1792 aa20.43■□□□□ 0.86
SNCAIP-220ENST00000514497 LRRC37AA6NMS7 1700 aa20.42■□□□□ 0.86
SNCAIP-220ENST00000514497 METTL24Q5JXM2 366 aa20.42■□□□□ 0.86
SNCAIP-220ENST00000514497 PRPF38BQ5VTL8 546 aaKnown RBP20.42■□□□□ 0.86
SNCAIP-220ENST00000514497 GPC2Q8N158 579 aa20.42■□□□□ 0.86
SNCAIP-220ENST00000514497 C7orf43Q8WVR3 580 aa20.42■□□□□ 0.86
SNCAIP-220ENST00000514497 TMX4Q9H1E5 349 aaPredicted RBP20.42■□□□□ 0.86
SNCAIP-220ENST00000514497 TLL2Q9Y6L7 1015 aa20.42■□□□□ 0.86
SNCAIP-220ENST00000514497 PDE8BO95263 885 aa20.41■□□□□ 0.86
SNCAIP-220ENST00000514497 CST9Q5W186 159 aa20.41■□□□□ 0.86
SNCAIP-220ENST00000514497 SP8Q8IXZ3 490 aa20.41■□□□□ 0.86
SNCAIP-220ENST00000514497 MINPP1Q9UNW1 487 aa20.41■□□□□ 0.86
SNCAIP-220ENST00000514497 FZD9O00144 591 aa20.4■□□□□ 0.86
SNCAIP-220ENST00000514497 TFCP2Q12800 502 aa20.4■□□□□ 0.86
SNCAIP-220ENST00000514497 CC2D2BQ6DHV5 1058 aa20.4■□□□□ 0.86
SNCAIP-220ENST00000514497 VGLL2Q8N8G2 317 aa20.4■□□□□ 0.86
SNCAIP-220ENST00000514497 APBB1O00213 710 aa20.39■□□□□ 0.85
SNCAIP-220ENST00000514497 SOX10P56693 466 aa20.39■□□□□ 0.85
SNCAIP-220ENST00000514497 CHRNDQ07001 517 aa20.39■□□□□ 0.85
SNCAIP-220ENST00000514497 LNPKQ9C0E8 428 aa20.39■□□□□ 0.85
SNCAIP-220ENST00000514497 ATP6V0A2Q9Y487 856 aa20.39■□□□□ 0.85
SNCAIP-220ENST00000514497 COL4A1P02462 1669 aa20.38■□□□□ 0.85
SNCAIP-220ENST00000514497 TRAF5O00463 557 aa20.38■□□□□ 0.85
SNCAIP-220ENST00000514497 PPEF1O14829 653 aaPredicted RBP20.38■□□□□ 0.85
SNCAIP-220ENST00000514497 LMOD1P29536 600 aaPredicted RBP20.38■□□□□ 0.85
SNCAIP-220ENST00000514497 IARSP41252 1262 aaKnown RBP20.38■□□□□ 0.85
SNCAIP-220ENST00000514497 UBE4AQ14139 1066 aa20.38■□□□□ 0.85
SNCAIP-220ENST00000514497 PUM3Q15397 648 aaKnown RBP20.38■□□□□ 0.85
SNCAIP-220ENST00000514497 TNNI3KQ59H18 835 aa20.38■□□□□ 0.85
SNCAIP-220ENST00000514497 RTKN2Q8IZC4 609 aa20.38■□□□□ 0.85
SNCAIP-220ENST00000514497 FPGT-TNNI3KV9GXZ4 949 aa20.38■□□□□ 0.85
SNCAIP-220ENST00000514497 ARAP2Q8WZ64 1704 aa20.37■□□□□ 0.85
SNCAIP-220ENST00000514497 IFIT2P09913 472 aaKnown RBP20.37■□□□□ 0.85
SNCAIP-220ENST00000514497 OLFM4Q6UX06 510 aa20.37■□□□□ 0.85
SNCAIP-220ENST00000514497 LPIN2Q92539 896 aa20.37■□□□□ 0.85
SNCAIP-220ENST00000514497 IL1RAPL2Q9NP60 686 aa20.37■□□□□ 0.85
SNCAIP-220ENST00000514497 PODXL2Q9NZ53 605 aa20.37■□□□□ 0.85
SNCAIP-220ENST00000514497 LEMD3Q9Y2U8 911 aa20.37■□□□□ 0.85
SNCAIP-220ENST00000514497 GJA3Q9Y6H8 435 aa20.37■□□□□ 0.85
SNCAIP-220ENST00000514497 XDHP47989 1333 aa20.36■□□□□ 0.85
SNCAIP-220ENST00000514497 SMARCA5O60264 1052 aaPredicted RBP20.36■□□□□ 0.85
SNCAIP-220ENST00000514497 EAF2Q96CJ1 260 aaPredicted RBP20.36■□□□□ 0.85
SNCAIP-220ENST00000514497 GPATCH3Q96I76 525 aa20.36■□□□□ 0.85
SNCAIP-220ENST00000514497 OSBPL3Q9H4L5 887 aa20.36■□□□□ 0.85
SNCAIP-220ENST00000514497 ZNF609O15014 1411 aa20.36■□□□□ 0.85
SNCAIP-220ENST00000514497 AOX1Q06278 1338 aa20.35■□□□□ 0.85
SNCAIP-220ENST00000514497 TTC41PQ6P2S7 1318 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms